Micropterus salmoides (largemouth bass): 119893967
Help
Entry
119893967 CDS
T07309
Symbol
cspg4
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119893967 (cspg4)
04091 Lectins [BR:
msam04091
]
119893967 (cspg4)
Proteoglycans [BR:
msam00535
]
Cell surface proteoglycans
Others
119893967 (cspg4)
Lectins [BR:
msam04091
]
C-Type lectins
Others
119893967 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DAG1
Motif
Other DBs
NCBI-GeneID:
119893967
NCBI-ProteinID:
XP_038562330
LinkDB
All DBs
Position
Unknown
AA seq
2323 aa
AA seq
DB search
MRALNSVLVGAFLTLLLCLPSPGLGESYFGDSFCSLQAVQDVSTFHLSLQIKTSRRSGLL
LLAAGTEDYLFLELQNGKVQARMNLGAGEVTLSSSQGVQLNNLLEHKILLTLHDGKLTMT
IDELFPTYVPLNDDGEPLNIDLGIWLGGTGDLDAPYLSNAIPPFRGCMTQVKFESHQFDI
LSKAFKECHDTKESCSSEFEAGDGEATSFSTPDSFVSFPTWSGASGAPRVLEVLMKTTIE
DALLVFHPGRESDFIAIGVVKGYLKGVLDFGSGMEVLENNMVKLDDDQWHRVKVQVSEDS
FVIYVDSQFSSLTFNSSEKLDLVGNLYLGGIQKKMKDVFRESGSLNRAEEEELIIESFIG
CLSEIKINQKDRSLQDALVTKDVHVKCEGEDYDYSTYYDTDTTTTSPPVRNPYGDMDINE
QHCYPTDDTPEIFKNVTKLLDVTPLLVPEGGEVLLDINNLSPTFDLSAAGMRQSEIIFTL
QNDPWYGLVDMNINTRRTQKFTLLDVVNEKIKYMHDGNERHADQIELHVVVHTEGYLPEC
LKSPQKYVLPVEILPVNDIPQLGGGEITITENGRTRLSPSLIKIMDSDNRCDELVVTVTS
EPSTEVGYLENSQQPGISISEFTCRELKDGNIYFVHRAGNAAGITLEVSDGQSVSHSATF
KLSVAQPHMTIVTNTGLFLFQGSNASIGVQNLAVLAHPRYGDIIYNIIQPLLFGELQVMT
SDGMYKQVTTFHQSDLEQNHLRYVSTDSSDQEDILVEQIQFDVHLGHFSLSNNTFLVKII
PALVKVSNLVPLEMQAGEEQTIKLTELKAEIKGKNPDPQTVKYILIKPPTLGSLQLLDRE
LAEGDLFTQKDILDSIVSYRVRVQRAVNSIDQFQFRVLADDQYSPLYTFPINILAIADAP
VLTNERLVVLQGGELTLNKNYLWIQSPGITDFMFQVTQEPKYGRLIRDSPPGLPRFEGAI
RVFSSEDLQLGRLIYKHDGSKTSNDEFHFSAFNQGAEILDSQATVSGVFRISVQSKNEHA
PVRVVDRVFNVVRHGQRLLTTDVIQFKDDDSDFNDTQIVYAREGILSGNIISTSNPSQAL
FRFTQADLRDKNVLFIHHGADRERFSLQVSDGFHKTTALLQIQAGEPYLRIVNNTIIVID
HGSTKTLNTTLLSADSNMDIRDDSEIIFQVTSPPSDGRIIVSGIEASVFTQEDLKKGVVS
YEHNYESLRSKDSFSFTVQARGHSEEGTFRIKIFKQGYLSEPEVKTNEVIISYEGEHTII
NEDNLKVDQADILPTEMVFTIKEPPRLGHVVKLTNSSDSTASPVPNYIHSFTQEDIDQGH
ILYVSASIQGNDAFTVDVSNGFTTVEDLHISVKIVPRLIPIQTFNFTVKEGLSRAINTEI
VNISHPFYRSANIDFVVEEPPQHGEIRTQDGDELTYFTWEEMELGHIYYMHDSTESTEDS
FTLSATAYEIERRSLPVTISVTVIPVNDEPPKLTRNTGLEVLAGEEADITTSMLNTDDAD
TTAEELVYHVEVPTNGMVALKEAPEYSILNFTQAHINKGEVIFIHEGEDSGGFSFTVTDG
EHTSPLYRFVVTARPLTITMVTQEELMVFPGTRQPITGANLGAVTNEDGNEISYSLIRPP
RLGRLILANGRSQYEEITRFSQSQLESGAVYYEHQIPEEPFWVARDSIELTLSSQPAPEV
RHILPITISYYAAHSNTSSQLWKNKGLEIVQGQRKAIDESILDASNLLASLHEDEQGDVD
VVFEIRRFPDHGRITLDGQDLPRNAPSFMQEDINQGNLEYLHDDSGASFDSFSFRARLKS
ESRGVASPAECVLEEIFNISIKRRGSDPPELVTIDMLLEVLQGSMTIITQMHLNTQDEDS
PPDEVHFKVTKAPSNGRLVDSLTMDPISEFTQEMVNRGQVGFFSDGSLANGFVEFIVSDG
EHQTKPHTLHIGILARTLVLDKAPEIKVKQGDDETLVTEEMLRATTGGPVEEDILYKITS
VPKYAAVMVDRQPTSAFTQTQIKEGRVSVRFVKSTSPRDSVAFVARXRAANVSSVLNITV
QPLANIARDPLLPQGALVQLDRKLLDATPLANKTRTSPTFTVIQQPREARFVRSGGPEAG
QPVDTFSQKDLDEGRIAMEIANSSSRSQGSVTQDEARFLLKAYGVPPAECVLSFKTGPYN
ASGVYPATLLRIPSEASSKDSNDLPSVAGSPRSTPASPHWRGDMDWPHRDAPTTTSSHKK
PHVSRRSNFWSILIPILVILLLLLLAAILAYYLIRKNKTGKHNVQTAASKPKNGEVAGTE
TFRKTDPANNIPMSNMDSKDADPELLQHCRTTNPALKKNQYWV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgagagccctgaattcagtcctggtcggtgccttcctgaccctgctcctctgcctcccc
agccctggtcttggagaatcctactttggggacagcttctgcagtttacaagccgttcaa
gatgtctccaccttccacctgtcactacagatcaagactagtcggcgaagtgggctgctg
ttactggctgcaggaacagaggactacttgttccttgagctccaaaatgggaaagtacag
gcacggatgaacttgggggctggcgaggtgacactgtcctcatcccaaggagtacaactg
aacaaccttttggagcataaaatcttactcacactgcatgatggcaaactcaccatgaca
attgatgagctctttccgacatatgttcccttgaatgatgatggggaaccgctcaatatt
gacttgggcatttggcttggaggaacaggagacctggatgctccctacctcagcaatgct
attccccctttccgtggctgcatgactcaggtcaaatttgaatcccatcagtttgatatt
ctcagcaaagcatttaaagaatgccatgacacaaaggaatcctgcagcagtgagtttgag
gctggtgatggggaggcaactagtttcagcacacctgattcctttgtgtcattccccacc
tggagcggggctagtggtgctcctagggtcttagaggtcctaatgaaaaccaccattgag
gatgcgttacttgttttccaccctggccgagagtcagactttattgctattggtgttgtg
aaaggctatctcaaaggtgtgctggactttggcagtggcatggaggtactggagaataat
atggtaaagctggatgatgatcagtggcatagagtcaaggtacaggtcagtgaggattcc
tttgtcatttatgtagatagtcagttttcctccctcacttttaattcatcagaaaaattg
gacttggttggaaacttatatctgggaggcatccagaagaaaatgaaggatgtctttcgt
gagagcgggtccttaaatcgcgcagaagaggaggaattaataatcgaatccttcattggt
tgcttgtcggaaatcaaaataaatcagaaggatagaagcctccaggatgctttggtgacc
aaagacgttcatgttaaatgtgaaggagaggactatgactactcaacttactatgacaca
gacacaaccacaacttccccacctgttcgcaatccatatggtgatatggacatcaacgaa
cagcactgctacccaacagatgacacaccagagatattcaaaaatgtaacaaaacttctt
gatgtcaccccattgcttgtgcctgaaggtggagaagttcttcttgatatcaacaacctt
agccctacttttgacctcagtgctgcaggaatgcgtcagtctgagataatttttactctc
cagaatgatccctggtatggcttggttgacatgaacattaacacaagacgcacacaaaag
ttcactcttcttgatgttgtcaatgagaaaattaagtatatgcatgatggaaatgaaagg
catgcagatcaaatagagctacatgtggttgttcacactgagggctaccttccagaatgt
ttaaaatctcctcaaaagtatgtcctcccagttgaaattcttcccgtcaatgatatacca
caacttggtggaggagaaatcaccatcacagaaaatggcaggactcgtttgagtcccagc
cttatcaaaatcatggattctgacaaccgctgtgatgaattagtagtaactgtaacctca
gagccttcaacagaagttggttacttagaaaacagccaacagccaggaataagcatctca
gagttcacttgcagggagttgaaagatggaaatatctattttgtacacagagcgggtaat
gctgctggaattacactggaggtatctgatggacagtcagtaagtcactcagctactttt
aagttatctgtggcacagccacatatgactattgtcaccaatactggccttttcttgttc
caaggaagcaatgcatctataggtgttcaaaatctggctgtcctcgctcatcctcgttat
ggagatattatttataacattatacaacctctgctgtttggagaactacaggtgatgaca
agtgatggaatgtacaaacaggttacaacttttcatcaatccgatctggaacaaaaccac
cttaggtatgtcagcacagactcaagtgaccaggaagatattttggtcgagcagattcag
tttgatgtccacctagggcacttctccctcagtaacaacaccttcttagtcaagatcatt
ccagcactagtgaaagtttctaatctggttccactggagatgcaggccggtgaggagcaa
acaatcaaacttacagaacttaaagctgaaataaaagggaaaaacccagatccacaaact
gtaaaatacattctcattaagcctccaacgctcggtagtctccagctattagacagagag
ttggctgaaggtgacctcttcacacagaaggacattttggacagcattgttagctacagg
gtgcgtgtgcaaagagctgtgaatagtattgatcagtttcagttcagagtccttgctgat
gatcagtactcccctctatacaccttccctataaacatccttgcaattgcagatgctccc
gttctgaccaatgaaaggctggttgtcttacagggtggtgagctcactctgaacaaaaac
tatctttggatacagtctccaggtattacagattttatgttccaggtcacacaagaacca
aagtacggacgactaataagggattccccacccgggctgcctagatttgagggggcaata
agagtattcagcagtgaagacctccagcttggcaggcttatttacaagcatgatggctcc
aagacaagcaatgatgagttccatttttcagcatttaatcaaggagcggaaattctagac
agtcaggcaacagtgagtggtgttttcagaatttctgtccaatccaagaacgagcatgct
cctgtgagggttgtggatagagtcttcaatgtagttcgccacggtcagcgtctgttaaca
actgatgtcatccagtttaaggatgatgactctgatttcaatgacacccaaatcgtctac
gctcgtgagggaatcctttcaggcaatatcatctcaacatctaatccctcacaggccctt
ttccgtttcacacaagccgacctacgagataagaacgtcctcttcattcaccatggagca
gaccgggaacgcttctcactgcaggtttcagatggcttccacaagaccacggcactgctt
cagatccaggcaggtgagccgtacctgcgaatagtaaacaacacaatcattgtcatcgac
catggaagcaccaaaacacttaacaccaccctgttgagcgctgactctaacatggacatc
agagacgacagtgagatcatattccaggtcacatcaccacccagcgatggcaggattatt
gtgagtgggattgaagcttcagtgttcacccaagaggacctgaaaaaaggtgttgtgtca
tatgagcacaattatgagagtctgaggtccaaagactcctttagcttcaccgtccaagca
agaggacattctgaagagggcacatttaggattaaaatattcaagcaaggttacctctca
gagcctgaggtgaaaaccaacgaggtcatcatttcctatgagggggagcacaccataatc
aacgaggataatctcaaggtggatcaagctgatattttgcctacagagatggtgttcacc
attaaagagcctcctcgtctcggtcatgtggtcaagctgacaaacagctcagacagcact
gcttcacctgtccccaactacattcattccttcactcaagaggacattgatcaggggcac
attctctatgtgtctgcatccatccagggaaacgacgcattcacagtagatgtcagtaat
ggttttaccacagtggaggacctgcacatctccgtgaaaattgtgccacggctcatcccc
atccagaccttcaactttacagtgaaggaaggcctcagcagagcaattaacacagagatt
gttaacatctcacatcctttctacagatcagcaaacattgacttcgttgtagaagagcca
ccacagcatggggaaatccgcacccaggatggagacgaacttacttactttacatgggaa
gagatggaacttggacacatctactacatgcatgacagcaccgagagcacagaggacagt
tttacactctctgccacagcttatgagattgagcgccggagcctccctgtcaccatctca
gtgactgtcataccagtcaacgatgagccgccaaaactgacacgtaacacaggactggag
gttcttgctggagaggaagctgacatcaccaccagcatgctgaacactgatgatgctgat
accactgcagaggaactggtttaccacgttgaggtgccaaccaatgggatggtggcgttg
aaagaagcgcctgagtacagcatactaaatttcacacaggctcatataaacaaaggggag
gtcatcttcattcacgagggggaggattctggtggtttcagtttcacagtgacagacgga
gagcacacgtctcctctctaccgatttgttgtcacggccaggcctctcaccatcaccatg
gtaacgcaggaggagctcatggtatttccaggaacaaggcagcccatcacgggtgccaat
ctgggggctgtaaccaatgaggatggaaatgagataagctactcacttatccgcccaccc
cgtttgggaagacttatcctggccaatggcaggagccagtatgaggaaattacccgcttc
tcacaatcacagctggagtcaggagcagtctactatgagcaccagatacctgaggaacca
ttttgggtagcaagggactccatagagcttactctgtcatcccagccagccccagaggtc
cgtcacatcctgcccatcaccatctcttactatgctgctcacagcaacacctcctcacag
ctgtggaagaacaaaggtctggaaattgtgcaaggacagaggaaagccattgacgaatca
attcttgacgcctccaaccttctggctagcctacatgaagatgagcagggtgatgtggat
gtggtttttgagattaggcgtttccctgaccacggacgtatcaccctggatggtcaggac
cttccccgtaatgccccatccttcatgcaggaagatataaatcaaggaaacctggagtat
ctccatgatgactcaggggcctcttttgacagtttctctttcagggcccgtctaaagtct
gagagccgtggtgtggcctcacctgccgaatgtgtcctagaggagatctttaacatctca
atcaaacggcggggctctgatcctcccgaactagtcactatagacatgctcttggaggtt
cttcaaggctccatgactatcataacccagatgcatcttaacactcaagacgaggacagt
ccaccagacgaggtgcactttaaagtgaccaaagcccctagcaacggtcgactagttgac
tccctcacaatggaccccatctctgagttcacacaagagatggtcaaccgtgggcaggtg
ggcttcttcagcgatggcagccttgccaatggctttgtggaattcattgtgtcagatgga
gagcaccaaacaaagccacacacgctccacattggcatcctagctcgcaccctggttctt
gacaaagcccctgagattaaggtgaaacaaggcgatgatgagaccctggtgacggaggag
atgttgagggccactactgggggccctgttgaggaggacatcctttacaagatcacaagt
gttcctaagtatgcagctgtcatggtagatcggcagcctacatccgccttcacccagaca
cagatcaaagaaggcagagtcagtgtccgctttgtcaagtccacttcacctcgagacagt
gttgcatttgtagcccgcnagcgggctgctaatgtctcctctgtcctcaacatcacagtc
cagcctctggccaacattgcccgggatcctctcttaccccaaggtgctcttgtccaactg
gacaggaagcttctggatgcaactcccctggcaaacaagaccagaacctcccccacgttc
actgtcatccaacagccaagagaggctcgttttgtgaggtctggaggtcctgaggcaggc
cagccagtggacacattcagccagaaggacctggatgagggccgtatagctatggaaatt
gcaaatagctcttccagatcacaaggtagtgtcactcaggacgaggctcgcttcttgctc
aaagcctatggggttccccctgcagaatgtgtgctatcgttcaagacaggcccctacaat
gcctctggggtttacccagccacgttgttgaggattccctcagaagcctcatcaaaggac
agtaatgatcttcccagtgtggctggttcccctcgttccactccagctagtccccactgg
aggggcgacatggactggccccacagagatgcccccactacaacatcttcccacaagaaa
ccccatgtttcccggcgcagcaacttctggtctattctcatcccgatcctggtaatcctc
ctcctcttgctgctggcagccatcttggcatactacctgatccgtaaaaacaagaccggc
aagcacaacgtccagacagcagcatccaagcccaaaaatggagaggtggccggcacagaa
acctttcgcaaaactgacccagccaataacatacctatgtccaacatggattccaaagat
gcagacccagagttgttgcagcactgtcggacaacaaatccggccttgaaaaagaaccag
tactgggtctga
DBGET
integrated database retrieval system
