Micropterus salmoides (largemouth bass): 119894025
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Entry
119894025 CDS
T07309
Symbol
fan1
Name
(RefSeq) LOW QUALITY PROTEIN: fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119894025 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119894025 (fan1)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
119894025 (fan1)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
119894025 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
PRP21_like_P
SAP
Motif
Other DBs
NCBI-GeneID:
119894025
NCBI-ProteinID:
XP_038562437
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MQQRKTRRFSSSSSSSACTMSERATKDKLKRSLSLSKTKKKADAKTGISASAATTTPITS
FFSSQPPPKLACPLCGQLVPRFKINDHIDLQCQNFERGDSSAATASNSVVASIQLSPRRN
PQKSPEPGPNREQEVKETNTSPYFKKTNFQQAPREINRKGVVRTIDLGSLSSKLSRISYK
GPERTQPDNKHAPTYPEKEIYSSETLCSSSQKENLLIDTLGDKNDCLTTTSADPPLAVEN
LSCPDKRHYLEHKASKSETVQKLLTPKLHASSSKLAKRKKETTSTGRGSYLRKKAKYEGS
SRETEEVFSNESIAEATDTAQLKAEVPSTTTCDPPLSSQETYEKSDAAVNNDSLPESGHE
NGTSDHAAESSPPPRLPYYLRNFRTVLQAVLENEDDRALFDQHDMSFVHAFEKLSVMGQK
LYVRLFQRKLKWLQVNKLDYEEICSDLGPVAEELVRGGFLQTENDLQELSEALDLLPAPE
LKALAKTFHLGNSGTQKQQLVDGLLRLSRQKSLFSLTSAQNNIGAVILKRAKQLAGFCVX
LCLGPRAVFSRILLLFSLTDTMDEEETAAGGQNQLFTILLVNSGRLAFPDYTVQRASKVF
RDREDLIRYEASMRALQEVVSAMQGGQWEEAMQLYSAAKSAWQELRKKHDLSHQQELPVF
LRSFTTGWAYTRILSRGVEILQRLRRYEEAVEELRSLLLQSVYCPDSRGRWWDRLALNLH
QHLKKPEQAICAIRDGLSDPLVRTGHKLSLHQRAVRMKESASFKKYRLQLKDLPTIEVQD
VKHVTIRGQLFPHEGGTGKSMFLLPANREGEESANATVICSVEELSLAHYRQQGFDQGIH
GEGSTFSTLFALLLWDIIFMEGIPDVFRNPYQTCPLDLYTDCFYENRKEAIDSRVQLLSE
ASVVTLHDMLVDVWTSHEGKVCSLVNWERFSSLQQAQSLVSCMGGAFLGGVIARMSKDYR
HCRGGLPDLVVWNTSNNSYKLVEVKGPSDRLSQKQQIWLDELQKLGADVEVCHVVATGAR
GARLE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaagaaaaacgcgaaggttttcatcgagcagcagctcttctgcctgcaccatg
tccgagagagccaccaaagacaaactcaagcgaagtctgtctttgtccaagaccaagaag
aaagccgatgccaaaactgggatttctgccagtgcagccaccacaactccaatcacgtcg
ttcttcagcagccagcctccacccaagctggcctgccccctgtgtggccagttggtacca
agattcaagatcaatgatcacattgatttgcaatgtcagaactttgagagaggagacagc
agtgccgcaacagcaagtaatagtgttgtggcaagcatccagctgtcacccagaaggaat
ccccagaagtccccagagccgggtccaaacagagaacaagaggtcaaagagaccaatacc
agcccttatttcaaaaagactaactttcagcaggcaccacgggagataaaccgtaaaggc
gtggtcaggacgattgacctgggaagcctctcctccaagttatcgaggatatcttataag
ggacctgagaggacacagccagataataaacatgcaccaacgtatcctgaaaaggagatc
tattcttctgagactctctgtagcagctcacagaaggaaaatcttctgattgatacttta
ggagataaaaacgactgtttgacaacaaccagtgcagaccctccactagctgtggaaaat
ctgtcatgtccagataaaagacactatcttgaacacaaagcatctaaatcagagactgtg
caaaaactgcttactccaaagctgcatgcttcttcctccaaactagcaaagagaaaaaag
gaaacaacttccaccggtagggggtcttatttgagaaagaaagcaaaatatgaggggagc
agcagagagacagaggaggtgttttctaatgaaagtatagcagaggcaactgatacggcc
cagcttaaagctgaggtaccttctactactacttgtgacccccccctgagttcacaggaa
acatatgagaaaagtgatgcagcggtcaataatgattcactgccagagtctggtcacgag
aacggcactagtgaccatgctgctgagagctcaccccccccacggcttccctactacctc
cgtaacttccggaccgtactacaagctgtgctggagaatgaggacgacagggcattgttc
gaccagcatgatatgtcattcgtacatgcatttgagaagctctcagtcatggggcagaag
ctctatgtgagactctttcagaggaaactgaagtggctccaagtaaataaactggattat
gaagagatatgcagtgatctgggacctgttgctgaggagctggttcgaggtggttttcta
cagacagaaaatgacctccaggagttaagcgaggctctggatctcctgcctgctcctgaa
ctcaaagctctggctaagacgttccatctgggcaattctgggactcagaaacagcagcta
gtggatggacttctccgtctgagcaggcaaaaatccctcttctctctgacctctgcacaa
aacaacattggggctgtcattctcaaaagggcaaagcagcttgcaggtttctgtgtgnnt
ctttgtcttggtcctcgggctgtcttctctcgcatccttctactcttctctctgacggac
accatggatgaggaggagacggcagctggtgggcagaaccagctcttcaccatcctgctg
gtcaactcaggacgcctggccttcccagactacacagtgcagcgcgcatccaaggtgttc
agggacagagaggatcttatcagatatgaagcctccatgcgagccctgcaagaggtagtc
tcagctatgcagggaggtcagtgggaagaggccatgcagctttatagtgctgccaaaagt
gcctggcaggaactgaggaaaaaacatgacctcagtcaccagcaggagctacctgtgttc
ctgcgcagcttcaccacgggatgggcttacactcgcatcttgtccagaggagtggagatc
ttgcagaggctacgtcgctatgaggaagcagtagaggagctgcggtccttactgttacag
tctgtttactgtcctgacagccgtgggcgatggtgggacagactggcactaaaccttcac
cagcatctgaagaaacccgagcaagctatttgcgctatcagagatgggctgtcagaccct
ctggtgcggactgggcataagctctctcttcatcagagagcggttaggatgaaagagtct
gccagcttcaagaagtatcgcctgcaactaaaagacctgcccactattgaagtccaagat
gtcaaacatgtgaccatccgaggacagcttttccctcatgaggggggcacagggaaatct
atgtttcttttaccagcaaatagagagggggaagagagtgctaatgccactgtaatatgc
tctgtggaagagctgtctttagcacattaccgccaacaaggctttgaccaagggatccat
ggagagggctcaacattctcaacattgtttgcactactgctctgggacatcatttttatg
gagggtattccagatgttttcagaaatccgtaccagacatgtccactggatctttacacc
gactgtttctatgagaacagaaaagaggcgatcgactctcgtgtgcagttactcagcgag
gcatcagtggtgactctgcatgacatgttggtagatgtgtggacctcccatgagggtaaa
gtgtgttcattggtcaactgggagcgtttctcatcccttcaacaggcacagtctctcgtg
tcatgcatgggtggagccttcttaggaggggtaatagcacgaatgtctaaagactataga
cactgccgtgggggtttgcctgatttggtggtgtggaacacctcaaacaacagctacaag
ttggtggaggtgaagggccccagtgaccggctgtcccagaagcaacagatctggctggat
gagctgcagaaacttggggctgatgtggaggtgtgtcacgtggtggctactggagccaga
ggagctcgtctggaataa
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integrated database retrieval system
