Micropterus salmoides (largemouth bass): 119893705
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Entry
119893705 CDS
T07309
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119893705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119893705
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119893705
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
HECT type E3
119893705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119893705
NCBI-ProteinID:
XP_038561957
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MFSWGEDSKQGFRSRDGANISAGDGGHLLNLSFRITDLSAGHSALAFIKSSGDAYIIRTN
ESKDGRRARGKQKFVKCQEKIQAVGCGDDMVTLLSETGKVLCVDTAHTPLIPRPLEALNN
IPVSQVACGSQHAAALTKDGHVYTWGQDSRGQLGLGKRKSGAYSPQHLRSLSAIPLVQIA
AGGEQSFALSVSGGVFGWGRNDCGQLGLGDTADRHTPTPVHCLNMKKTVQISCGKDHTAA
LTKDGAVFTFGSGKYGQLGHNSFSDELRPRLVAELWGAKVTKIACGRHHTLVLTNSKRVY
SFGCGEQGQLGHGEESHSSVPLPVQLQQDTTNGPIIRNIYAGGNCSFATCTSIQEVNEES
NTNSANNVTQNSIDDMIDKWISKCDSKSWKRIKQEIHKMFSSASFVNQYFVDQSKDKHFQ
TSPKCSGLDLSLAQLAFEKLVRKDDVLKEVEAAVLQLLPSLDEKPVGVEGLRIFLLLTEL
LHVIQGHKKRWSTELAEAVAAALLRLSAESLQIIGNWWSSLSYSTMVKHVKVWKHALSVI
LSFEPVPRSSGVKNLMLVLQYMYNANNRIAGRQRIPEKTFCLGISEIFLEEDLQLWRSMS
KIKDMNDQPLILCNFPFVMDLKSKKMAFDINVAHTQIENQVPPKMVFIWPYGWVPETNRF
ELKLKRASLLEGTFTQLAAAPHSAFKKPLLVYLDEDTKVTDVYKRDFFHHLFHDVFSAKS
GMFLFNDSKTLAWFSSKATEEDKTNFFLFGVLCGLALYNKSIIHLPFPLALFKKLLGVAP
TLEDMMEFSPAVGKSLQYVLHYDDDDLESLCQSFLIDWDGTEVDLDPQNPEKPVTSQNKN
EFVDTYVNHVFNTSVEGVFQEFERGFYLVCDRDLVKMFRPEELQGVLVGKDVYDWAKLKQ
NTLYELQYIGHPIMRMFWEVFDELTEDQKKDFLWFLTGFRRVPVLGMDQIKMTIFIKQIQ
SASYDQHFPESLTCHSYLYLPLYSTKEIMRDRLTEALIPESGFLM
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggacagtaagcagggctttcggtcgagagatggagcaaatatc
tcagcaggtgatggaggtcacctcttaaacctcagtttccgcatcacggatctgtcagcg
ggtcacagcgcgctcgccttcatcaaaagtagcggagacgcgtacatcattcgcacaaat
gagagcaaagacgggaggagagccagaggaaagcagaagttcgtgaaatgtcaggagaag
atccaggctgtgggttgtggcgatgatatggtcacactgctgtctgagacgggcaaagtg
ctctgcgtggacacagctcacactcctttgattccaaggcccctggaagctctgaataac
ataccagtttctcaggttgcttgtgggagccagcatgcagctgccctgaccaaagatggt
catgtatacacatggggccaggactccaggggccagctgggtctggggaagaggaagtca
ggcgcttattcaccccaacacctccgatctctgtcagcgatccccctggttcagatcgct
gcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggctggggcaga
aatgactgtggacagctcgggctgggagacacagcagacagacatacaccaactcctgtt
cattgcctgaacatgaagaaaactgttcaaatttcctgtggaaaggaccacactgccgcc
ctgacaaaggacggtgcagtgtttacatttggctctggtaaatatggacagcttgggcac
aactctttcagcgatgaactacgacctcggcttgttgcagagctctggggggcaaaggtc
accaagattgcatgtggacgacatcacacattagtgttaacaaactccaagagggtctac
tcctttgggtgcggagaacaagggcagctgggacacggagaggagagccattcgtctgtg
ccgttacctgttcaactgcaacaagacaccactaatggtcccattattagaaacatctat
gcaggaggaaactgttcgtttgcaacgtgcacatctattcaggaagttaatgaggagtca
aacactaatagtgccaacaacgttacgcagaactctattgatgatatgattgacaaatgg
atctcgaaatgtgattcaaaatcatggaaaaggataaaacaggaaatccacaaaatgttt
tcctctgcatcctttgtgaatcagtatttcgttgaccaaagcaaagataaacatttccag
acttcaccaaaatgctccggcctggacttatcacttgcacaacttgcttttgagaaacta
gtgaggaaggatgatgttttgaaagaggttgaggctgctgttctgcagttgcttccctct
cttgatgagaaaccagtgggagtggaggggttgaggatcttcctgcttctcactgagctt
ctgcatgtgatccagggacacaaaaagcgatggagcacagagctcgcggaggcggttgct
gctgccttactaagactctctgctgaaagcctccaaatcatagggaactggtggtcctca
ctgtcgtactccaccatggttaaacatgttaaagtgtggaagcatgccctctcagtgatc
ctgtcctttgagcctgttcctcgcagttctggagtcaaaaacctgatgctagtcctccag
tatatgtacaatgccaacaacaggattgcaggacgtcagagaattccagaaaaaactttt
tgtttggggattagtgaaatatttcttgaagaggatctgcagctttggcgttcaatgtca
aaaatcaaggatatgaatgatcagccactaattctttgcaacttcccatttgtcatggat
ctgaaatcaaagaaaatggcttttgacattaatgtggcacacactcagatagaaaaccag
gtgcctccaaagatggttttcatctggccttatggatgggttccagagactaatagattt
gaactgaagctgaagcgagcgtcacttttggaaggcaccttcacacaactggctgctgct
cctcacagtgccttcaagaagccacttttggtctatttggatgaggacacaaaagtcaca
gatgtctacaaaagagacttttttcaccacttgtttcatgacgtgttttcagctaaatct
ggaatgttcttatttaatgactccaaaacactggcatggttctcctccaaagcaacagag
gaggacaagacaaacttcttcctgtttggggttctgtgtggattggccttgtacaacaag
agtatcatacacttacccttcccactggctctgttcaagaagctgctcggtgtggcgccg
acgctggaggatatgatggaatttagtccagctgttggaaagagtctgcagtacgtcttg
cactatgacgatgatgatctagaaagcctttgccagagttttttgattgactgggatggg
acagaggttgatcttgatcctcaaaaccctgaaaagccagtgacgagtcaaaataagaat
gagtttgtggacacctacgtgaatcacgtcttcaacacatcagtggagggtgtgtttcag
gagttcgagcgaggcttctacctggtgtgtgaccgggatctggtgaagatgtttcggcca
gaggagctgcagggagtgctggtgggcaaagatgtctatgactgggcaaagctgaaacag
aacaccctttatgagttgcaatatattggccaccccatcatgcggatgttttgggaggtt
tttgatgaactgacagaagaccagaagaaagatttcctttggttcctgactggttttcgg
agggttcctgtgcttggcatggaccaaatcaagatgacgatttttataaagcaaattcag
agcgcctcttacgatcaacacttccctgagtctctgacatgtcactcatatctgtacctg
cccttgtactcaaccaaggagatcatgcgagacaggctgacagaggccctgataccagag
agcggattcttgatgtga
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