Micropterus salmoides (largemouth bass): 119892242
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Entry
119892242 CDS
T07309
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119892242 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119892242 (loxhd1b)
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119892242 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Other domain-containing proteins
Others
119892242 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
DUF7755
ATS3
DUF6266
Motif
Other DBs
NCBI-GeneID:
119892242
NCBI-ProteinID:
XP_038560345
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MKTLTKEKYTFPCERWLDTNEDDNEVVRELPATGELIAEPLPLIKYRVTVCTGTIGGSGT
DASVFVNLIGDQGDTGDRQLVNCKNNVNKFEKGNMDEFIVEAVAIGQIRRVRIGHDSKGG
GCGWFLDKVVVREEGQAEAQAIEFPCNRWLDPNEDDGQIVRELVPFADGQRLYNIAYNIA
VKTGNIPGGSSDSNVFVKLYGDKGDTGKMMLVVSSNNLGNYFETGRVDIFTVETSDIGQI
NRLLIGHTNEGMRAGWFLDSVQIMVPVHGKHYMFPSHRWLDEDEADSKTEVEIYPSEILD
MEQLINYEITVVTGDVMFAGTNARVFIQIYGDKGKTEIITLKSRSNNFERNTTEIFKIEA
KDVGKIFKVRIGHDGSGIGSGWFLETVDVKHLIMALMPKEKKKDDKKKKKKKKKDEEDED
EEEGNEMQEVVLTYHFPCSRWLAGGEEDGELVVELLPEDSEELEVNTYEVCVFTGKMQGA
GTDGNAFINIYGENGDTGERYLRNSDNLNKFERGQEDVFIVTAVDLGPLKKLRIRHDNTQ
PHSSWYLDRVEIVDTKDDTTYYFPCNRWLAVDEDDGQLARELVPVDEAFMRKDEDEDDEG
TGATLGLEQKSMSTTYTIKVKTGEKKHAGTDANVFAILFGENDDTGIVNLKACKNYKNKF
EQGMINEFTVEAVDLGDLEKLRIGHDNSGGSAGWFLDWVEVDAPSQGQRLRFPCGRWLDK
GEDDGAIVRDLYPAELQTELYMPFVPYEIKIFTSDVFGAGTDADVFIVLYGGKGVCTQQK
HLCVNKRERRLYFERGAEDMFIVELEDVGDIIEKIRIGHDNRGTNPGWHLDRVEIRRQLR
KGKGSETTIFPCESWLAKSEGDGETVRELVPSEIITQKLLRDGKLKTTETEVEDALETHT
YKVSVRTGDMFGAGTDANVFLTIYGDLGDTGERKLAKSENNKNKFERGEVDKFTIEAVDL
GQVFKIRIRHDNSMIGADWYLDQVEVLDEDTEEVYMFLCERWLSTKKEDKRIERTFFVKG
YEGERHPDPFAKNMAQAKLGLDRNANKKKKKKKVAVMEEGPIIPYHFTLSTGVDRDASTT
ARVYVIIIGPNDVETDRLWLDLPEGKKSFTAGTMEHFVCYGTDVGEIKRVELGHNGVTPE
SCWLVDELSVAVPTKGIKYIFPCKCWLAKDRGDGLTARLFNVLDSSTINIIRKVVYSATV
VTGDTQYAGTDTNIFLTVYGANGSTEEMLLPKKEDRFERGQEDTFSLEIDDIAPLKKIRV
RIDGSGSRPDWFLDRILMRNLTTEEVYLFTYENWLSKTKGPKRTKACELAAVVDDEEMVE
KTTYIIQVQTSDVGGAGTDANVFLMVFGEYGDTGTLPLKESSNRNKFERKAKDVFRFSDM
LSVGELSKVRVWHDNKGPAPGWHLEYIDVKDEAMDQTFRFPCDRWLAKNEDDGQIMRELA
CANNDSIDLSDKTKYEIATTTANTDDASTTENAWIVLEGRKARSKEFVLENKKKKFLCGA
TDTFEFSSKHVGEIAGICLGHITKDGKKVKNEAFWHVMEVVVTERELGNKYFFHCDAKIP
LAAKKDQFLTFECFKSIESFASRVRNLVPVKYEIIIITGDVKGAGTDANVFITVYGINGD
SGKRHLRQKFRNLFERGRTDRFVLEMLDLGELLRVKVEHDNNGSNCGWYLECVEVTNTAN
SVTTIFNCGNWLDTSKADGQIQRVLYPKY
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattaacaaaggagaagtatacgtttccttgtgagcgttggctggacacaaat
gaagatgataacgaagtcgtgagggagctacctgccaccggagaactaatcgctgagccg
ctgcccttaatcaaatacagagtgactgtttgcacggggactatcggcggcagcggcaca
gatgcatccgtttttgttaatctgattggagaccagggggacaccggagatcggcagctg
gtcaactgcaaaaacaatgtcaacaagtttgagaaaggaaacatggatgagtttatagtc
gaggcggtagccatcgggcagatccgcagggtgaggattggacatgacagtaaaggtgga
ggctgcggctggttccttgataaagtggttgtaagagaggaaggacaggctgaggctcag
gctatagagttcccctgcaacaggtggctggaccccaacgaggatgatggacaaattgtt
agagagttggtgccattcgcagatggacagcgtctttacaacattgcctacaacattgca
gtaaagacaggtaacatccctgggggcagttcagactccaacgtgtttgtcaagctctac
ggagacaaaggcgacaccggtaagatgatgctggtggtctcttccaacaacctgggtaac
tactttgagacgggtcgcgttgacatcttcacggtggaaacctctgatattggacagatc
aaccgtctcctgattggccacaccaacgaaggcatgcgtgcaggctggttcttggacagc
gttcagatcatggttccagtccatggcaagcattacatgttccccagtcaccgctggctg
gatgaggatgaggctgacagcaagacggaggtggagatttacccaagtgagatcctggac
atggagcaactaattaactatgagataacagtagtgaccggagatgtgatgtttgctggc
accaacgccagagtgttcatccagatctacggggacaaagggaagacagaaattatcaca
ctcaaaagcagatccaacaactttgagcggaacaccacagaaatatttaagatagaggct
aaagatgtgggcaagatcttcaaggtccgcatcggtcacgatggctcagggatcggatct
ggctggttcctggagacagtggatgtcaaacatctaatcatggccttgatgcccaaagag
aagaaaaaggacgacaagaaaaagaagaagaaaaagaagaaagatgaagaagatgaggac
gaggaggaaggaaacgagatgcaggaagtggtgctgacttatcacttcccctgctcccgc
tggctggctgggggtgaggaggatggcgagctggtggtggagctgctgcctgaggattca
gaggagctggaagtcaacacctatgaagtgtgcgtcttcactgggaagatgcagggtgct
gggacagacggcaacgccttcattaatatttatggagaaaacggagacactggagagcgc
tatctgaggaactctgacaacctcaacaaatttgagcgggggcaggaggatgttttcatt
gtgacagctgttgatctgggtcctctgaagaagctacggatccgtcacgacaacactcag
cctcattcatcttggtacctggatcgtgttgagatagtggacacaaaggatgatacaacg
tactatttcccttgtaaccgctggctggcagtggatgaggatgatggacagctagcaaga
gagttggtgcctgtggacgaagccttcatgaggaaggatgaggacgaggatgatgagggg
acaggggccactctggggctggagcaaaaatccatgtctactacatatactatcaaagta
aaaactggagaaaagaagcatgctggaactgatgccaacgtctttgccatcctgttcggt
gaaaatgacgacacggggattgtcaaccttaaggcttgtaaaaactataagaataagttt
gaacaggggatgatcaatgagttcactgtggaggcggtggatttgggtgacctggaaaag
cttcgaattgggcatgacaactcagggggttcagccggttggttcttggactgggttgag
gttgacgccccttcacagggtcagagactacgcttcccatgtggccgctggctggataaa
ggagaggatgatggggcaattgtgagggatctctatcccgctgagttacagaccgaactc
tacatgccatttgtgccttatgagataaagatattcaccagtgatgtgtttggtgcggga
acagacgctgacgtgttcatagtcttgtacggaggtaagggagtgtgcacacagcagaaa
cacctgtgtgtcaacaagagagagaggcgtctgtactttgagaggggagcagaggacatg
ttcattgtggagctggaggatgttggtgacattatagagaaaatcaggataggacatgac
aacaggggcaccaacccaggatggcacctcgacagagtggagattagacgacagctcagg
aaaggaaagggttcagagacgaccattttcccatgcgagtcctggctagccaaatctgaa
ggtgatggggagacggtgagggagctggtcccctcggaaatcattacacagaaactcctt
agggatgggaagctgaagacaactgaaacagaggtggaagatgctttggaaactcacaca
tacaaggtgtctgtgcggacaggtgatatgttcggagcaggaactgatgccaacgttttt
ctcaccatctatggagacctgggagacacaggagaacgcaaactcgccaaatctgagaac
aacaagaacaagttcgagagaggagaggtggacaagttcactattgaggctgtggacttg
ggccaagtgtttaagatccgtattcggcatgacaactccatgatcggggctgattggtac
cttgaccaggtggaggtgctggatgaggatacagaagaagtgtacatgttcttgtgtgag
cgctggttgtcgacgaagaaagaggacaaacgcatagagaggaccttctttgtcaagggt
tatgaaggtgaaagacaccctgatccatttgccaagaacatggctcaggccaaactgggg
ctggacagaaatgccaacaagaagaaaaagaagaaaaaggtggcagtgatggaagagggt
ccaatcatcccctatcatttcaccttgtccacgggggtggaccgtgatgccagcactaca
gccagggtctatgtcatcatcatcggccccaacgatgttgagacagaccgactgtggctg
gacctgccagagggaaagaaatccttcacagctggcaccatggagcactttgtgtgttat
ggaactgacgtaggagagatcaagagggtggaacttggccataacggtgtcacaccagag
agctgctggttggtggatgagctgtcggttgctgtgccaaccaaaggtatcaagtacatc
tttccatgtaagtgctggctggctaaagacaggggcgatggtctgactgccagactgttc
aatgtgctggactccagcacgatcaacattatccgcaaagttgtttattcggccacagtt
gtcacaggagacactcagtatgcagggactgataccaacattttcctgacggtgtatgga
gccaatgggagcacagaggaaatgctgctgcccaaaaaggaggacaggtttgaaaggggc
caagaagacacattcagtctggagatagatgacattgctcctctgaagaagatcagagtt
cggatagatggctctggaagtcgacctgactggtttcttgacaggatcctgatgcggaat
ctgaccacagaggaggtgtatctgtttacctacgagaactggctgtcaaagaccaaaggg
ccgaagaggacgaaggcatgcgagctggcagctgtggtggatgatgaggaaatggtggag
aaaacaacctacattattcaagtccaaaccagcgatgtcgggggtgcaggcaccgatgcc
aatgtgtttttgatggtgtttggggagtacggggacactggcacgctgccactgaaggag
agctcaaacaggaacaagtttgagcgaaaagcaaaagatgtgttcagattttccgatatg
ctcagtgtgggcgaactgtccaaggtccgagtgtggcacgataacaaaggccctgctcct
ggttggcacctggagtacattgacgtgaaagatgaggccatggaccagacctttaggttc
ccctgcgaccgctggctggctaaaaatgaagacgacgggcagataatgagggagctggcc
tgtgccaacaacgactctatagacctcagtgacaaaaccaaatatgaaattgccacaaca
actgctaacacagacgatgcctccaccacggaaaacgcctggatcgtgttggaaggaagg
aaagcccgttccaaggagtttgttctggagaataagaaaaagaagttcttatgcggtgcc
acagacacgtttgagttctcgtccaagcacgtgggggagattgccggcatctgcctaggc
cacataacgaaagacggaaagaaggtgaagaatgaagctttctggcacgttatggaggtg
gtagtgacagaaagggagctgggaaacaagtatttcttccactgtgatgcaaaaatcccc
ctggcagccaaaaaggaccaattcctgacatttgagtgctttaagtccatcgagagcttt
gcgagcagagtccgcaacctggtccctgtcaagtatgaaatcatcatcatcaccggggac
gtaaaaggggcgggcacagacgccaacgttttcatcacagtctatggcatcaacggtgac
tcaggcaagcgtcatctgcggcagaagttccgcaacctttttgagcgagggcgaaccgac
cgctttgttctggagatgctggacctcggggagttgctgagggtcaaagtggagcacgac
aacaacggctccaactgtgggtggtatttagagtgtgtggaggtgaccaacacagccaac
tcagtgacaacaatctttaactgtggaaattggctcgacacttctaaggccgacggccag
atccagcgggtgctctaccccaaatactga
DBGET
integrated database retrieval system
