Micropterus salmoides (largemouth bass): 119893917
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Entry
119893917 CDS
T07309
Symbol
myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119893917 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119893917 (myo5c)
04131 Membrane trafficking [BR:
msam04131
]
119893917 (myo5c)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119893917 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119893917 (myo5c)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119893917 (myo5c)
mRNA cycle factors
P-body specific factors
119893917 (myo5c)
Membrane trafficking [BR:
msam04131
]
Others
Actin-binding proteins
Myosins
119893917 (myo5c)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119893917 (myo5c)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119893917 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
ERM_helical
AAA_16
AAA_22
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119893917
NCBI-ProteinID:
XP_038562250
LinkDB
All DBs
Position
Unknown
AA seq
1747 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIIKDFHIGNNVLDLLLEDGTEYFYPVDTSKPELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARFAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYKIIGANMR
TYLLEKSRVIFQADNERNYHIFYQMCSCAHLPEFKNLRLLSADKFRYTCMGGEITIEGVD
DKKDMEETRRTFSLLSLASSGLKEDFQSDVFKVLAAILHLGNVEIRNNGEDKSSVPPSDP
HLVVFCELLGVSAEGLVRWLCHRRIILVAETVVKPMPKERAVNARDALAKQIYAHLFDCI
INRINTALQVPGKQHAFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQE
EYMKEDIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDTNP
LFEKPRLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRSSKFPFLANFFQEEE
QSTVNSRGVKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDE
KLPFEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADLSDKKQ
TCRNVLQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRK
YLRMREAAIILQEYIRGKRTVRKTVSAVTLKQGWATVVLQRHWRGYRMRQIYQVVRLASI
TIQAFTRGWMARKRYKKMMKEQKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLR
KKIEEQNKENRGLMERLTSLANSNSQTMDRLQRLESQLEKSNNQNASLEAREKKAKEDAS
LTIAQLQKEMDALSLEKQNLEKRFEASTKEAKESFDQIKRDLLEEKEYEARLRKIAENNI
EIQRHDHEKEVETLKEEMKRLKEERVSLQRKLEEGEQVNSDLQEQVIQLTKHVKAIPELR
RDLSNLQNQRNSIDRRMKQHSEQARAKMNEIMRQLLGGVVEEEVLLGLSPKNCEKIYEVE
DLLEAFDGLQKATRILENHQREQKESYETQVEGLKLKVDHLQNENSKLQNLFQEKSNVNE
NIREEVSRLSSENSVIPELKLQVSELQRQKQELEAHVEEQSRELADKTEEITNVLQRKIN
EESSQRRHLEEKAEELEELKRELQGRVEELEEENNHLKRQQLMESEVKSKLRQETSRLTA
ENMDFEEQLDQKDTLIKKLQNQIRSLEASQKAKQTSTPAIPKDYLGMLEYKREDEPRLIQ
NIILDLKPKGVAVNMIPNLPAHILFMCIRHADYLNDEAKLKSLMNASIGAVKKVIMSHLK
DFELLSFWLSNTYQLLNCLKQYSGEEEFMKQNTPHQKKNCLKNFDLSEHRQILSDLAIHI
YHQFITVMEKTIAPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYTISSIIQQL
TDFHSTMSQHGMEQGLIKQAVKQLFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEE
WLKEKDLQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEITEQCPELNPVQIVKILNSYTP
XDDFEKRVTSSFVRKVQSLLQGREGSTQLMQDLDYRFQVMFPYCPSSQALELLQVPSSLH
LGFLTRI
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactttacaccgagtacaacagagtgtggattccagatgcagaacat
gtgtggaaatcagccgagattataaaagactttcatattgggaataatgttcttgatttg
cttcttgaagatggcactgagtacttttaccctgttgacacttcaaaaccagaactccct
cctcttcgcaaccctgacatcttggtgggggagaatgacctcaccgctctcagctacctg
catgaacctgcagtcctgcataaccttaaagtgcgatttgtggagtcgagaatcatctat
acttactgtggtattatactggtggctgtgaatccatacaaacagcttcctatctatgga
gatgcaatcattcatgcctactcaggccaaaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtcgatcatt
gtcagtggtgagtctggagcaggtaaaactgtgtctgctcgatttgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagataaagtcctggcgtccaat
ccgataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtacaagatcattggagcaaacatgagg
acctatctcttagagaaatccagagtcattttccaggcagacaatgagcgaaactatcac
atattctaccagatgtgttcctgtgctcacctgccagagttcaagaatctaagactgttg
agtgcagataagttccggtacacctgcatgggcggtgagatcaccattgaaggtgtagat
gacaagaaagacatggaagagacccggcggaccttctccctcctctctcttgcttcttca
ggtttgaaggaggactttcaatcagatgtgttcaaggttttggcagccattctgcatttg
ggaaatgtggaaatcagaaacaacggcgaggacaaatcatcagtccctcccagtgatcca
cacctggtagtcttctgtgagttactgggtgtgagtgcagaggggttggtgcgttggctg
tgccatcggaggatcattctggtggctgagacggtggtgaagccgatgcccaaggagcgg
gcagtaaatgccagagatgccctagccaagcagatctatgcccatctgtttgactgtatc
attaacaggataaacacagcactgcaggttccagggaagcaacatgctttcataggtgtt
ctggacatttatggctttgaaacatttgacgtcaacagctttgagcagttttgtatcaac
tatgcaaatgaaaagctgcaacagcagtttaacttgcatgtgttcaagctggagcaagag
gagtacatgaaagaggacatcccatggacgttgattgatttctatgacaatcagccggtc
attgacctgattgaagcgaagatggggatccttgacttgcttgatgaagaatgtttgttt
ccccagggcaccgatcaaagctggctgcaaaagctattcaactacctagataccaatcct
ttgtttgagaagcctaggctatcaaatgaggcatttgtgattcaacactttgcagacaag
gtggaatatcaatgcagaggtttccttgaaaagaacagagacactctctatgaagagctg
gttgacattatgagaagcagtaagtttccttttctggccaactttttccaagaggaggag
caaagcactgtgaatagtagaggtgtcaaagtgaggcctgccaggcctggagtgaaacca
gccaataaacagctgagaacctcggtgggagataagttctgcagctccctctctttactg
atggaaacactgaatgccaccacccctcactatgtgcgctgcattaagcccaatgatgaa
aagctcccatttgaatatgactccaggagagtggtgcagcagctgcgagcctgtggagtc
cttgaaactattcgtatcagtgcacagagctatccgtccaggtggacatacatagagttt
tacagccgatacagtatcctaatgtcacatcaggaggcggacctcagtgacaagaaacag
acctgcaggaacgtgctgcagaggttgatccaggaccccaaccagtacaagtttggtcgg
acaaagatcttcttccgagctggtcaggtagcttatctcgagaagctgcgcctagaccga
ctgagaggagcctgcgtgaccatccagaagcatgtccgcgggtggagccagaggaggaag
tatctgcgcatgagagaggcagccatcatcctccaagagtatatccgtggaaagaggaca
gtccgtaaaacggtgagtgctgtgacactgaagcagggctgggcaacagtggtgctccag
agacattggagaggttaccgcatgaggcagatctatcaggtcgtccgtctggcctccatc
acaatccaggccttcacacgaggttggatggctcgtaaacggtacaagaagatgatgaag
gaacagaaagccctggttctacagaagtatgccagagcatggctggtacgacgccgattt
caaaccatgcgtcggctggtgcttaacgtacagctctcctatagggtgcagcagctcaga
aagaagattgaagagcagaacaaagagaaccgtggattgatggaaagactgacaagcttg
gccaactccaattctcaaaccatggacagacttcagcgtctggagtcacagctggaaaaa
tcaaacaaccagaatgcgtctttggaggcaagggagaagaaagcgaaagaggacgctagt
ctgacaattgcacagctccaaaaggaaatggatgcattaagccttgaaaaacagaacttg
gagaaaagatttgaagcttccaccaaagaagccaaagagagttttgatcaaataaagagg
gatcttctggaagagaaagaatatgaagcaagacttagaaaaattgcagagaacaacatt
gagatccagagacacgaccatgagaaggaagtggaaactctgaaggaggagatgaagaga
ttgaaagaagagagagtcagtctacagagaaagttagaggagggggagcaggtgaactct
gacctgcaggaacaggtcatccagctcaccaaacatgttaaagccattcctgagctacgc
agagatctcagcaacctgcaaaatcagagaaatagcatagaccgaaggatgaagcaacac
tcggaacaagcaagagctaaaatgaacgagattatgagacaacttctgggtggtgttgtt
gaagaggaggttcttttggggctcagtcccaagaactgtgagaagatttatgaagttgaa
gatttgctggaagccttcgatggcctgcagaaagctaccagaatactggaaaaccaccaa
agggagcagaaggaaagctatgagacccaagtggagggcttgaaattgaaagtggaccac
ctccaaaatgagaacagcaagttgcaaaacctgttccaggagaaaagtaatgtcaatgag
aatattcgcgaagaggtgtccaggctcagcagtgagaactcagttatacccgagctgaaa
ctgcaggtttcagagctgcagagacaaaaacaagaattagaggcccatgtagaagaacag
agcagagaactagcagacaaaactgaggagatcactaacgttcttcaaaggaaaatcaac
gaagagagctcgcaacgcaggcaccttgaggagaaagctgaagagctagaggagttgaag
agggagctgcaaggccgagtggaggagctggaagaggagaataatcacttgaagaggcag
cagctgatggagagcgaggtcaagagcaaactgagacaggagacttcacggttaactgct
gagaatatggactttgaagagcagctcgaccagaaagacacattgataaagaaactccag
aatcaaataaggagccttgaagcatcacagaaagcaaagcaaacgtctacgcctgccatt
cccaaagattatcttggcatgttggagtacaagagagaggatgaacccaggctcattcaa
aacattattctggacctgaagcccaaaggcgtggctgttaatatgatccccaatctgccg
gctcacattctcttcatgtgcatccgccacgctgactacctgaacgatgaagccaaactc
aagtctcttatgaatgcgtccattggtgctgtcaaaaaggtcatcatgagtcacttaaaa
gactttgagttgctttcattttggctgtcaaacacgtatcagctgctcaactgtctgaag
cagtacagcggagaggaggagttcatgaaacaaaatactcctcaccagaaaaagaactgc
ttgaagaattttgatttgtcagaacacagacagattctcagtgacttggccatccacatc
taccatcagtttatcacggtcatggaaaagactatcgctcctgcaatcgttcctggcatg
ttggagcatgagagtttacaggggatttcgagcatgaagccgacaggtttcaggaaacgt
tccaacagcatctacgaggactctgagacatacaccatctcctccatcattcagcagctc
actgacttccactccaccatgagccagcatggcatggagcagggcctcatcaaacaggct
gtcaagcaactgttcttcctagttggtgcgaccaccctcaacaacatcatgctccgtaaa
gatatgtgttcctgcaggaaaggaatgcaaatcaggtgcaacatcagttacctggaggaa
tggctgaaggagaaggatctgcaaagctctaatgctatagacactttgaggccgttgtct
caggccgcctggcttctgcaagtcaacaagtccactgatgacgacgccaaggagatcact
gaacaatgtcctgaactcaaccccgttcagattgtcaaaattttgaactcctacacacca
nttgatgattttgagaaaagggtgacgtcgtcatttgtccgcaaagtccagtccttacta
caaggtcgtgaagggtccacacagctgatgcaggacttagactatcgtttccaggtcatg
tttccctactgcccgtcctcgcaggctctggagctgctgcaggtcccgagcagccttcat
ctgggtttcctaaccaggatctga
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integrated database retrieval system
