Micropterus salmoides (largemouth bass): 119894038
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Entry
119894038 CDS
T07309
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119894038 (ppfia3)
Membrane trafficking [BR:
msam04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119894038 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF745
Tc-38
Motif
Other DBs
NCBI-GeneID:
119894038
NCBI-ProteinID:
XP_038562463
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGSSSPAGGGGGMGGGIGGIGGYGSRDPRLSGGGTDEGGSTGN
LESLMVNMLTERERLLESLRETQDSLGTAHLRMRELGHEKESLQRQLSIALPQEFAVLTK
ELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVS
SEVEVLKALKSLFEHHKALDEKVRERLRVALERVATLEEELQSSSQEVLSLREQIKRRQQ
GLDNGKERLPNGPSSILDDADIDRQREGEIERQRSELGQLKERLALMCRQVGEIEEQLTS
ARRELARSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENE
LASKESLYRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERH
GNFEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHLKER
MAALEEKNALSEELANMKKLQDDLLANKDQLIAELERLQLELDQLRARPGGSYSSRSLPG
SALELRYSHGGGSLPAGSTTHLDPFCNAPSGGVVRRSHRARWSSAREDSTKYPDWESGAL
LGTGFEPGLDVGCSDDEDDGEPRFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQE
EKENTELRAEEIESRVSVALDSPPIPPSSLGRDSTGRGFIPSSITSSTLASPSPPSSGHS
TPRLTHSPARESDRQNNKDDDRSLALLDSTPPSTPRALRLDRMALTHPGAMLDDPRDFRS
LSADGSSSNSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGRDGSASLASTPSEDQA
SGDPMGMNKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLELWVGMPAW
YVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASTRSS
TSNVWMTHAEMESLNAATKPPELKEFSWDQILAYGDMNHEWVGNDWLPSLGLPQYRSYFM
ESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRREESVHQN
KDVMVWSNERVMCWVQTLGLKEYADNLRESGVHGALLALDDTFDYTDLALLLQIPNQNTQ
ARQLLEQEYNSLISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSAETLPANFR
ASAISTPSVTLRKVQSDANSGARGESASVRTYSC
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctcggaggacgggcgcggcggcggaggcggctcg
tcttccccggcagggggtggaggaggaatgggaggagggataggaggcatagggggctat
ggcagccgggatccccgtctgagtggtggcggcaccgatgaggggggcagcacaggcaac
ctggagtcgcttatggtgaacatgctgacggagagggagaggctgctggagagcctgagg
gagacacaggacagtctggggacggcacatctacgcatgcgagagctgggccacgagaag
gagtcactccagaggcagctgtccattgccctgccacaggagtttgcagtgctgaccaaa
gagctgaacctctgccgagaacagctgctggagagagaggaggagatagcagagctgaag
gcagagaggaacaacacacgactgctgcttgaacatctggagtgcctggtatcccgtcac
gagcgcagcctgaggatgaccgtagtgaagaggcaggcccagtccccagccggggtctca
agcgaggtggaggtcctaaaagccctcaagtccctgttcgagcaccacaaagctctggat
gagaaagtgagggaaagactacgggtggctttggagcgagtggcaaccctagaggaagag
ctgcagtcctcatctcaagaagttctttctttaagggaacaaatcaaacgacggcagcaa
ggactagataatggcaaagagcgactccccaatggaccttcctccatcttagatgacgca
gacatcgacaggcagagggagggcgagatagagcggcagaggtcagagctgggacagctg
aaagagagactggccctcatgtgcagacaggttggagagatcgaggagcagctgacgtcc
gccaggagggagctggcccgatcggaggaggccaaccagaaactacagagggatgtgaaa
gaggcactctgtcaaagggaagacatggaagagagaatcaccacattagaacgcaggtac
ttgagtgcccagagggaggcgacgtctctccacgacataaaagataaactggagaacgag
ttggccagcaaagagtctctctacagacagagcgaggaaaagaaccggcagcttcaggaa
cgtctggatgatgccaaacagaagctgcagcaaactctgcagagggctgagacgctgcct
gagatcgaggcacaacttgcccagagagtggcagcactcaacaaggcagaggagcgtcat
ggtaactttgaggagcgactgcggcagatggaggcgcaactggaggagaagaaccaggag
ctacagagggcgaggcagagggagaggatgaacgatgaacacaacaagcgtctctccgac
actgtggacaagctactgtctgagtccaacgagaggctgcagctccatctgaaggagaga
atggccgccctggaagaaaagaatgccctatctgaggaactggctaacatgaaaaaactc
caggatgatctcttggcaaacaaggaccagctgatagcagagctggaaaggcttcagctg
gagttagatcagttgagagcgaggcccgggggctcttattccagtcgctctctgccaggt
agcgctctggagttaaggtattcccacgggggcgggtccctcccagcaggctccaccact
catctggatcccttctgtaacgctccctctgggggcgtggttagacgaagtcaccgggct
cgttggagctccgcacgagaggactcaaccaagtacccagactgggagagcggggctctg
ctggggaccgggttcgagccgggcttggatgtgggctgttccgacgacgaggacgacggg
gagcctcggtttggctccgagctgctgtccccgagtggacagactgacgtgcagaccctg
gccatcatgctgcaggaacagctggaggccattaataaggagatcaaactgatccaggag
gagaaggagaacacggagttgcgggccgaagagattgagagccgggtcagcgtggctttg
gacagtccgcccatcccgccatcctcccttgggagagacagcacaggacggggcttcatc
ccctcgtccatcacatcctccaccctggcctccccctctcctcccagctctggacattcc
acccctcgcctgactcactccccggcccgtgagagtgatagacagaacaacaaagatgat
gatcggtcccttgctcttcttgactctacgcctccttccactcctcgtgcactgcgcttg
gacaggatggccctcacccatccgggagcaatgcttgatgacccccgggactttcgcagt
ctctctgcagacggcagcagctccaacagcagccaagattctctccacaagtccagtaag
aagaaaagcatcaagtcttccatcggtcggctttttgggaagaaggagaaaggaaggatg
gggcaacctgggcgggatggatctgcttctcttgcatctacaccctctgaagaccaagcg
tctggagacccaatggggatgaacaagactgggactctgggtccagcagataaagaccgc
cgcagcaagaagaagcatgagctactggaagaagcatgtcgccaaggacttccctttgca
tcgtgggatggacccactgttgtatcttggttggagctgtgggtgggaatgccagcctgg
tacgtcgcagcctgtcgcgccaacgtgaagagtggcgcgatcatggccaacctttcggac
acagagatccagagggagatcggcatcagtaacccacttcaccggctcaaactgcggctg
gccatccaggaaatggtgtccctcaccagcccctctgccccggccagcactcgctcttcg
accagtaacgtgtggatgacccacgcagagatggagtctctgaacgctgccaccaagcct
ccggagctgaaagagttcagctgggatcagatactggcctatggcgatatgaatcacgag
tgggtgggcaacgactggctgcccagcctgggcctgccacagtaccgcagctatttcatg
gagtctctggtggatgcacgcatgttggaccacctgaccaagaaggagctgagagggcag
ctcaaaatggtggacagcttccacagggtcagtttgcattatggcatcatgtgcctgaag
cgtctcaattatgatcgcaaggagctggaaaggaggagagaggagagcgtccaccagaac
aaagatgtgatggtgtggtccaatgagcgtgtgatgtgctgggtgcagacactcggtctg
aaggagtacgccgacaaccttcgtgagagtggcgtacatggggctctgctggctttagat
gacacctttgactacacagacctggccctgctgctgcagatccccaatcagaacacacag
gccagacagctcctggagcaagagtacaactccctcatctccatggggactgagagacga
cctgatgaggatggaacgaagacgttcacccgctcaccctcctggaggaagatgtttagg
gagaaagacctacggggggtgacctctgactccgccgagaccctgcctgctaacttccgt
gcctcagccatctccacgccctccgttaccctgagaaaggttcagagtgatgccaactct
ggtgcccggggtgagtctgcctcagtgaggacgtactcctgttga
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