Micropterus salmoides (largemouth bass): 119893563
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Entry
119893563 CDS
T07309
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119893563 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119893563 (nup160)
03036 Chromosome and associated proteins [BR:
msam03036
]
119893563 (nup160)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119893563 (nup160)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119893563 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
TMEM183_C
RMD1-3
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
119893563
NCBI-ProteinID:
XP_038561724
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MAAVLERSFIEICGFERETPHRFREVTVNLGLTALPGGVKFPDGAGAFHYEESGKLLSVT
SNRFVHWSTSGDTLQLVEQSLDTNLLNNAIRLKFSHCSVLPGGVSIQETLNNVIILVCTN
QSVHRLVLPHPTRMYRSELVTELHMQSIFTDVGKLSLQDPSHSAVIPGPVGQTGSPSSAT
AWLSQSGEAHYALASPAGGITVVTLPPHDTQGSVSVLELKRSSMMQRLSGWMPTAIRGEQ
SPADLVLSLAVRELEEDSFIFALCQDHKLRMWSFKEQACLLEADMLEYMPACKGVKHLAG
QGHRLRLAFSPATGLCLSVYLAVPQRGQFTVLQLVATDNNRYSLDHISSLFTTQETLVDF
ALTSSDIWGVWVDDSNTTVVKYINFEHNTAGQWNQVFVQPPPEEEVHLGVDQDPRETYLE
VLFSPLRFTASAIVKALQIYRRGSERIADWSWESLKKEVTVAVESELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEALSLPLGLTVSQHTNMACLLKKGFVSFLLPCFAVDHLYL
SYDEYLFSEEETPIAEDLDLGRDVLQMVQCLRLISDAVSGEMAYEMEKALEHLQSPERAA
DLVLENMLSNDNDSVIEDIQNKLQDVRNPMAAMMVLLREMDLETDSEVGGEGPITPGQSL
NTRISLSQLYGSSSAVSVVCQAVCHMTMTRALFCRDLLILQKLYLRFGDNVFLGGGAQLL
QLQQDLIPRSSHLLSSYYLLKHISQSLASAVPVDIIDANLQHLTVLELSDTPTLSSGRSA
LSPQTVVELFYQTAARKIIISQLYSQQQQQQSNSLLNWSHMISNVVQLLAQLLWPSNPGF
QFPECLMANCQYTQLQEYVRLIGPWCQVNIGSCRFMLGQCYLANGEGQKALQCFQEAATE
VEKEEFLMKLTGTEEDEAASTSRLQYYNKVLRLLEDVGLPELVIQLASLAITEAASDVNS
QAALWTRIFKHHLDLGHNSEAYEALIQNPDSSMQLDCLRQLVVVLCERSQLQDLVQFSYV
NLHDEVVSIIESRARGLDLLAHNYYELLYAFHINRHNYRKAGTVMFEFGMRLGREVRTRL
GLQKQVNCYLAALNCLRLIRPEYAWIVQPASGAVYERPGASPKRNSDGEFASEPVKRQVD
ILELKDLEKEYILSRSRLTLAQHHPPSAAIAGSASAEEMVALLVQAGLFDSALSVCQTFS
LSLTSVFDSLTFKCIKLQFGGEETQNEAWTWLAANQLSSVVNTKESSATDEAWRLLASYL
DRYPSANGHHHRCVINKLMSHGVPLPDWLVRAYKAVDAASLLRLYLNFDLLDAAAELVME
YVDALLGRGHQYFGIERPLSATSASVWLPYTAIDQLLQTLNETQTNSNIYNKVRDKLEDY
HKLVEQTTKRRLIAR
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttggagcgcagcttcattgagatctgcgggttcgagagagaaactccg
caccggttccgagaagtgaccgtgaacctcggtctgactgctcttcctggtggcgtgaag
tttcccgacggcgccggagcatttcattatgaggagagcgggaagctgctgtccgtcacc
agcaacagatttgttcactggtccacgtcaggagacacgctgcagctggtggagcagtct
ctggacaccaacctgctcaacaacgccatcagactcaagttcagccactgcagcgtgctg
cctggaggcgtcagcatccaggagaccctcaacaatgtcatcatcctggtctgcaccaat
cagagcgtccacaggctggtgctgcctcaccccacgcgcatgtaccgcagcgagctggtg
acggagctccacatgcagtccatcttcaccgatgtggggaagctgagtctgcaggacccc
tcgcacagcgccgtcatcccgggcccggtgggtcagacggggagtcccagcagcgctacg
gcctggctcagtcagtccggagaggctcactacgctctggcttcacccgccggaggcatc
acggtggtcactctgccgccccacgacacacagggcagtgtgtctgtgctggagctgaag
aggagctccatgatgcagaggctgtccggctggatgcccacagcgatccgtggggagcag
agtccagcagacctggtcctcagtctggctgtcagagagctggaggaagactcattcatc
ttcgcgctgtgtcaggaccacaagctgcgcatgtggtccttcaaggagcaggcgtgtctg
ctggaggcggacatgttggagtacatgccggcctgtaagggagtgaagcacctggccggg
cagggtcaccgcctgaggctggccttctcccccgccaccggcctctgtctgagcgtctac
ctggccgtccctcagaggggacagttcaccgtcctgcagctggtcgccaccgacaacaac
cgctacagcctcgaccacatctcctctctcttcaccacacaggagacgctggtggacttt
gctctgacctcctcagacatctggggcgtctgggtggacgactccaacacaactgttgta
aaatacatcaactttgaacataacaccgcaggccagtggaaccaggtgtttgttcagcct
ccaccagaggaagaagtccatctaggagtggaccaggaccccagagagacgtatctggag
gttctcttctcacctctccgcttcacagcctcagccatagttaaagctctgcagatctac
cgcagaggttcagagaggattgctgattggtcctgggagtctctgaagaaggaggtgaca
gtggcggtggagagcgagctgcagagcagtgtgacggagtttgagttttctcaggaggag
tatcggcagctgcaggtggagttctggtccaagttctatgcctgctgtcttcagtaccag
gaagctctgtctctgcctctgggtttgactgtgagccagcacaccaacatggcctgtctg
ctgaagaagggcttcgtgtcgttcctcctaccgtgtttcgctgtggatcatctgtacctg
tcctacgacgagtacctgttctcagaagaggagacgcccatcgctgaagacctggatctg
ggccgcgacgtgctgcagatggttcagtgtctgcggctcatcagtgacgccgtttctgga
gagatggcgtacgagatggagaaagctctggaacacctgcagtcaccggagagggcggcc
gacctcgtcctggaaaacatgctgtccaatgacaatgacagcgtgatcgaggacatccag
aacaaactgcaggacgttcggaacccgatggcggccatgatggtcctgctgcgggagatg
gacctggagacggactcggaggtcggaggagaaggacccatcacgcctggtcagagtctg
aacaccaggatcagcctgtctcagctgtacggcagcagctcggccgtgtctgtggtctgt
caggccgtctgtcacatgaccatgacccgtgccctgttctgcagagacctgctcatcctg
caaaaactctacctgcgcttcggagacaacgtgtttctgggtgggggggctcagctgctg
cagctccagcaggacctgatccctcgcagctcccacctcctgtcctcctattacctcctt
aaacacatcagtcagagtctggcctccgctgtgcccgtggatatcatagacgctaacctg
cagcacctcacggtgttggagctgtccgacacgccgacgctctccagcggcagatcagcc
ttgagtcctcagacggtggtggagctcttctatcagactgcagccaggaagatcatcatc
tctcagctttactctcagcagcagcagcagcagagtaactccctgctgaactggagtcac
atgatctctaacgtggtccagctgctggctcagctgctttggcccagtaaccctggtttc
cagttccctgagtgtctgatggccaactgtcagtacacgcagctgcaggagtacgtgagg
ctgattggtccctggtgtcaggtgaacatcggctcctgccgcttcatgctgggtcagtgt
tacctggccaacggggagggccagaaggctctgcagtgcttccaggaggcagcgacggag
gtggagaaggaggagttcctgatgaaactaacgggcaccgaggaggacgaggcagcctcc
acctccaggttacagtactacaacaaggtgctgcggctgttggaggacgtgggtctacct
gagctggtcatccagctggcctccctggccataacagaggccgccagcgacgtcaacagc
caggccgctctgtggacccggatcttcaaacaccatctggatctgggacacaacagtgaa
gcgtacgaagccctgattcagaaccccgacagcagcatgcagctggactgtctccgtcag
ctggtggtggttctgtgtgaacgctctcagctccaggatctggtccagttctcctacgtc
aacctgcacgatgaggtcgtcagcatcatcgagtccagagccagaggactggacctgctg
gcccacaactactacgagctgctgtacgccttccacatcaacaggcacaactacaggaaa
gcggggacggtgatgttcgagttcgggatgcgtctgggtcgtgaggttcggacccgtctc
ggccttcagaagcaggtgaactgttacctggctgctctcaactgtctccggctcatcaga
ccagagtacgcctggatcgtccagccggcctccggagctgtgtatgagcgtccgggagcg
tctccgaagagaaactccgacggagagtttgcctctgaaccagtcaaacgtcaggtcgac
atcctggaactcaaggacctggagaaggaatacatcctgtcccgcagccgcctcaccctc
gcccagcaccatccgccatcggctgccatcgctggcagcgcctcagcagaggagatggtg
gccctgttggttcaagccggactctttgactcggctctgtccgtctgccagaccttcagt
ctgagtctgacttcggtctttgacagtttgaccttcaagtgcatcaagctacagttcggg
ggggaggagactcagaacgaagcctggacctggttggctgccaatcagctgtcatctgtc
gtcaacaccaaagagtccagcgccacagatgaggcgtggcgcctgctggcctcgtacctg
gacaggtatccctctgctaacgggcaccaccaccgctgtgtcatcaacaagctgatgtca
cacggcgtccctctgccggattggctggtcagggcctacaaggccgtggacgccgcgtct
ctgctgcgtctctacctgaactttgacctgctggacgctgcagctgagctggtgatggag
tacgtggacgctctgctggggagaggacaccagtactttggaatagaaaggcctctttca
gcgacctccgcttcagtctggctgccgtacacagccatcgaccagctgctgcagacgctc
aacgagacgcaaaccaacagcaacatttataataaagttcgagacaaactggaggattat
cacaaactggtggagcagacgaccaaacgaagactcattgctcgatga
DBGET
integrated database retrieval system
