Micropterus salmoides (largemouth bass): 119893165
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Entry
119893165 CDS
T07309
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119893165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119893165
03036 Chromosome and associated proteins [BR:
msam03036
]
119893165
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119893165
Coactivators
SAGA/TFTC/STAGA complex
119893165
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119893165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119893165
NCBI-ProteinID:
XP_038561065
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKAPAASYSDGKREAAPPAAGPFSGK
VRDPVGSLDPPQQGHPKAGLDQEPGANEPLSGKALASSTSSTAAAGAVIPAGAGLGTVGA
SPPAVPPGPGPVTLTTQSAAAVSFHRAAVLSPSAAPAAEAVRTGSPGLQSLNGSSGAAKL
VNSPAAPPAAGTGTVISSVSAGGSTIIASMASQPTFPVPQSSVASPGVALQRHPSPVATQ
NGVDPKGVQLVTQGAPASSSQVVNHSNPLMHTKMLVQSQPVSGNSVILASTPPPAAVQSP
VSQTQTGTSTAAVTLAGGKPAVNGLGQPTVAMVRPPGAPVVATSIQQQRPGLVASSPRPA
APQQTLAVRPQQQTTIQLPPGFSMPPGMVLVRTETGQLVMVPQQVLAQAQAKTQQGQTVA
NITQRPATPTAGATIRVTTATTAPQTVRLASPAQTRMVQSPTTTVQKAITVAPSGAAVPV
KMTTPQKAQTVITAGGAPVAKPAGVTSNPVNSTTPAATPPGRVNVVSQEMQENVKKCKNF
LATLIKLASHNSPSPDTSKNVKALVQDLLDAKIEPEEFTSRLQAELKSSPQPYLIPFLKK
SLPALRQSLLSNQQSLVTPTPSTSAPPLAAPGSVTTATIRPRLPVSPAGTTVRLNPPHTN
TLSSGRALVQTVQTRTPVVFNQTLRHQGTLVRGPTPTIISKSPVYLAGQANQRKLSDPGG
GTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPTGLLHRRILDT
AKKLGVTEVPLEVVNFISHATQSRLRSLLEKVSAVAQHRTDGGKDEDLHEQSSDVRSQLR
FFEQLERMEKQRKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKLDSPGSAAASAEVASGSGAGSSPAASSSRQQLRQRITRVNLRDFIF
CLEQERSTARSLMLYKALLK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaccgaggtggatgagaaagca
gttagcgacctagttggctctctggaatcacaactgggcgaccgaaaggctcccgcggct
tcttattccgacgggaaacgggaggcagctcctccggcggccggtccgttctcagggaaa
gtgcgcgatccggtggggtctctggatccgccgcaacaagggcatccgaaagcgggttta
gaccaggaaccgggcgctaatgagccgctctccggtaaagccctcgcctcctctacctcc
tctacggccgccgccggggccgtgatacccgccggagctggtctgggaacagttggagct
tctcctcccgcggttcctccgggacccggacccgtaactttgaccactcagtccgcggct
gctgttagcttccaccgggctgccgtcctgagtccgagcgcggctcccgcggcggaggcg
gtcaggaccggctctccgggattacaaagtttaaacggcagctccggagctgcaaagttg
gtgaactctcccgctgcccccccagcagccgggaccggcaccgtgataagttctgtcagc
gccggcgggtccaccatcatcgcctccatggcttcacagcccacctttcctgtacctcag
tcctccgtggcgtctcccggcgtggctctgcagaggcacccgagcccggtggccacccag
aacggggtggaccctaagggggtccagctggtgacccagggcgccccagcctccagctct
caggtcgtgaaccacagcaaccctctgatgcacaccaagatgctggttcagagccagcct
gtgtccgggaactctgtgatcctggcaagtacccctccgcctgctgcagtccagtccccc
gtcagccagactcagaccgggaccagtacagctgctgtcaccctggccggggggaagcct
gcggtgaacgggttgggccagcctacggtggccatggtgaggccgccgggcgcccccgtg
gtggccacctccatccagcagcagagacccgggctggtggcgagctcccccaggccggcg
gctcctcaacagactctggcggtccgacctcagcagcagaccaccatccagctgcccccc
gggttcagcatgccgcctggtatggttctggtccggacggagacgggtcagctggtgatg
gtccctcagcaggttctggcccaggctcaggccaagacgcagcagggccaaacggtggcc
aacatcacccagagacctgcaacgccgacggccggggccaccatccgggtcactacggct
accacggctcctcagacggtccgcctggcctcccctgctcagaccagaatggttcagtct
cccaccaccacggttcagaaggccatcacggtggcccccagcggagccgcggtgccggtg
aaaatgaccacccctcagaaggcccagacggtgataacagcgggtggggcgcctgtcgcc
aagcctgccggcgtcacgtccaaccccgtgaacagcacgacgccagccgccacgcccccc
ggcagagtcaacgtggtgtcccaggagatgcaggagaacgtgaagaaatgcaagaacttc
ctcgccacgctgatcaagctggcgtcccacaactcgccctccccagatacctccaagaat
gtgaaggccctggtgcaggacctgctcgatgcgaagatcgagcctgaggagttcacctct
cggctgcaggctgagctgaagtcctccccacagccctacctcatccccttcctcaagaaa
agcctccccgccctgcgtcagtctctgctcagcaaccagcagtctctggtgacgcccacc
cccagcacctccgcacccccgctggctgcccccggctccgtcaccaccgccaccatcagg
ccgcggctgcccgtcagtccggccggcacgaccgtcagactgaacccgccccatacaaac
actctgtcttcgggcagagctttagtccagactgttcagactcgaacgcctgttgtcttc
aaccagactctcagacatcaaggtacacttgtaaggggacccacacccactataatcagc
aaaagtcctgtttacctggcaggccaagccaatcagaggaagctgagtgacccggggggc
gggacattcagagacgacgatgacatcaatgacgtggcgtccatggctggcgtcaacctt
aacgaggaaaacgcacgtatcctagcaaccagctcagagctggtcggcacaaagatccga
tcctgtaaagatgagtccttcctgcctactggcctgctgcaccgccgcatcctggacaca
gctaagaagctgggcgtgaccgaggtgccgctggaggtggtgaacttcatctcccacgcc
acccagtccagactgcgctcgctgctggagaaggtttcagccgtcgctcagcaccgcaca
gacgggggaaaggatgaagatctccacgaacagtcctcagacgttcgctcccagcttcgt
ttcttcgagcagctggagcgaatggagaaacagaggaaagacgaacaagagagagagatt
ctgctgaaggctgcaaagagtcgcgccagacaagaagatccagaacaggctcgcctgaag
cagaaggctaaagagatgcagcagcaggagttggctcagatgcgacaacgagacgccaac
ctcacggccctcgccgccatcgggccacgcaagaaacgcaagctggactcccctggaagc
gcggcggccagcgcagaggtggcttcaggctcgggcgccggctcctccccggccgcctcc
tcctcccgccagcagctccgtcagcggatcacacgagttaacctcagggacttcatcttc
tgcctggagcaggagcgctccacggctcgctcgctcatgctctacaaggcgctactgaag
taa
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