Micropterus salmoides (largemouth bass): 119893086
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Entry
119893086 CDS
T07309
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119893086 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119893086 (rag1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119893086 (rag1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119893086 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
TRAF3_RING
zf-RING_2
zf-C3HC4_3
zf-RING_6
U-box
Motif
Other DBs
NCBI-GeneID:
119893086
NCBI-ProteinID:
XP_038560943
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MAEESLETDGPRSSMPAELHHPHSKYSQWKFKLFRVKSMEKAPLPSETQPEKGALLGISV
TEAPNIELDNGVAPGSVMKLCLGGKSKENVEGPGRRVDMKLQEMDTHMNHLRCLCRLCGM
VLRKVKGPVHNVHEDLDESSKGALRKMGCKVTSWPEVILKVFKVDVTEDTESVHPLSFCH
RCWMAAIRGGGVCSFSRTRVPEWKPHSSLCHLCYPRKTSFQRTGRKRRKAIPRAQSLAKR
TRWDHGGSIAVGERRALRPFGDRHHTPVLRGWRKPITQREQWVRNITHCQKDHLSTKLIS
EKLPVDFLFSFTCLVCDHLLSDPVQSACGHLFCRSCIIKYTHVLGPHCPACNLPCAPDDL
TLPAKAFLSALLSLPLLCPRSGCGKQVTLDSFKAHCLGHELDEKDANEHSSELDIYLLTN
KGGRPRQHLLSLTRRAQKHRLRDLKNQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQ
ADELEALMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAE
KELLPGFHQFEWQPALKNVSTSCNVGIINGLSGWASSVDDAPADTITRRFRYDVALVSAL
KDLEEDIMEGLRESGMEDSACTSGFNVMIKESCDGMGDVSEKHGGGPVVPEKAVRYSFTI
MCVSVLADDEKEEVTIFTEPKPNSELSCKPLCLTFVDESDHETLTAVLSPIVAERKAMKE
SRLILSMGGLPRSFRFHFRATGYDEKMVREMEGLEASGSTYICTLCDSSRAEASQNMVLH
SVTRSHEENLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEF
YKIFQDEIGEVYKKVNPSREERRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTQEAVE
VVCELVPSEERREALRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQSFADLLSSTF
KYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFEL
EDVLKHHWLYTSKYLQKFMEAHKDSAKALQATIDPIENQDDEDMSLEINDF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagagcctggagacagatggccccagatcctccatgccggctgagctccac
catccccactctaagtactctcagtggaagtttaaactgtttagggtgaagtccatggag
aaggcccccctgcccagtgagacacagcctgaaaaaggagccctgttagggatctcagtt
actgaagctccaaatatagagttagataatggtgtggctccagggagcgttatgaaattg
tgcttaggaggaaaaagcaaggaaaatgtggagggcccgggccggagggtagatatgaag
cttcaggaaatggacactcacatgaaccacctcaggtgcttgtgccgtctctgtggaatg
gtcctgagaaaagtcaaagggccagtgcacaatgttcatgaggatctggatgagtcaagc
aaaggtgccctgcgtaaaatgggctgcaaggttacaagctggccagaggtcatcctcaaa
gtcttcaaagtggacgtgacagaggacacagaatctgtccaccctctttctttctgccat
cgctgctggatggctgccatacgaggagggggcgtctgcagcttctccagaacaagagtc
cctgagtggaaaccccactcttccctctgccacctttgctaccccaggaaaacttcattc
cagcggactgggaggaagaggcggaaagccatccccagagcccagagcttggcaaaaagg
acccggtgggaccatggcggcagcattgctgttggtgagagaagggctctcagaccattt
ggagaccgtcatcatactccagtgctcaggggctggaggaaacccatcacccagagagag
caatgggtgaggaatatcacccactgccagaaagaccacctgagtaccaagctgatctct
gagaagctccctgtagacttcctcttttctttcacctgcctggtgtgtgaccacctgctc
tctgatccagttcagtccgcctgtgggcacctcttctgccgcagctgtattataaaatat
acccacgttctgggacctcactgtccggcctgcaacttgccctgtgcccctgatgatctc
accctaccagccaaagccttcttatcagccctactttcgctgcccctgctctgccccaga
agtggatgtggcaagcaggtaacgctagactcatttaaagctcattgtctgggccatgag
ttggatgaaaaggatgcaaatgagcactcatcagaacttgacatttacctgctaaccaat
aaaggtggaagaccccgtcagcacttgctatcgctaacccgtcgtgcccagaagcatcgg
ctgagggatctgaagaaccaggtgaaggtgtttgcagacaaagaggaaggtggcgacctg
aagtctgtgtgtctgacgctgtttctgcttgcactgagatctgggaatgaacaccggcag
gctgatgaactagaggccttgatgcaaggcagaggctttgggttgcatcctgctgtgtgc
ttggccatccgggtcaacactttcctgagctgcagtcagtatcacaagatgtaccggact
gtcaaagccaccagtggccgccagatctttcagcccctgcacaccctgcgagctgcagag
aaggagcttctcccaggctttcaccagtttgaatggcagccagctcttaagaatgtgtct
acatcgtgcaatgttggcattattaatgggctctcaggatgggcttcctcggtggatgat
gctccagctgacactatcactcggcggtttcgctatgatgtggcactggtgtcagcatta
aaggatctggaggaggacatcatggaggggctgagagagagtgggatggaagacagtgct
tgcacttcaggcttcaatgtcatgatcaaggaatcttgtgatggcatgggtgatgtcagc
gagaagcacggtggaggaccagttgttcctgagaaggcggtacgttactctttcactatt
atgtgtgtctctgtcctggcagacgatgagaaagaagaggttaccatcttcaccgagcca
aagccaaactcagaactgtcctgtaagcccctttgtctgacatttgtggatgagtccgac
catgagacacttacagctgtcctgagccctatagttgcagaacgtaaggcaatgaaagag
agcaggctcatcctgtccatgggcggactaccacgctccttccgcttccacttcagagcc
actggatacgatgagaagatggtgcgtgagatggagggcctcgaggcctcagggtccacc
tatatctgcactctttgtgactccagtcgggcagaggcctctcaaaacatggtgctacac
tctgtcactcgcagtcatgaagagaaccttgaacgctatgaaatatggagaaccaacccc
ttttctgagtctgcagatgagctgcgagacagagtcaaaggtgtctctgccaagcccttc
atggagacccagcccacactggatgcattacactgtgacattggaaatgccactgagttt
tacaaaatcttccaggacgagatcggtgaggtatacaaaaaggtcaaccccagccgggag
gaacggcggagctggagggcagccctagataaacagctgaggaagaagatgaagctgaaa
ccggtgatgaggatgaatgggaactatgctcgcaggctaatgacccaggaggctgtggag
gtggtgtgtgagctggtgccctcagaggagaggagggaggccctgagggagcttatgagg
ctctacctccagatgaagcctgtgtggcgtgccacctgcccagccaaagagtgccctgac
cagctgtgccgctacagctttaactcccagagctttgccgacctcctctcctctaccttc
aaatacaggtacaatggaaagataaccaattacttgcacaagaccctggcccatgtgcct
gaaatcatagagagagatggatccataggagcctgggctagcgaggggaatgagtcagca
aacaaactgttcaggcgtttccgcaagatgaatgcacgccagtcaaaggcctttgaacta
gaggatgtgttgaaacatcactggctgtatacctccaagtacttgcagaagtttatggaa
gctcacaaagactctgccaaagctctgcaagctaccatcgacccgatagagaaccaggat
gatgaagacatgtctttggaaatcaatgatttttga
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integrated database retrieval system
