KEGG   Micropterus salmoides (largemouth bass): 119893524
Entry
119893524         CDS       T07309                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119893524 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119893524 (exosc6)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     119893524 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 119893524
NCBI-ProteinID: XP_038561671
LinkDB
Position
Unknown
AA seq 274 aa
MPTDTKRVRGPEVSQSPSLFLCKPAAVLPSHGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLMCCVYGPRETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKDL
SLMLHESLQPAVCLHKYPRSQVEVNVMVLENGGSVLAHAVTCASLALADAGIEMYDLVLG
CSIRQDGASYVVDPSYTEENGCSSVSSENQGGLTVAFLPSLNQISGLQSDGEMTEETLTA
GVRTCIEGCYKLYPVIQQALAKAVRRVAPPPSES
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccgacggataccaaacgtgtgcgcggcccagaagtctcccaaagtccgtctctgttt
ttgtgtaaaccggcggcagtcctcccgtcgcacggccccagagcggacggccgacagcgg
gaccaggtggacgtccggcctgtgtttgtccggtgcgggctggtgagccaggccaagggg
tccgcgtacatcgaggctggaaacaccaagttgatgtgctgcgtttatggccccagagaa
acagagcgaaaagatgagaccgatatgaaatgtggaaggttgactactgacatgcgattt
gctccattttcctgcccggagaggggctcctggattcaggggagtcaggacaaggacctc
tccctgatgctgcatgaaagtctgcagccagccgtgtgcctccacaaatatccccgctct
caggtcgaggtcaacgtgatggttcttgagaacggcggttcggttctggcccatgcagtc
acatgcgcttctctcgctctcgcagatgcagggattgaaatgtacgatctggtgcttggt
tgttcgatccgccaggatggcgcctcttatgtggttgacccctcttacacggaggaaaac
ggctgcagctcagtcagcagcgagaaccagggcggtttgactgttgcgttcctccccagc
ctgaaccagatttcggggctgcagtcagatggagaaatgactgaagagactctgaccgcc
ggagttcggacctgcattgagggatgctataaactgtacccggtcatccagcaagccctg
gccaaggctgtgcgcagggttgctcccccgccatcagagagctga

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