Micropterus salmoides (largemouth bass): 119894137
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Entry
119894137 CDS
T07309
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04620
Toll-like receptor signaling pathway
msam04621
NOD-like receptor signaling pathway
msam04622
RIG-I-like receptor signaling pathway
msam04623
Cytosolic DNA-sensing pathway
msam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119894137 (irf7)
04621 NOD-like receptor signaling pathway
119894137 (irf7)
04622 RIG-I-like receptor signaling pathway
119894137 (irf7)
04623 Cytosolic DNA-sensing pathway
119894137 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119894137 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119894137 (irf7)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119894137 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119894137
NCBI-ProteinID:
XP_038562613
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MQSPPKPQFASWLIEQVETGQYTGLCYVGQNKFRVPWKHNSRKDCNDMDSKIFRAWAVAS
GKIHEFPTDKARWKTNFRCALNNLEKRFKMIEDNSKNSDDPHKVYEIINTENIYERLPTQ
DSQEDSDIALDIYSSPTEFPSGNEHNLINDFMALDLVNLPSEEQPWAEKPYSAVVESYHV
APENHPLLLPDQPSYYVAANPEPVLNSPLQPTIYDLEISIHYRKREMLKGTFHTARLQLH
YLHEAPELNTNHLCFPSTDDLLDHKQIEFTNRILNSIQRGLLLEVRDTGIYALRQDRCHV
FASTSDPSVAHPDPRKLPQNTMVELLSFEKYVNELKQFKDNNGRSPEYTINMCFGEKFPD
GKLLEKKLIVVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLIYSVFGLPTT
EETARAAEPFLHQI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctcccaagcctcagtttgccagctggctcatagagcaagtggagacggga
cagtacacaggcctgtgctatgtgggccaaaacaagttcagagtcccgtggaaacacaac
tcaagaaaggactgcaatgatatggacagcaaaatattccgggcatgggcagtagcaagt
gggaaaatccatgagttccccactgacaaggccaggtggaaaaccaacttccgatgcgct
ctgaacaacctcgaaaagcgcttcaagatgatagaggataactccaagaattctgacgac
cctcataaagtctatgagattattaacactgagaacatttatgaaagactgccaacacaa
gactcccaggaggattctgacatcgctctagatatctacagctctcccacagagttcccc
tcaggaaatgagcacaatctgattaacgatttcatggccttggatcttgtcaaccttcca
tcagaggagcaaccgtgggcagagaagccctattcagctgttgttgaaagctatcatgta
gcacccgagaaccatccactgctgttaccagatcagccgtcttactacgtggcagcaaat
cctgagccggtcctcaactcacctctgcagccaaccatatatgacctggagatctccatc
cactacagaaaaagagaaatgctaaagggcacattccacactgcccgtctccagctccac
tacctccatgaggcccctgagctcaacaccaatcatctctgcttcccctccactgatgat
ctattggatcacaaacagattgaattcaccaaccgcatccttaacagcatccagagaggt
ctactcctggaggtacgggataccggtatctatgccttgaggcaggacagatgtcatgtg
tttgccagcaccagtgaccccagtgtggctcacccagacccaagaaagctgccccagaat
accatggtggagctcctcagttttgagaagtatgtgaatgaactgaaacagtttaaagac
aacaatgggcgctctccggagtacaccatcaacatgtgctttggagagaagtttcctgat
ggaaaacttttggagaagaagcttatcgtagtcaaggtggtccctctgatctgtcgacac
tttcatgagatggcccagatggagggggcttcatctcttcacagcgccaacgtcagccta
cagatctcacacaacagcctctatgatctcatctactctgtctttggtctgccaacaact
gaagagacagcacgggctgctgaaccttttctccaccagatttga
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