Micropterus salmoides (largemouth bass): 119894369
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Entry
119894369 CDS
T07309
Symbol
si:ch211-59o9.10
Name
(RefSeq) E3 ubiquitin-protein ligase arkadia
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119894369 (si:ch211-59o9.10)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119894369 (si:ch211-59o9.10)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119894369 (si:ch211-59o9.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
RINGv
FANCL_C
Motif
Other DBs
NCBI-GeneID:
119894369
NCBI-ProteinID:
XP_038563005
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MDETFPGSPCSSEADSPGGLNRGCLLDPADVLYHDLSIIVPETPSPQLGKRRRRVLATEE
QFSPLAVAASPGRQELSTGSERAFSHKSKRRRLAAAMGEQGVGFVPASSLRAFPLCTWLE
APLSCSSSSSSSSSYLTPVSEEEALTATGSTVEASPAYVSQRRESPTSAAVSPSPPPSSD
SLSFLTAEERRWLNHEQGNTSAAAPEQIVISDDEEAVVRSAQVEEDEAFARSLQAQFDQE
EAHSTHQHHQHHLHHRSHYLHQQSHLLHQRSLHGCHPYMEPSWMPHLLAAVSPLVGFEDD
LIGQRRRRGRGRRRNGLPEFSEDLQGNDYEALLEFEERQGSVVSKKLSRREIQRFPTKTF
QSASNAGNTQCQICFCDYAEGEKLRMLPCFHNYHVQCIDRWLKDNATCPICRATPGRRRR
PRPPHL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgtttcccggcagtccctgttcgtctgaggcggacagtcctggaggtctg
aaccgaggctgcctcctggacccagctgacgtcctctatcatgacctctccatcatcgtc
ccggaaacacccagcccacagctcggcaaacggaggcgtcgcgttctcgccacagaggag
cagttcagtcctctggctgtcgccgcctctccgggacgacaggaactctccaccggcagc
gaacgagctttttctcataaatccaaacgcaggaggctggcggcggcgatgggggagcag
ggcgtcggctttgttccagcttcatctctgagggcttttcctctgtgcacctggctggag
gccccgctgtcctgctcctcctcctcttcctcctcctcctcctacctcacaccagtatca
gaggaggaggctctgactgcaacgggctccacggtagaagccagtcctgcgtatgtaagc
cagaggagagaaagcccgacttcagcggcggtttcgccctcaccgccgccatcctctgac
tctctgtccttcctgactgcagaggagaggagatggttgaaccacgagcaaggaaacacc
tcagcagctgcgccggagcagatcgtcatcagcgacgatgaggaggccgtggttcgctcg
gcgcaggtggaggaagacgaggcgtttgctcgaagcctgcaggcccagtttgaccaagag
gaggcgcacagcacacaccagcaccaccagcaccaccttcatcacaggagccattacctt
catcagcagagccatcttcttcatcagcggagccttcatgggtgccacccctacatggag
cccagctggatgcctcacctgctggctgccgtctctcctctggtcggctttgaagacgat
ctgattggtcagcgcagaagacgtgggcggggcagaaggaggaacggcctgccagagttt
tcagaagacctgcagggaaacgactatgaggctctcctggagttcgaggagcgtcagggt
tctgtcgtgtccaagaagttaagtcggagggaaatccagcggtttcccaccaaaaccttc
cagtctgcgagcaacgccgggaacactcagtgtcagatctgtttctgcgactacgctgaa
ggggagaagctcaggatgctgccctgcttccacaactaccacgtccagtgtatcgaccgc
tggttaaaggataacgccacctgccccatctgcagagccacacctggccgacggagacgc
cctcgccccccgcacctctga
DBGET
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