Micropterus salmoides (largemouth bass): 119892489
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Entry
119892489 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119892489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119892489
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
RNases
119892489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zwint
KIX_2
Motif
Other DBs
NCBI-GeneID:
119892489
NCBI-ProteinID:
XP_038560685
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFPSSGLFADIICPFSKSGLCERPHCLYKHATEEVRDMCAASYKSSIVDFAGRNGYPHAV
CGAPANDDPKDGLQELERINKEIETVRHEVEQEQRRLSRYQTVQAGSTHTALNSSVSKSD
ITSKNMHRGSYGLSSSTNVTKTCSRARKYVVDNSKPRTDLEYDPLSNFSAGLRSYSSSGK
EQKVKNGQGLKRARNAVSCDQKKPVTYQAQLSRSPEPLDDSNEDCVLIIDVPPSPDEKRL
RAQKPVDSVPGKSLHDKVEVIKDAQTTNILLDTPPHLANSEVCKVSSTVEKNRVYSSCVA
ENNKGPSDLYENKGYENIPVYGHEDDITGCLEDLACESLKISNHFQAAETQVEESPEPAS
PAATTVQQDPNWNKLVVEREKTSFRLNCLRVSCLIVLRMNPVQPHHFSPKNSLFYKAPAA
NPDSPCRQHTKQALTTEQPAQNRVSNQWSSTKCVPSVWPHSQETSSKMPGQMQGKTIPPA
SYPKLAEPASGSSQGQAWHNLSASSLMNRVESSTEQLLVKEEDTEDLIIIDSSSDDENEL
NYSEMELSDSDPMEECYRIFMEANSKDQGNEEQPDVSVGSTDVEKPELNSKPQASSGKKR
VAHEARYTEPVAKSRPQPQVLVPLCGPAVSGFYSQPSTASKFQQVQQRASMLAASVKGGQ
AFVSSTCEKKPETQSAPSPAAQTLENVQPAPLQNAYINYVPLGTAVIEVGNNLHLILPEG
AFPLPVTSSSSQVTSVLTPISQVHMSTVAVKQIYHPPSVTPLQRYRTTAPVLIPAPARKP
SLTSAFALAHSNPAVSTTPQTPVHAAVKPVPTKRKLKQQCEATKDKVPHDIRQRYINMFT
EEFLKTTANVNDAFEKALAEERTVYNRSVNKLKYLSVAVNALKKLKNQSGAAVKDENDVS
SQRFKGNIPLNLKKFKGNDDMAFYESLKDYILTEEKLIESNYPVQHPEKSGCAVLFADNK
KGNADPLKRICCRCGATYSVSQTGKHTRKEECNYHYGKGVKNKVPGGVETRYSCCEGVMG
APGCQVFKLHVHDSLSLNGFVSTVRRHPSDTSCPGVYSLDCEMCYTIHGLELSRVTVVNS
SLQIIYDTFVRPDNEVIDLNTRFSGISEEDVKGNCTSLREVQETLLSFINADTILIGHGL
ETDLCALKFLHGTVVDTSVVFPHRLGPPHKLTLNNLTAEYLRRIIQESVCGHDTAEDAAA
CMELMLWKVKEDGKLKK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcatctggtctttttgctgacataatctgtcctttttcaaaaagtgggctc
tgtgagcggccacactgtttgtacaaacatgccacagaagaagtgcgggatatgtgtgct
gcctcgtataaatcatcgatagttgactttgcaggccgcaatggctatccacacgctgtc
tgtggagcaccagcgaatgatgaccccaaagatggcctccaggagctggaacggatcaat
aaggagattgaaactgtaaggcacgaggtggagcaggagcaaaggcgactgtcccggtac
cagactgtgcaggcaggcagcacacacactgcgcttaattcctctgtttccaagtctgac
attacaagtaaaaatatgcacagaggttcttatggactgtcttcatccacaaatgttact
aaaacgtgctcccgagcaaggaagtacgtggttgacaactcaaaaccaaggactgatttg
gagtatgaccctctgtccaatttttctgctggcttgcgttcttacagctcatcgggtaaa
gagcaaaaagtgaaaaatggacaaggtttgaaaagggcaagaaacgctgtatcttgtgac
caaaagaagccagtcacatatcaggctcagctttcccgatctccagagccacttgatgac
tctaacgaagactgcgtcttgattattgacgttcctccctcgcctgacgaaaagagactg
cgagctcagaaacctgttgattctgttcctggcaaatccctccatgataaagtagaggta
ataaaggacgcccaaacaacaaatattttacttgatactccaccgcaccttgcaaacagt
gaggtgtgcaaggtctcatcaacggtagaaaaaaacagagtttatagtagttgtgttgct
gaaaacaataaaggtccatctgatctttatgagaacaaaggatatgaaaatatacccgtt
tatgggcatgaagatgacataactggatgtttagaagacctggcatgtgaaagtctgaaa
attagtaatcactttcaggctgctgaaacacaagtggaggaaagtcctgaacctgcaagt
cctgctgcaaccacagtccagcaagatccaaactggaacaagctggtggtggaaagggaa
aaaacaagtttcagattgaattgcctccgtgtgagctgcctcatagtgttgagaatgaat
ccagtgcagccacatcatttttcaccaaagaattcacttttttataaagccccagccgct
aacccagactcaccatgcaggcaacacaccaagcaagccctgactacagagcagccagct
cagaacagagttagtaatcagtggtcttccacaaaatgtgtaccctcggtgtggccacat
agccaggaaacgtcaagcaaaatgccagggcagatgcagggtaaaactattccccctgca
agctacccgaagctggcagaaccagcttcaggcagcagccaaggtcaggcttggcacaat
ttgtcagcatcaagcttgatgaacagagtagagtcatcaactgagcagcttttggtgaaa
gaagaggatactgaggatttaataatcattgattccagctctgatgatgaaaatgagctc
aactattcagaaatggagctgtctgacagtgacccgatggaggaatgctacaggatcttc
atggaggcaaacagtaaggatcagggaaatgaagagcagcctgatgtgtctgttggatct
acggatgtggagaagccggagttaaacagcaaaccccaagcatcgtcaggaaagaagagg
gtggctcatgaagccagatatacagagccagtggcaaagagcagacctcagccccaggtg
ctggttcccctatgtgggcctgcggtgtcaggattttactcccagccctccaccgcctcc
aagttccagcaggtacagcagagagcctccatgctggctgcttcggttaaaggtggtcag
gcttttgtttcctccacctgtgagaagaagccagagacccagagtgcgccttctcctgcg
gctcaaacccttgaaaacgtgcagcctgctccattgcaaaatgcttacattaactacgta
cctttgggaactgctgtgatcgaagtaggcaacaacttgcacttgatcctcccagagggc
gccttccctctgcctgttacttccagctccagccaagttacttcagttctaaccccaatc
agtcaagtgcatatgagcactgtcgccgttaaacaaatataccatccaccttcagtcacc
cctctgcaaagataccgcacaacagcgcctgtgctcatccctgcgccggcacgtaaacct
tcactaacctctgcttttgcgttggcacattcaaacccggctgtttccactactcctcaa
acacctgtccatgctgctgttaagccagtgcctactaaacgtaagctgaagcagcagtgt
gaggccaccaaagacaaagtgccccatgacatccgtcagcgttatattaacatgtttacg
gaggagttcctcaaaacgacagccaatgttaacgatgcctttgagaaggctcttgctgaa
gagaggactgtgtataatcgcagtgtgaacaaactcaaatatctgagtgttgcagtgaat
gcactgaagaagctgaagaaccaaagtggtgctgctgtaaaagatgaaaatgacgtgagc
agccaaagattcaaaggcaacattccacttaacctgaagaagtttaaaggaaacgacgat
atggccttttatgagagtttaaaggactacattttgactgaggaaaagctgattgagagc
aactatcctgtccagcacccagagaaatctggttgtgctgttctttttgctgacaataag
aagggcaacgcagaccccctcaagaggatctgctgtcggtgtggggccacatactctgtg
agccaaacgggcaaacacacccgtaaggaggagtgtaactaccactatgggaaaggagtt
aaaaataaagtgccaggtggcgtggagacccgctacagttgctgtgagggcgtcatggga
gcacctggatgtcaggtgtttaagttgcatgtccacgattcgctcagcctgaatgggttt
gtgtcgaccgttcgcagacatccctcagatacgagctgtcctggggtctactccttggat
tgtgaaatgtgttataccattcacggtctggagctgtccagagtgacggtggtcaactct
agtctgcaaatcatctatgacacctttgtcagacctgataatgaggtcatcgacctcaac
accaggttttcaggcatcagtgaggaagatgtgaagggtaactgcacctccctcagagag
gtgcaggaaaccttattgagcttcatcaatgccgacaccattctgattggacacggccta
gaaacagacctctgtgccctcaagtttctccatggtacggtggtggacacatcagtggtt
ttcccccaccgtctgggcccccctcacaagctgaccctgaacaacctcactgctgaatac
ctcaggaggatcatccaagagagtgtttgtggccacgacactgcagaagacgctgctgcc
tgcatggaacttatgttatggaaggtgaaagaagatggaaaactgaaaaaatga
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integrated database retrieval system
