Micropterus salmoides (largemouth bass): 119893704
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Entry
119893704 CDS
T07309
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119893704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119893704
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119893704
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
HECT type E3
119893704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119893704
NCBI-ProteinID:
XP_038561956
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MFSWGEDGLWGFRLKDGSVVDSRAAGAGVQYSNLGYHITDLSAGHRALAFLKSNGNSFII
RMNVSEDGRRVRGKQKFVNFKEKIQAVSCGDDTVTLLSERGSVLCVDAAHTYIPRPLEAL
SNIPVSQVACGGQHAVALTKDGHVYTWGQDSRGQLGLRERNLGPNSPQHLRSLSAIPLVQ
IAAGGEQSFALSVSGGVFGWGRNDCGQLGLGDTADRHTPTPVHCLNMKKTVQISCGKDHT
AALTKDGAVFTFGSGTYGQLGHNSFSNELRPRLVAELWGAKVTKIACGRHHTLVLTNSKR
VYSFGCGEQGQLGHGQESHPSVPLPVQLQEDAADDPKITNIFAGGNCSFATCTTNEEVHE
GSNIASVSNVPQPCLDDMIDSWNSEGDSKAWKKIKQEIHRMFSSASCVNKSFLEQRKDQH
FQTSPKNSGLNLSLARRAFKKLVKKDNVLAEVEAAVLHLLPSLDKKPVGVEGLRIFLLLN
ELLHVIRRHKRRHTSTKLSEAVAAAVLSLSAESLQVIGNWWSSLSYSTMVKHVKVWKHAL
SVILSFEPVPRHSGVKNLLLVLQYMYNANSKIPEPKRMPESDFYLLTDTNFLCEDLLLWR
LRSQHKNGNAEPLILCNFPFVMDLQSKKMVFDKNAEYTKLETMRHVFFWGSLLEFVWPPP
GALVFILDLRRASVLEDTFDQLAAAHHNDYKKPLVVFFDENRTFDEVSIKDFFYEVFHEM
VSTEFGMFMFNNSTKDSKTLAWFPSTATQEDQRYFLFGVLCGMALYHRCIIYLPFPLALF
KKLLSVKPSLEDMIEFSPCVGKSLQDILEDCNDDDDLYMDFSVNWDGTEVDLDPQVPGKP
VTSRNKKEFVDAYVNHAFNTSVEGVFHEFKRGFYLVCDRDLVKLFRPEELQEVLVGKDFR
DWAKLKQSTSYEGEYHVGHPTIQMFWEVFDELTEDQKKAFLWFVTGFEREPILGLEKIKM
TVRVGQVQDLSYDQHYPETHTCFSILELPLYSTKEIMQTKLTEALRKNRRICK
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggacggtctgtggggctttaggttaaaagacggctcagttgtc
gacagtagggcagcaggggccggggttcagtattcaaacctcggctatcacatcacggat
ctgtccgcaggtcacagggcgctcgctttcctcaaaagtaatgggaactcgttcatcatt
cgcatgaatgtgagcgaagatgggagaagagtgagagggaaacagaagtttgtcaacttc
aaagagaagatccaggctgtgagttgtggcgatgacacggtcacactgctgtctgagcgg
ggcagcgtcctctgtgtggacgcagctcacacttacattcctaggcccctggaagctttg
agtaacataccagtttctcaggttgcttgtgggggccagcatgcggttgccctgaccaaa
gatggtcatgtatacacatggggccaggactccaggggccagctgggtctgagggagagg
aatttaggccccaattcaccccaacacctccgatctctgtcagcgatccccctggttcag
atcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggctgg
ggcagaaacgactgtggacagctcgggctgggagacacagcagacagacatacaccaact
cctgttcattgcctgaacatgaagaaaactgttcaaatttcctgtggaaaggaccacact
gccgccctgacaaaggacggtgcagtgtttacatttggctctggtacatatggacagctt
gggcacaactctttcagcaatgaactacgacctcggcttgttgcagagctctggggggca
aaggtcaccaagattgcatgtggacgacatcacaccttagtgttgacaaactctaaaagg
gtctactccttcgggtgtggagagcaagggcagctgggacacggacaggagagccatccg
tctgtgccgctacctgttcaactacaagaagacgctgctgatgatcctaaaattacaaac
atcttcgcaggaggaaactgttcgtttgcaacatgcacgacgaatgaggaggttcatgag
ggctcaaacattgccagtgtcagcaatgtcccacagccttgtcttgatgatatgattgac
agttggaactctgaaggtgattcaaaggcatggaaaaagataaaacaggaaatccacagg
atgttttcctctgcatcttgtgtgaataaaagcttccttgagcaacgcaaagatcaacat
ttccagacttcaccaaagaactccggcctgaacttgtcacttgcacgacgtgctttcaag
aaactggtaaagaaggacaatgttttggcagaggtagaggctgcggtcctgcacttgctt
ccctcccttgataagaagccagtgggagtggaggggttgaggatctttctgcttctcaat
gagcttctgcatgtgatccggagacacaaacggcgccacacgagcacgaagctctctgag
gcggtcgctgctgccgtactaagcttgtctgctgaaagtctccaggtcatagggaactgg
tggtcctcactgtcgtactccaccatggttaaacatgttaaagtgtggaagcatgccctc
tccgtgatcctgtcctttgagcctgttcctcgccactctggagtcaagaacctgctgtta
gtcctccagtatatgtacaatgccaacagcaagattccagaacctaaaaggatgccagaa
agcgacttttatttgttgactgacacaaactttctttgtgaggatctgctgctttggcgt
ttacggtcacaacacaagaacgggaatgctgagcctcttatcctttgtaactttccattt
gtgatggatctgcagtcaaagaaaatggtttttgacaagaatgctgaatacacaaagttg
gaaacaatgaggcacgtcttcttctggggttctcttttggaatttgtatggccaccacct
ggagccctggtctttatactggacctgaggagagcatcagttttggaagacacctttgac
caactggctgctgctcatcacaatgactacaagaagccacttgtggttttttttgatgaa
aaccgtacatttgatgaggtttccataaaagacttcttctacgaagtgtttcacgagatg
gtgtcaactgagtttgggatgttcatgttcaacaactctacgaaagacagcaaaacgctg
gcgtggttcccttccacagctacacaggaggaccagagatacttcctgtttggggttctg
tgcggaatggctttgtaccaccggtgcatcatatacttacccttcccactggctctgttc
aagaagctgctcagtgtaaagccttcactggaggatatgatagaattcagcccatgtgtt
ggaaagagtctgcaggacattcttgaagactgcaacgatgatgatgacctatacatggat
ttttcagtcaactgggatgggacagaggttgatcttgatcctcaagtccctggaaagcca
gtgacgagtcgaaataagaaggagtttgtggacgcctacgtgaatcatgcatttaataca
tcagtggagggtgtgtttcatgagttcaagcgaggcttctacctggtgtgtgaccgggat
ctggtcaagctgtttcggccagaggagctgcaggaagtgctggtgggcaaagacttccgt
gactgggcaaagctgaaacagagcacaagttatgagggggagtaccatgttggccacccc
accatacagatgttttgggaggtttttgatgaactaactgaggatcagaagaaggctttc
ctttggtttgtgacaggttttgaaagagagcctattcttggcttggaaaagatcaagatg
acagtcagagttggacaagtccaggacctctcttatgaccagcactaccctgagacacac
acgtgtttctcaatcctggagctgcccttatactcaaccaaggagatcatgcaaaccaag
ctgacagaggcgctgagaaaaaatagaagaatctgcaagtga
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