Micropterus salmoides (largemouth bass): 119893180
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Entry
119893180 CDS
T07309
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119893180 (dennd4a)
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119893180 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
119893180
NCBI-ProteinID:
XP_038561084
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MMDDKGPRVADYFVVAGLTDSSKPLEEELHFDDAGPKSVKPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGTSLRGPQIFLCFKRGRDKPPLTDLGILYEWKEKLKPGCHIV
QTTPSGRPANISNSSSQRIYITYRRAPKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPKEDYESFPLPESVPMFCLPMGATI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPFSEEGLSERQRSQLGLPSSDLGP
DGTRGVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQTVPFPSI
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYIPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNTLNKLYQQLTEGGQLNREDVQME
HTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDASSLFDL
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGGKIDS
ERPEETRMIELDESHCSEHTVYVNPPELPPLPQGEEYPLCYSYTGFPVLNAELLEPLEGP
SPPSAGMASRHSSPASPTAIFRRSKQEIKSAQRMAKTYSSMPQMWSKCLLRHCYGLWFIC
LPGFVGTCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKQAGRKQQTPH
RDPQMSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERMCGRESDNTPLVEDKGPRQSTPDIEDSMSSISPSTRSCKSTDVSAVTGNGNKLVSS
PSSDTTLCAVLPKTERPKSLDLSGGQGSLRLTVPHLGSTKQHHLAADRLHGVEEEETETD
KQKPLVERSVSCSGVVERPGVSIERSVSCSAGTVRRTGIEMGFDPLSLIATDTVQESDQE
NGSAPTARRDLAEEIETYMNNANSPLSSRAPSMDLQNPSSPLFRSASSPHTSPHPSTLLH
SNTHLPLPVKPKEKLRPSPSLPLGVCNKDRERPSSLVSPSSPTPSTSSFSMDSLFTPTLD
IFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDANCDRISVSSLTSGEADCSSLLDSDAC
LDPDGFTSPQHSSVSRLRRSPIVGHTNLGSPSTPNRVFRHNSFSGGLALPSKTPHTPDSS
PDTSRFQPTPNYTIEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLP
FLNVEIKDLRPQTRSSKDSNPVTEEDTSALLNLEAKMSAADSAGQSPAEQRQESSGSADP
PVSPLSSAPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVWYFRRLE
LPSNLPALILASQRCSHGDQTHQSVPSEDSKQVLVRIMWDNLKLHKDKVQPSYVLWNTHC
ANSLVRSGLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQIIQVLGPELGFKRQRSLYRDL
LFLALVALGKNNININAFDREYKLAYDRLNPNQVKLTHNCDRPPGAGVMECRRTFGEPSL
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgataaagggccccgtgttgctgactactttgttgttgccggcctcaccgac
tcctccaagcctctggaggaggagctccactttgatgatgccggtcccaaatctgtaaaa
cccaaagcccccatcactgacgtcgctgtggtgatccgctccctgggtgaagaagtaccc
ccaggtttcacctgtgtggaaagcaccccctcgggcctctctgcagagctcaatggaacc
agcctcaggggcccgcagatcttcttatgctttaagcgaggcagagataagcctccactg
acagatcttgggattctgtatgagtggaaagagaagctgaagcctggatgtcacatcgtc
cagaccacaccctcaggtcgacctgccaacatcagcaactcatcatcacaacgcatttac
attacctatcgccgcgccccgaagagccagccccacacttcactggctgtcactgatgtt
tgcatcatcatccctggcaagggggagactccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcctcagtctacctttgttataagaagtctctggct
aaagcaaacacaatcgcatacaaagcaggtctgctgtgtaggtatcccaaagaagactac
gagtccttcccactgcctgagtcagtgcctatgttttgcctgcccatgggggctacgatc
gagtgctggccagcacacaccaaacactccctgcctgttttttccacatttgtactgacg
ggggcctctggagaaaaggtgtatggagcagccatccagttctatgagcctttctcagag
gaaggcctgtctgagcgtcagcgctcacagctcggcctgccaagctctgatcttggacct
gatgggaccaggggtgtttacagcaacaagagcatctgtctgctctcccactggccattt
ttccagtccttcaggagctttctgactttcctctacagatactctatctctggaccacat
gccctgcctattgaaaagcacatctctcacttcatgcaaacagtgccattcccctccatt
cagagaccacgcatcctagtgcagctgtctccacatgacagcctgatactgagtcaacct
gtgtcctctccactgcctctcagtggtggaagcctctctacattactactaaatctgggc
ccaaagaatgcggccactctgctggtgctggctgtcacagagcataagatcctggttcat
tccctgcgtccagctgtactcaccagtgttacagaggctcttgtgtctatgatcttccct
ttccactggccgtgcccttacatccctctgtgcccgctggcgctggccggtgtgctcagc
gcgccatgccctttcattgtaggtgtggactcccgatactttgacctttacataccccca
gctgacatcagctgtgtggatctggacaccaacactatctcccaaaaagacgacaagaag
gctttaacatggaaaatcttgcccaggagagcctgcaaacatcttcttaataccctgaat
aaactctatcagcagctcactgagggaggtcagctgaaccgtgaagatgtgcagatggag
cacacagtaactgacagtgagctcaatggcgggaagagcctccacactctggagctggag
atccaggaggccttcctgcgcttcatggcggccatcctacgaggctaccgctcctacctg
ctgcctatcacgcaagccccctctgagaagaccaccgatgccagctccctctttgatctc
caaggcttcctgaagagcagagaccgctcccatcagaggttttactctctcatgaccaag
acgcaaatgttcagccgtttcatagaggagtgctcctttgtcagcgataaagacgccagc
ctggctttctttgatgagtgtgttgataagctattcaccactggaggcaagatcgacagt
gaacggccagaggaaaccagaatgattgaacttgatgaatcccactgcagtgagcacacg
gtctatgtcaaccctccagagctgcctccactgccacagggagaagagtatcctctgtgc
tatagctacactgggttcccagtgctgaatgctgagcttctggagccactggaaggacca
agtcctccatcagcaggcatggcctcacgccacagcagcccagccagccctacggccatc
tttagacgctctaaacaggagatcaaatcagctcaaaggatggccaaaacctattcatct
atgcctcagatgtggtccaagtgtctgctacgccactgctatggcctgtggttcatctgc
ctgccagggtttgttggcacctgccactctaaagtccgggctctgcgtacagcttacgat
gtgctgaggaagatgcaggataagaaattgcaggctccagatgaggtgtgttaccgtgtg
ttgctgcagctgtgtggacagtacagccagccagttctggctgtcagggtgctgtttgag
atgaagaaagctggagttcaacccaatgccatcacctatgggtactataacaaggcggtg
ttagagagcacctggccctccaccaccagaggaggctactttttgtggggaaagctgagg
aatgtggtcctcggcgtactccagttcaaacaagcagggagaaaacaacagacccctcac
agagatcctcagatgtcagatggcagtgatcttgacacagtcagccatggcagtttggat
agtgctaatgactctgctgagcgcacctccatcgacactgacttcactaaaatggactcc
agtgacgatggatttagtacaggtggacagtcagaccaaggctacgattcattatccaaa
gaggaggagaggatgtgtggcagagagagtgacaacacaccactggtggaagacaagggg
ccaaggcagtccacacctgacatcgaggattcaatgagcagcatctctccttctactaga
agctgcaaatcaacagatgtcagcgcagtcacaggcaatggtaacaagctggtttccagt
ccatctagtgacaccactctgtgtgcagttctaccaaagacagaaaggccaaaatctctg
gacttgtctggtggacaaggaagtctcaggctcaccgtccctcaccttggttcaacaaag
cagcaccacctagctgctgacagactgcatggggtggaagaagaggagacagagactgat
aaacagaaacctctggtggagagaagtgtcagctgcagcggtgtggtggagaggccaggt
gtgtctatagagagaagtgtcagctgcagtgctgggactgtgaggagaacaggcattgag
atggggtttgatcccttgtcactgattgcgacagacacggtacaagagagtgatcaggaa
aacggcagcgcgcccacggcccgccgcgaccttgctgaagagattgagacgtacatgaat
aatgccaacagcccccttagcagccgcgcacccagcatggacctgcagaacccctcaagc
cctttgtttcgctccgcctcgtctcctcacacctccccacatccctccaccctgctccac
tccaacacacacctcccacttcctgtcaaacccaaggagaagctgaggccgtcaccgtct
cttcctctgggtgtctgtaacaaagacagggagaggccttcctccttggtgtcaccctcg
tcacctactccctccacctcatcattctccatggactcattgttcactccaaccctggac
atcttcaagagcagcgtcatatcagcagggaagggcgtggcggagaaggccagtcgcctc
tactctcgtctgtcctcacagacttcattaacacaggatgcaaactgtgaccggattagc
gtttcctcactcacctcaggagaggcagactgctcctcactgcttgatagtgatgcctgt
cttgacccagatggctttacctccccccagcacagcagcgtgtcccgactcaggaggagc
ccaattgtgggtcataccaacctgggcagcccaagcaccccgaacagagtgttcagacac
aactccttctctggtggtttggcacttccctctaaaactcctcacactccagattcctcc
cccgacaccagccgcttccaacccactcccaattacactatagaggtgctgatgtccagc
tgttcactttgtaagacgtgtgactgtctggtatatgatgaggagatcatggctggctgg
acagcaaacgactcaaacctcaacagcacttgtcccttctgcggcacagcctttctgccc
ttcctcaatgtggaaatcaaagacctgagaccacagaccaggtcttctaaggatagtaat
cctgttacagaggaggacacatcggcgttactcaatctcgaggccaaaatgtctgctgca
gacagtgctggtcagtcacctgcagagcagaggcaggagagtagtgggagtgctgacccg
ccagtctcacccctctcctctgctccggtgacggtgccctacctgagccctctggttctg
tggaaggagctggagagcctgctggtgaatgagggtgaccaggccatctcctctccgagt
gttgtcgatcaacaccccatcgtcttctggaaccttgtgtggtacttcagaaggctggag
ctgccgagcaacctgccagctcttatcctggcctcccagcgctgtagccatggagaccag
acccatcagagtgttccatccgaggacagcaaacaggtgcttgtgaggattatgtgggac
aacctgaagttgcacaaagacaaagttcaaccctcctatgtcctgtggaacacacattgt
gcaaactccctggttcgctctgggctgtgtgaagaagggcagctctttactgtggagcta
ctgcagggttttgtgaggagcattaagaagagtgatgtttatcagcccatgagccagatc
atccaggtgctggggccagagctgggttttaaaagacagaggagcctgtaccgagattta
ttgttcctcgctctggtggcattgggcaagaacaacattaatatcaatgcttttgatcgg
gagtacaagttggcatatgatcgcctcaaccccaaccaggttaaactgacacacaactgt
gaccggccccctggagcaggggtcatggagtgcaggaggacatttggggagcccagcctg
tga
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integrated database retrieval system
