Micropterus salmoides (largemouth bass): 119893982
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Entry
119893982 CDS
T07309
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119893982 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119893982 (lrrc4ba)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
NGL family
119893982 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
HYDIN_VesB_CFA65-like_Ig
Motif
Other DBs
NCBI-GeneID:
119893982
NCBI-ProteinID:
XP_038562367
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MRIATLTCLSGPSPFLFLLAQLLLRLLLPGPELVGATSSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLVNLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVENPGESALVDINETFIRVHPGPTP
SGHLWPEGLPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTMTQS
GSSGIGGGQSLRLHHPEMVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGSGVGLNNNN
NPSPCSQSQNTSISCSQIPTSNSGGTPTGGTLPSPVPLPQLGLHNSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgcctttccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccccgggccggagttggtgggagccacctcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacttg
gaggaggtgcccgaaagcatatcagtcaacacgcgatacctcaacctgcaggagaactcc
atacaggttatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtaggcgcatttaatggcctccccaacctcaac
acactggagctgttcgacaaccgcctcacgctggtgccatcacatgcctttgagtacctc
agcaagctacgagagctgtggctgcgcaacaaccccattgagactctgccgggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggatctgggtgagctcaagaagttggatttc
atctctgatgcagcctttgtgggcctggtcaatctacgatacctgaacctgggcatgtgt
gggctgaaagacattcccaaactgacagctcttgtgcgtttggaggagctggagctgtca
ggaaaccggctggagatcatccgacctggttcctttcagggcctggtgtctctccgcaag
ctgtggctcatgcactcacaggtgtccgtcattgagcgcaatgcctttgatgacctgaaa
aaccttgaagagctcaacctgtcccataattccctgcactccttgccccatgacctcttc
acaccccttcaccagctggagagggtacaccttaaccacaacccctggatctgcaactgt
gatgtgctttggctgagctggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccatgctcccccattcttaaagggcaaatatattggagagcttgaccagagc
cacttcacctgctatgcgcctgtcattgtcgagccacctaccgacctcaatgtcactgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
acccctaatggcactttaatgacccatggctcttaccgggtgcggatatctgtcctgcat
gatggcacactcaacttcacgaatgtcactctgcgtgacactggccagtacacctgcatg
gtcaccaatgctgctggcaataccacagcaactgctgtcctcaatgtcactgctgctgat
gccagtgtcaactacacctactttacaacagttactgtggaaacagtggagaacccagga
gagtctgcattggtagacatcaatgagaccttcatccgtgttcacccaggccccactccc
tcgggccacctgtggccagaaggtcttcctaccacagcctcctctctgtcagctggctgg
tcctcctcgtctcctcgggccacccgacccaccttcactgtgcccatcactgagccaggc
ttctcaggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttcgtagcc
attacctttatggcagcggtgatgctggtggtcttctacaagctgaggaagcagcatcag
ttgcataaacaccacggccctgctcgtgccattgagatcatcaatgttgaggatgagctg
ggggccggagctagtggtcggggcagcggcatctcaggaggctccaccatgacgcagagc
ggaagcagtgggataggaggaggccagagcctcagactgcaccacccagagatggtcaac
ttgcctaacctggctcgatcggagcacctcaaccactactacaaaacccatcacttcaac
aacaacatgatgggcctgggcatgggcacaggttctggtgtgggcctcaacaacaacaac
aacccctcgccttgctctcagtctcaaaacacgtccatatcctgttcccagattccaacc
tccaacagtggaggaacgcccacaggtggcaccctgccctcccctgtgcccctgccccag
ttgggtctccacaattctctgaaaggccttatggggaaaagccagaatgagcccctgcta
tttaagagtggctccaaggaaaatgtgcaagagactcaaatttga
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