Micropterus salmoides (largemouth bass): 119894144
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Entry
119894144 CDS
T07309
Symbol
cd44b
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119894144 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119894144 (cd44b)
04090 CD molecules [BR:
msam04090
]
119894144 (cd44b)
00535 Proteoglycans [BR:
msam00535
]
119894144 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119894144 (cd44b)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119894144 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
119894144 (cd44b)
Exosomal proteins of colorectal cancer cells
119894144 (cd44b)
Exosomal proteins of bladder cancer cells
119894144 (cd44b)
CD molecules [BR:
msam04090
]
Proteins
119894144 (cd44b)
Proteoglycans [BR:
msam00535
]
Cell surface proteoglycans
Others
119894144 (cd44b)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Hyaluronan
Cell surface receptors
119894144 (cd44b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
DUF6480
Motif
Other DBs
NCBI-GeneID:
119894144
NCBI-ProteinID:
XP_038562627
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MWTLLLGVTFGLLASSRSEQLKVNSRSCSIARVFLVEGASRHSLNFDMAQKVCEQLQTTL
ASPEQVQEAYNQSMETCRYGWTNNMSVVILRLSHHENCAKNMTGFIINSRVDATENFDAL
CYDKKVGPELNCTEAFRTKDASAAEGQEETTPKAQPEDASDSEGGDPTVVSSKDPFMETT
PLATTNPEEPEHSVNVLDEITSGGSENNSEGFTFTTRELDQPTGSGMVPPSVDNVVASPT
APVGEVEPKRQDAITESPKQQPNDKGQVPGPDATEPGSLERSSSSNWLVIIGVIVAVAVI
LLVCAAVAKRNSWCGKQQTLIITPKDGEGNGAAASASSSHAQEREQEMVTLMNKEKIQEN
GNTEEFTVITLEESPDKEQLA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcttctcttgggggtcacctttggattactggcctcctccaggtcagaacaa
cttaaagtgaattctcgcagctgcagcattgccagggtgtttctggtggagggagcaagc
cgtcactccctgaactttgacatggctcaaaaggtgtgtgagcagctgcagacaaccttg
gcaagtccagaacaagtccaggaggcctataatcaaagcatggaaacgtgcaggtatggc
tggaccaacaatatgagcgttgtcatcctcagactcagccaccatgaaaactgtgcaaag
aacatgacagggttcattattaattcccgtgtagatgctacagaaaactttgatgcttta
tgctatgataaaaaagtcgggcctgagttgaactgtacggaagcatttcgaaccaaagat
gcatcagcagcagaaggccaagaagagaccactccaaaagcacaacctgaggatgcttcc
gatagtgagggtggagaccccacagtagtctcttcgaaagatcctttcatggaaactacc
ccattagccactactaatccagaggagccagaacattccgtgaatgttttggatgaaatc
acctctggtgggagtgagaacaacagtgaggggttcactttcactactagagagttagac
cagcccactggatctgggatggtgccaccatcggttgacaatgtggtagcctcaccaacg
gcccctgttggagaagtagagcctaaaagacaagatgccataacagagtctccaaagcaa
caacctaatgacaagggacaggtcccaggtcctgatgcgactgagcctggttcactggag
agaagtagttcatcaaactggctggttatcattggagtgattgtggcagttgctgttatt
cttcttgtgtgcgcagctgttgccaaaagaaacagctggtgcggcaaacagcagaccctg
attatcacacccaaagatggcgaggggaacggggcggcagcatctgcatccagctcgcac
gcccaggagagagagcaggaaatggtgaccctcatgaacaaggagaagatccaggagaac
ggcaacacggaggagttcaccgtcatcacgctagaggagtcaccagataaagaacagctg
gcatga
DBGET
integrated database retrieval system