Micropterus salmoides (largemouth bass): 119893383
Help
Entry
119893383 CDS
T07309
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119893383 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119893383 (lsp1a)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119893383 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
119893383
NCBI-ProteinID:
XP_038561431
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSNALLRRNSSKEGLRNLMRLTAQRSIEDAEEVERERRRRARESLRWSNGGSLPRESSLE
NETPAEESMYDGSLKPNSCPSLEEDEGFSDWTQRRERRRQQRLQELNQGGEEDEEEEVVT
INKAVPEKTIQALVTSSSRLQIQEQEEVENTKVEMERRKAFDKEGIRAERVRREKEMEEK
DKRKREEVMTRRKEEIQRPNAEVEKRKEVKISYTSKVFLHQEPKHSNGDATNEEVTSYVI
NKTKRSTSRAMEPEEAEAILETEQRLEKIRLSLQQKESQGLEQLRLRQAEAEQELEELKR
RREERRRVREEEERRREEEEQQRLAKEEEERRRMKEDIERRRMEAAERMKSLSTSNVDGD
EMFSPVNPKAPTHKITERTESLNRSLKKSNSFKKTQPLVLLPKIDDKLEQYAHAVENSQE
ARAVKASLNDLPSSPEVVASKKNLFEAGEAWSQSPTKGATCKDTEGLKVGVASLITQWVK
GPSDGSRQSLCKPADVKPGDVMQKKNMWEVIGDSSGQPGQRAKVSAAGKKYKFIVTGHGK
YEKIPVDDETGGEYTNGKSDLYHGDY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctctgctgaggagaaactctagtaaagagggtttacgaaacctcatgagg
ctgacggctcagaggagcatcgaggatgctgaggaggtggagagggagcgccgtcgaaga
gctcgtgagtctttgcgctggtcaaacggcggctcgcttcccagagagtcttcactggaa
aatgagacgccggcagaggagagcatgtacgacggcagtctgaagccaaacagctgtccg
tctctggaagaggatgaaggcttcagcgactggactcagcgcagagagagaaggaggcag
cagcgcctgcaggagctcaaccagggaggcgaggaggatgaggaagaagaggttgtcacg
ataaacaaagctgtacccgaaaagaccatccaggccttggtcacatcctccagccgactc
cagatacaggagcaggaagaggtagaaaacaccaaggtggagatggagaggaggaaggca
tttgataaggagggaattcgagctgagagggtgaggagggagaaagagatggaggagaag
gacaagaggaagagagaggaggtgatgaccaggagaaaggaggagattcaaaggccgaat
gcagaggtggagaaaagaaaagaagttaaaatctcctacacatcaaaggttttccttcac
caagagccgaaacacagcaatggagacgcaaccaatgaggaagtgacgtcatacgtgatc
aacaagacaaaaaggtccaccagcagagccatggagccggaggaggcggaggccatcctg
gagacggagcagcgtctggagaaaatccggctgagcctccagcagaaggaaagccagggg
ctggagcagctgagactccgacaggccgaggccgagcaggagctggaggagctgaagagg
aggagggaggagagacgtcgagtccgggaggaagaggagcgtcggagggaggaggaggag
cagcaacggctggccaaagaggaggaggagaggaggcggatgaaggaggacatcgagagg
aggaggatggaggcagcagagaggatgaagagcctgagtacgtccaacgtggacggagac
gagatgttcagtcccgtcaatcccaaagctcccacacacaagatcacagagagaacggag
tcgctgaaccgctcgctaaagaaaagtaacagcttcaagaagacgcaacctctcgtactg
ctgcccaagatcgacgacaagctggagcagtacgcccacgctgtggagaactcccaggag
gcacgggcagtgaaggcatcactgaacgacctgcctagctcacctgaggtcgtcgcctcc
aagaaaaacctatttgaggccggagaagcctggagccaaagtcccaccaaaggagcgacc
tgcaaggacactgaggggttgaaggtaggcgtggccagcctgatcactcagtgggtgaag
ggtccgtctgacggcagcagacagtcgctctgcaaaccggcagatgtgaagcctggagat
gtgatgcagaaaaagaacatgtgggaggtgattggagactcatcagggcagccggggcaa
agggccaaggtctcagcagctggtaaaaagtacaaatttatcgtcactggtcacggcaaa
tatgagaagatccctgtggacgacgagaccggaggagagtacactaacggaaagtctgat
ttatatcatggtgattactga
DBGET
integrated database retrieval system