Micropterus salmoides (largemouth bass): 119894266
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Entry
119894266 CDS
T07309
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119894266 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119894266 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
119894266
NCBI-ProteinID:
XP_038562858
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MIFIIFIVFLPVAQLQDLQDQCPGGSCNPQLGDLMVGRADQLSASSTCGLDGPQDYCIIG
YLEDEQKCFKCDSRLPYDRYSNPNSHRIENVITTFDPERKTRWWQSENGVHQVSLRLDLE
TVFQFSHLVLTFKSFRPTAMLVERSKDFGRSWKVFRYFAEDCSLHFPAVSNQAADSIDDV
ICDSRYSGSEPSTDGEVVLKALDPVFQIVNPYAQKIQDLITLTNIRVNFTRLFTLGDTLL
GRRRRNPQDKYYYALYNMVVRGSCFCNGHASQCTHVDRGRGDVFTQTGMVHGRCVCQHNT
AGENCEKCQDFHHDTPWRPGGVNTVNICRRCNCHGHSDSCHFDAAHFELTGGVSGGVCDD
CRHDRTGPRCERCRPFLYQDPQRATDDPHACIPCDCDPAGSQGGGLCDALTGQCVCKENV
EGRRCDRCKYGFFSLRQDDPAGCQVCRCHVMGSVGSCDQLTGSCECDRLASGPLCDRCLA
GFWGLGNSVFRCSPCDCDIGGAHSTTCSPEDGQCSCLPNMVGRRCSDPASGYFLAPLDYF
LYEAELAAPLHGGSSSSPSTPPSSSSFLNPDVPQCEQYFREQGYNFKFTNGRVVLVRRTR
GLVRRRRQGQVGHHYGLLWLRCILARNSQIVLQQNSIPLDPGHALQIVPRQRTVDQPITW
TGLGLVRVLEGGGLRFTVDNLPSSLDYQLVIRYEPKAPSDWLASVSIITALLGDGGCSNN
PTGSKPLILPGNSRGVILDSPVCLNAGGRYFVDVVFNKLPGSDGSSGSQILIDSMGLIPR
IESIEDFCSQSDLDSFRRFHCIGLASELGLQESVPDVCEGLIKSMSARIHNGAILCRCNV
IGSLGPFCSKLGGFCECKPNVIGRCCDTCAPLTFGFGPDGCKPCECDPRGSMSELCDQIR
GQCACRSEVTGRRCDRCQTGFWGFPFCRHCECNGLSEVCDEETGECLNCREHTTGPNCDR
CVEGYYGNPVSRQPCQSCLCPDVQSSGRFFATSCQQDPQSLSVTCNCREGHTGPRCDRCR
PGFYGNLVLPGARCEKCRCNNNIDPDDHHACDSLTGECLHCLYNTMGPRCQACRPAYYGN
ALDQDCKECSCDRRGTEVTQCPLGSPCFCDSRTGQCPCRRGVVGILCDACEEGYWNLDGA
SGCQPCSCDRLNSFSNTCNKVTGQCPCRLEFGGRQCDECGENHFGNPDLQCISCDCNMEG
TERPSCDPETGECICRTGITGIFCDECAPGNNSAFPACEECHPCTALWAENVTDVQRAVQ
RMRTLIPRQSHDLLPTDGHRQWMLEMHSKLDGLCNLTGLSPPKVKQVEKQYMMIGKLKDA
IGLNLILIDPSPLLNTEIDNIRLEFMKQLNNLKEKLMDDPDHADEDLEELQDEIQRLHTA
FMSDEKRVRNANKALEHSMDTRQEVKLKLSMCSSRDPVLLERKVKELSAVNLNLKICGGQ
GLEDCSGCGGALCGLNLGKRKCGGLNCDGVLSVSQMASETAERVKDKLILLPARLQESNS
KINDGKQAARDTKDLQHRINDNMDSFEREKKKTKDLILQVKDLMDERVPPEDIEKLTRAV
LDNQLPQSPNQIRSMINEISNLLASGTNFHDDLENLEEHARTTQDLLQKAKQLKEQTKNI
DVEEIRRDIYEAEKTQNKADSNLETASQDTDMTRDQVQGIKNKLNDIVTTLMNQSPEDMQ
DEIEALKKKTEQNREMTRAARDAADSALDNTPDTQTELDHVMKQFERLKQKNPNAAVQGE
ARLKNIMEEAEKMKRQMEDKLKLTLDLELRIQRLIKIKEDKATEVDKLLETVDSLQQEIS
KRAQGYISCTA
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcatcttcattgtttttcttccagttgctcagctccaggacctccaggac
cagtgccccggcggctcctgtaacccccagcttggtgacctgatggttggtcgagcggat
cagctgtcagcctcgtccacctgcggtctggatggaccacaggactactgcatcattgga
tacctggaggacgagcagaaatgcttcaagtgtgactcacggctgccgtacgatcgctat
agcaaccccaacagccatcgcatcgagaacgtcatcacgaccttcgaccctgagaggaag
acgaggtggtggcagtctgagaacggagttcatcaggtcagcctcaggttggatctggag
accgtgttccagttcagtcacctggtcctcaccttcaagagtttccgtccgacggccatg
ttggtggagcgatcgaaagattttggacgaagttggaaagtttttcgttactttgcagaa
gattgttctcttcattttcctgcagtgtccaatcaggcggctgacagcatcgatgacgtc
atctgtgacagcagatactctggatcagaaccgtccaccgacggagaggtggtgctgaaa
gctctcgatcccgtctttcaaatagtaaacccgtatgcacagaaaatccaagatctgatc
accttgacgaatatccgtgtgaacttcactcgtctcttcacgctgggcgacactctgctg
ggacgaagacgcaggaaccctcaggacaaatattactacgctctttacaacatggtggtc
cgaggcagctgcttctgtaacgggcacgccagccagtgtacacatgtggaccgtggacgg
ggggacgtcttcacccaaactggcatggttcacggtcgatgtgtttgtcagcacaacaca
gctggagagaactgtgagaaatgtcaagactttcaccacgacaccccctggaggccggga
ggagtaaacacagtcaacatctgcaggagatgtaactgtcacggtcactcggactcgtgt
cactttgatgccgctcactttgaattgactggcggagtgagcggtggcgtgtgtgatgac
tgccgccatgacaggacggggccccgttgtgaacgatgtcgaccttttctgtatcaggat
ccacaaagagcgacggatgacccgcacgcctgcataccatgtgactgcgacccagctggt
tcgcagggtggcggtctgtgtgatgctctgaccggtcaatgtgtctgtaaagaaaacgtg
gagggtcgacgctgcgatcgctgcaaatatggcttcttcagtctgagacaggacgaccca
gctggctgtcaggtgtgcaggtgtcatgttatgggaagtgtcgggtcatgtgatcagctg
acaggaagttgtgaatgtgatcgtttggcgagtggaccactttgtgatcgatgtctggcg
ggattctggggtttgggaaactcggtgttcagatgttcaccctgcgactgtgatatcgga
ggagctcacagcaccacgtgttctccggaggacggacagtgttcctgtttgcctaacatg
gtgggtcggcgctgctctgaccctgcctctgggtacttcctggctccactggactacttc
ctgtatgaggcagagctcgccgctccgctccacggaggaagctcttcttctccttctact
cctccttcatcatcttctttcctgaacccagatgtaccgcagtgtgagcagtatttcaga
gagcagggttacaactttaagttcactaacggacgagtcgttctagttcggaggactcgg
ggactcgtccgccggaggagacagggacaggtgggacatcattatgggctgctgtggctc
aggtgcattttggcccgtaactcccaaatagtgctgcagcagaatagcatccctttggac
ccgggtcacgccctgcagattgttcctcgtcagaggacagttgatcagccaatcacctgg
accggcctgggattggtcagagtgttggaggggggggggcttaggttcacagtggacaat
ctcccatcatcgttggattaccagctggtgattcgctacgagccaaaggctccatctgat
tggctggcttcagtcagcatcatcacagctttgctgggcgacggcggctgcagcaacaac
ccaacaggaagcaaacctctgattcttccaggaaattccagaggagttattctagactct
ccggtgtgtctgaatgcaggcggtcggtactttgtggatgtcgtatttaacaaactgccc
ggatctgatggctcctctggctcacagatcctgatcgactcgatgggtctgattccacgc
atagagtctatcgaagatttctgctcccagagcgacctcgactctttccgccgctttcac
tgcattggattggcttctgagcttggcctacaagaatcggtaccagacgtctgtgagggg
ctcatcaagagcatgtcggcacgaatccacaacggagccattctttgcaggtgtaatgtc
atcggctctcttggaccattctgcagtaaactgggaggattctgtgaatgcaagcccaat
gtgattggccgttgctgtgacacctgtgcaccactgacgtttggctttggacctgatggc
tgcaaaccatgtgagtgtgaccctcggggttcgatgtcagagctgtgtgatcagatcaga
ggtcagtgtgcgtgtcgttcagaggtaacgggtcgtcgctgtgatcgctgtcagacggga
ttctggggtttcccattctgtcgacactgtgaatgtaatggactgtcagaggtgtgtgat
gaagagaccggagaatgtttgaactgcagggagcacaccaccggaccaaactgtgacagg
tgtgtggaaggttactatggtaatcccgtctccagacagccctgtcagtcctgcctgtgt
ccagacgttcagagcagtggacgattcttcgccacttcctgccaacaggacccacaatcc
ctcagtgtgacctgtaattgcagggaagggcacacaggtccacgctgcgaccgatgccgc
cccggtttctatggtaacctggttttgccaggtgccaggtgcgagaagtgtcgctgcaac
aacaacatcgacccagacgaccaccacgcctgcgacagcctgacaggagaatgtctgcat
tgcctctacaacacaatgggaccccgctgccaagcctgcagacctgcttactatggcaat
gccctagaccaggattgcaaagagtgctcctgtgaccggcgggggacagaggtgactcag
tgtcctctggggagcccttgtttctgtgattcgaggacgggacagtgtccctgcaggagg
ggggtggtgggcatcctctgtgatgcgtgtgaggagggatactggaacctggatggagca
tcagggtgtcaaccctgcagctgtgatcgtcttaactctttctccaacacctgcaacaag
gtgacgggacagtgtccgtgtcgtcttgagtttggaggaagacagtgtgacgaatgtgga
gagaatcattttgggaatccagatctgcagtgtatctcttgtgactgtaacatggaggga
acggagcgaccgtcatgtgaccctgaaaccggggagtgtatctgtcggactggcatcact
ggtatcttctgtgatgagtgcgccccgggcaacaactcagcgtttccagcctgcgaggag
tgccacccctgcaccgccctctgggccgaaaatgtcacagatgtccagcgagccgtgcaa
aggatgagaactttgatccctcgccagagccacgacctgctgcccacagacggtcaccgg
cagtggatgctggagatgcactccaagctggacggcctctgcaacctgacgggcctctcc
ccaccgaaggtgaagcaggtggagaaacagtatatgatgattgggaagctaaaagacgcc
atcggcctgaacttgatcctgatcgacccgtctcctctcctcaacactgaaatcgacaac
attcgtttggagtttatgaagcagctgaacaacctgaaggagaaactcatggatgatcca
gaccatgcagatgaagacctagaggagctgcaggatgagatccagaggcttcatacagcc
ttcatgtcggatgagaagagggtcagaaatgccaacaaagctctggagcactcaatggac
accagacaggaagtcaaactcaaactgagcatgtgcagcagcagagacccagtgctgctg
gagaggaaggtcaaagagctaagcgcagtcaaccttaacctaaagatctgtggaggacaa
ggtctggaggactgttctggatgtggtggagctttgtgtggtctgaatctgggaaaaagg
aaatgtggcggtctaaactgtgatggagtactttctgtcagtcagatggcttcagagacg
gcagagagagtgaaggacaagctcatcctactcccagccagactgcaggagtccaacagc
aagatcaatgatggcaaacaggcggctcgggacaccaaagacctgcagcaccggatcaat
gacaacatggactcctttgagagagagaagaagaaaaccaaggatctcatcctgcaagtc
aaagacctgatggatgagagggttcctccagaagacattgagaaattgacccgagctgtt
ctggacaaccagctgccacaatcacctaatcagatccgatcaatgatcaatgagatcagt
aacctgctggccagtggcaccaatttccacgacgacctggagaacctggaggagcacgcc
aggactacccaagacctgctgcagaaagctaagcaactcaaggagcagacaaagaacatt
gatgtggaagagatccgcagagacatttatgaagcagagaaaactcagaacaaagctgac
agcaacctggaaacagccagccaagatacagacatgaccagagaccaagtccaaggcata
aaaaacaaactgaatgacattgtgacaacgctgatgaatcaaagtcctgaagatatgcag
gatgagattgaagccctgaagaagaaaactgaacagaacagagagatgaccagagcagcc
cgagatgctgcagactctgctttagacaacactcctgacacacaaacggagctggaccat
gtgatgaagcagtttgagcgcttaaagcagaaaaacccgaatgcggcggttcaaggtgaa
gctagacttaagaacatcatggaggaggcagaaaagatgaagagacagatggaggacaaa
ctcaaactgacactagatctggagttaaggatccagcggctgatcaagattaaagaggac
aaagcaactgaagttgacaagttgttggagacagtggattcacttcaacaggaaatctct
aaacgagcacaaggatacatcagctgtactgcataa
DBGET
integrated database retrieval system