Micropterus salmoides (largemouth bass): 119893090
Help
Entry
119893090 CDS
T07309
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119893090 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119893090 (lrrc4ca)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
NGL family
119893090 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
ig
Ig_3
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
119893090
NCBI-ProteinID:
XP_038560949
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MLNKMTSSQKQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLREIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPSNHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSAGTWESVSPTSTTTTTVRIPLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNQHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagaagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtggca
gggctggtacgcgctcagacgtgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccggcgaggcctgcgagatgtcccagatggcatctctaccaacacacgc
tacctgaatctgcaagaaaatctcattcaagtcataaaggtggacagcttcaagcaccta
agacatctggagatcctgcagctgagcaaaaatcacatacgcaaaattgagctgggagcc
ttcaatggactagccagcctcaataccttggagctttttgataaccgcctcactactatc
ccaaacggggcatttgagtacctgtccaaactaaaggagctttggctaaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacggcggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaatcttggaatgtgcaatctgagggaaattcccaaccttattcccctggtt
aagctggatgaactggagatgtcagggaaccagctcactgtcatccgacctggctctttc
aaagggctcattcatttacagaagctatggatgatgcatgcccagatccagaccatagaa
aggaactcttttgatgacctgcagtcactagtggagctcaatctagcccataacaacctt
accctattgccccatgatctcttcactccattacatcacctcgagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtaccagcaaacacgagctgctgtgcccgctgcagctcaccctccaaccataaggggcga
tacattggtgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagagggaagcgctgcagagttgaaatgcagagccagctcc
ttgacctcagtaagctggattacacccaatggttccatcatgacacacggtgcatacaag
gtcagaatctctgtgctgaatgatggcactctgaactttaccaatgttaccatgcaggac
acaggtacttatacatgtatggtgagtaattctgcaggtaacacaacagcatctgccaca
ctcaatgtgtcctctacagagaatagtagcttcagctacttcaccacagtgacagtggag
accatagaaacgccacataatgaaggcttcaccactactgtgcaacagaaggtgggcccc
accccctctgctggtacgtgggagtctgtttcgcccacctctacaactaccaccacagtc
cggatcccactctccactcgcgccacagagaagacttacacaatccctgtcacagagctg
ggtggggagggctcactgaatggcttggatgaagtaatgaagacaaccaagatcataatt
ggctgctttgttgcaatcacactcatggcagctgtcatgctgatcatcttctacaagatg
cgcaaacagcaccaccagcagaaccagcatgcacctacacgcaccattgagatcatcaat
gtggatgaggactgtgtaacaggaggcccaggcatggagggccacctgactctgcctcct
cttgagcacgagcacctaaaccattataacacctataaaacagcatacaaccatgcctcc
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
DBGET
integrated database retrieval system
