Micropterus salmoides (largemouth bass): 119893203
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Entry
119893203 CDS
T07309
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1b isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119893203 (ambra1b)
04137 Mitophagy - animal
119893203 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119893203 (ambra1b)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119893203 (ambra1b)
Membrane trafficking [BR:
msam04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119893203 (ambra1b)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119893203 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
119893203
NCBI-ProteinID:
XP_038561120
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MASRQRNSVRILSSRERGSQTFGSQRLLQLLVEEKVRWMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSDTE
RVRLVRFDPLGHNLLTAIVNPSNQQSEEDSEVPMDSVEMPHFRQRSFLPSQPVRRTPILH
NFLHILSSRSPGAQAAGEQPRPLGENGSNVGESPSMPLAQYPTSERGPPFPGCTQHLGMV
CLCSRCSVNRNSSLAANATPSDPRVSSETPQPTPASTFSSARTEPRQPSERPSAFTSVYY
SAGTSLNPTAPSGVEPHSTSRPGPDWTRNLLSMREGGVGLGMLPPRTSSSSISLLSVLRQ
QDGSSQSPVYTSASEGRGFPQQGEPGARDGSGTSSGHHPFWDGSRSNTASFRNVLQCNLS
RYFMEFDRMQDLEPPLGGSMADGSQEQSQELLNNNMDPERPGPSSTSSTSSPTIIHYQPP
LPPPPTSNSLENNIPPPASRGHLNRCRACHNLLTFNHDSQRWERTNQASSTSASTLEPSS
SSPSFPPSSPWQPEDGRRTVEAQPPERRAPPVPSEQPPPHGGGTVSFPIAPTPSQAGEQT
VGLVYNQDTAQWERVYRQAAVGRSAEPPEALSQEMPVDPPDEDSLRRRLLESSLLSLSRY
DMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRAMSTSSDSPA
SNPSNSMDNSDVDFEELDDNGDRARHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFH
ERGQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNV
LVPNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYTKRFGP
NAISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMA
PDQRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAESNSEPLFSVNNS
GTSRTRGSDRPGPNRSGWRLDRDMGLMNAIGLQPRHPTPSVTSQGTQTPIIQLQNAETQT
ERDLSEPSVSQPKPNVPSETPSTSGAAQLEASQASRAQDGSQAEASADANTSAASTGESP
EFGSGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTGMGAS
RPAADPTVTAPSTSSGPLLITQTQTYAPPQASDPSEQLAPMWGPQGLSGPQPSGLSLDMD
DVFVGGRTDDESLPGPSSSLLLSSSSSSSHSPLPSGGGGGGGPHSYPGDPYSR
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtcagaggaactcggtccggatcctgtccagccgggagcgaggctcccag
acctttggctcccagaggctcctgcagctgctggtggaggagaaagtccgctggatgaaa
tggcagagtcagaaagtggagctgccggacagccctcggtcaacgttcctgctggcgttc
agccccgacaggaccctcatggcttccacgcatgtcaaccacaacatttacataacggag
gtgaagactggaaagtgcctacattccttagtgggccaccgcagaaccccctggtgcgtg
acctttcaccccacaatccccggcctggtggcttccgggtgccttgacggcgaagtccgt
atctgggacctgcatggcggcagtgagagctggtttacagagagcaacgttgccattgcg
tccttggctttccacccgacggctcagctgctcctcatcgccaccaacaacgagctccac
ttctgggactggagccgaccggagcccttcgccgtggtcaagacgggcagtgacacggag
agagtccggttggtgaggtttgatcctcttggtcacaacctactgacggcgatagtgaat
ccgtccaaccagcagagcgaggaggactcggaggttcctatggacagtgttgagatgcct
cacttccgccagcgctctttcctgccttcccagccggttcgccgcacacccatcctccac
aatttcctccacatcttgtcgtcacgctctcctggggctcaggcggcgggggagcagcca
cgccctctgggtgaaaatggaagcaatgtcggagagtctcccagcatgcctctggcccag
taccccacctctgaacgcggacctcccttcccgggctgcacccagcacctcggcatggtt
tgtctatgtagtcgctgctccgtcaatcgcaacagttccctggctgctaatgcgacgccc
tctgatcccagggtgtcctctgaaactcctcagcctaccccggcttccactttctcttcg
gcccgtacggagcccagacagccctcagaacgaccctctgcctttacctcggtctactac
agcgctggcacttctcttaatcccaccgcaccgagcggcgtcgagccgcactccacctcc
agaccaggacccgactggacacgcaacctgctaagtatgagggagggtggagttggttta
ggtatgctccctcccagaacctcctcttcctcaatcagcctcctgtcagtgctccgtcag
caggacggctcctctcagtcccctgtctacacctctgcctccgaaggacggggtttcccc
cagcaaggagagcccggggcccgagatggttccggtacaagcagcgggcatcatccattc
tgggatggctctcgcagcaacacggcctccttccgcaacgtgctgcagtgcaacctgagc
cgctacttcatggagtttgaccgcatgcaggacctggagcccccgttagggggcagcatg
gcggatggaagtcaggagcagagccaggagttgctcaataataacatggacccagagaga
cctggaccttcctcaacttcctccacctcctcccctactataatccactaccagcctcct
ctccctcctcctcctacctccaacagcctggagaacaatatccctcccccggcctcccga
ggccatctgaaccgctgccgggcatgccacaacctgctgacctttaaccatgactctcag
cgctgggagcgcaccaaccaggcctcctccacctcggcctccactctggagccctcctcc
tcttccccctcctttcctccttcttccccttggcagcctgaggatggaaggaggacagta
gaagcccaacccccagagaggagggcgccaccagtgcccagcgagcagccgcctccccac
ggtggaggaacggtgtccttcccgatagccccgacccccagccaggctggagagcagaca
gtggggctggtgtacaaccaggacacagcgcagtgggagagagtgtaccggcaggctgct
gtcggcaggtcggcagagccaccggaggccttaagccaagaaatgcctgtagacccccca
gatgaggactcgctgaggagacgactgttggaatcatctctgttatcgttgtctcgctat
gacatgtcaggatcgagagaccaccccatttaccccgatccagccaggctttctccagct
gcttactacgcccagagaatgatccagtatctgtcgaggcgagacagcattcgtcagcgt
tcacttcgctatcagcagaaccgcctacgggccatgtcgacttcatccgacagccctgcc
agcaacccgtccaactccatggataatagcgatgtggactttgaggagctggatgataat
ggagaccgagcgaggcacaggacgccacgtaacgccaggatgtctgcgccctcgctgggt
cgctttgtcccgcggcgtttcctcctgccggagtacctgccctacgctgggatcttccat
gaaagaggtcagcctggcctggccacacactcctctgtcaacagagtactcgccggtgca
tcgatcggagatggtcagtctgcggtcgccagcaacatcgctaacactacctaccgtctg
cagtggtgggacttcaccaaatttgatctgcctgagatcagcaatgcctcagtcaacgtt
ctggtgccaaactgtaagatctacaacgacgcgagttgcgacatttctgcagacggtcag
ctgctggctgtcttcatccccagcagtcagcggggtttcccagacgagggcatcctggcc
atctactctctggctccccacaacctgggagagatgctctacaccaagagattcggtcca
aatgccatctctgttagcttgtctccgatgggctgctatgtgatggttggcctggcctct
cgcaggatcctgctgcatcccaccaccgaccacatggtggcgcaagtcttccgcctgcag
cagcctcacggtggagagacttccatcaggatggtgttcaacgtggtttacccgatggct
ccagaccagaggcgccacgtcagtatcaactctgctcgctggctgccggatccaggaatg
ggtctggcttatggaaccaacaagggagacctggtcatctgccggcctgtgttctatcga
agcgacggcgagagccccgcagagtcgaacagcgagcctttattctctgtcaacaacagt
ggaaccagccggacccgaggatctgacagaccagggccaaaccgctctggctggaggctg
gacagagacatgggtttgatgaacgcgattggtcttcagccccgacaccccaccccttca
gtgacatcacaaggaacccagacgccaatcatccagctgcagaacgctgagacacaaaca
gagagggacctatcagagcccagcgtctcccagccaaaacccaatgtcccttctgagact
ccgtccacgagcggagctgcacagctggaggcgtctcaggccagcagggctcaggacggc
agccaggctgaagcttcagcagatgctaacacgtccgccgctagcaccggagagtctccc
gagttcggttcgggtgaagacgccctggcgcgaatccgcaggctgatcgctgagggcggg
atgaccgccgtggtccagcgggagcagagcaccaccatggcctccatgggcgggttcgga
aacaacatcatcgtcagtcaccgaatccaccgcggctcccagacgggcatgggggcctcc
aggcctgcggctgaccccaccgtgacggccccctccacctcctcgggtcctctcctcatc
acccagacccaaacctacgcccctccccaggcttccgacccgtctgaacagctggccccc
atgtggggtccccaggggctgtcgggcccccagccctccggcctctctctggacatggac
gacgtgtttgttgggggtcgaacagacgacgaatctctgccgggtccctcctcctccctg
ctgttgtcttcctcctcctcctcctctcacagtcccctccccagcgggggcggagggggc
ggcggcccccacagttaccccggtgacccgtacagcaggtag
DBGET
integrated database retrieval system
