Micropterus salmoides (largemouth bass): 119894406
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Entry
119894406 CDS
T07309
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119894406
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119894406
04091 Lectins [BR:
msam04091
]
119894406
Proteoglycans [BR:
msam00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
119894406
Glycosaminoglycan binding proteins [BR:
msam00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119894406
Lectins [BR:
msam04091
]
C-Type lectins
Lecticans
119894406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
I-set
Ig_3
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
119894406
NCBI-ProteinID:
XP_038563064
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MTPLLLLCVSLPLISATILFKDHEDMDGTLRVSIPLEMPLRPLLGSKIVIPCYFQDNTVN
DPGAPTIAPLSHRIKWTYVTKEKVTTILVASKGKVNVETEYLDRVTMINYPLVPTDATLE
ITELRSKDSGTYRCEVINGIEDNYDSVDIQVQGIVFHYRAISTRYTLTFEKAKAACIQNG
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIQEPRERCYGDKETFPGVRTYGVRDVN
ETYDVYCFAEKMSGRVFYSMSVEKFTFYEAGDQCVKLGARLASTGELYLAWQAGMDVCNA
GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICFQDGEDDGAVP
GRTTPFPDIIRLTPAPAPYPEPTRFPVDEEIIGGEVDTLFPLPVPPSVTDTYSKVTPVVQ
EPGLDLTDMDTAMAPTGVVFHYRPITGRYTLTFLEAKQACKNIGAVIASSQQLQAAFEKG
LHQCDAGWLRDQTVRYPIVSPRDNCAGNLPHLPGVRSYGLRPASEHYDVFCYVERLQGEV
FFTSDYDSFSYDEAVQHCQKLNTTLATTGQLYAAWKQGLDKCRPGWLMDRSVRYPITTPR
SHCGGGQVGVHIIYAYPNQTGFPDEHSRYDAYCFKAEIPVVHVETETSENLTTVTVDVDV
INKTTVTIDHFAPMVYYNETETGLNITEVEELINKTTITTHAPTVRPILPPVSKSGSGSA
DHSATYSASGDDSGSGPSIILSGDTDFFSGDQSASGAPQEAEGGSAMIDTSGDVGSASGS
GEGLDRQHSGFSAMGSGFISGSGDISGSNKVFTIIMVDGKMVEVPKIHQKPTEQELGQGG
IDTSGAILESSTSGSGDLSGSGSGEISGISSVDHSAIDLTPQPSGEQEVSGYRIFESGFH
SGFPSGFPSGVSGSGSASGDSFQHHGDVIYITDTDLMEVTVPPLARHPQQGRGVVEISGE
GSGSGRHNDFSGTFSGSGDPHEKTTTEKLSVTLPPGSQITYTAYTSPPTTPSVSLATPAV
VAQPLVNAPANPCDPNPCSSGFCSVQGDLAVCQCPNGFTGEDCLTPGLGCAEGWLEFMGN
CYLHITKRDTWSEAEQHCQENKAHLVSITSEEEQKFVNSNGQDYQWIGLNDKDVQNEFRW
TDGSPRIFENWRPNQPDNYFNSGEDCVVMIWQEGGQWNDVPCNYHLPFTCKTGPVMCGAP
PEVKHGRPMGTSRERYPANSIVRYQCDAGYTQRHRPVVRCLPDGLWEEPQVECTEVGANS
NRLHKRSLWKRSKEFSSQQEQRKLL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgacccccctgcttctgctgtgtgtgtccttgcccctcatctctgcaacaatattgttt
aaagaccatgaagacatggatggcacgttgcgtgtcagcatccctttggagatgcctctc
cgtcctctcctgggcagcaagatagtgataccatgctactttcaagacaacacagtcaat
gaccctggagccccaaccattgccccgctgtctcaccgcatcaaatggacctacgtcacc
aaggagaaagtcaccacgatccttgtggcatcaaagggaaaagttaatgttgagacagaa
tatttggacagagtgacaatgatcaactacccactggtgcccactgatgccactctggag
ataacagagctgaggtccaaagattctggcacttaccgctgcgaggtgataaacggcatc
gaggacaactatgactctgtggacatccaggttcagggtattgtgttccattaccgagcc
atctccacccgctacaccctgacgtttgagaaggctaaggcagcctgtatccagaacggt
gccaccatcgccactccagcccagctccaggctgcttatgatgatggataccaccagtgt
gatgctggatggctctctgatcagactgttaggtaccccatccaggagccacgagagcgt
tgctatggagataaggagaccttccctggcgtgagaacctatggcgtgagagatgtcaac
gagacctacgacgtgtactgttttgctgagaagatgtcaggcagagtcttctactccatg
tctgtagagaagtttaccttctatgaagcaggagatcagtgtgtcaaacttggtgcccgg
cttgcctcaaccggagagctttacctggcctggcaggctggcatggatgtgtgtaatgct
ggctggctggcagacagaagtgtacgctaccccatcaatatcgccaggcctcagtgtgga
ggggggctcctgggagtgagaactgtctacttattccccaaccagacgggatacccctac
ccagactctcgctacgatgctatctgcttccaagatggtgaggatgatggtgccgtaccc
gggaggaccactcctttcccagacatcatccgcttaacacccgcccctgcgccgtaccca
gaacccacccgcttccctgtggatgaggagatcatcggtggagaagtcgacaccctcttc
ccactgcctgtcccacccagcgtgacagacacgtattctaaagtgacacctgtggtgcaa
gaacctggactcgatctgacagacatggatactgccatggctcccacaggtgtggtgttc
cactacagacccatcaccggtcggtacactctgacctttctggaagctaagcaggcctgc
aagaatattggggcggtcattgctagctcccagcaactgcaggcagcctttgagaaaggc
ctgcaccaatgtgacgctggctggctccgcgatcagactgtcaggtatcccatcgtgtca
cccagagataactgtgctggtaatctgccacacctcccaggagtcagatcctatggcctg
aggccagcaagcgaacattacgatgtattttgttacgtggaacgtctgcaaggtgaggtc
ttcttcaccagtgactatgacagcttctcctacgatgaggctgtgcagcactgtcagaaa
ctcaacaccaccctggccaccactgggcagctgtatgctgcctggaagcaaggtcttgac
aagtgtcgtccaggctggttgatggaccgcagcgtccgctaccccatcacaacccccagg
tcccattgtggaggtggtcaggttggggtccacatcatctatgcctaccccaaccagaca
gggtttcctgatgagcactcacgctacgacgcctactgttttaaagctgaaattcctgtt
gttcacgttgaaactgaaaccagtgagaatctgacgacagtgacagtggatgtggatgtt
attaacaagacaacagttacaattgatcactttgctcccatggtatactacaatgaaact
gaaactgggctaaatattactgaagtagaggagcttatcaacaagacaaccatcacaact
cacgctcctactgtgagacccattttacctccagtctccaaatccggctctggttcagct
gatcattcagccacctacagtgccagtggtgacgactctggttcaggaccaagcattatc
ctcagcggagatactgacttcttctctggagatcagtctgcctctggagctccgcaggag
gcagaagggggaagtgctatgattgacacatctggagatgttggtagtgcatctggatct
ggggaggggcttgacagacaacactctggcttcagtgcaatgggatcaggttttatcagt
ggaagtggggacatcagtggtagcaacaaagtcttcacgatcatcatggtggatgggaag
atggtggaggtgccgaaaattcaccagaaacccactgagcaggagttaggccagggaggc
attgataccagtggggccatcttggaatcaagcacgtctggatcaggagatttgtctggg
tcaggctctggtgaaatttctggcatctcatcagtcgaccacagtgccattgatctaaca
ccccagccgtctggtgagcaggaggtatctggatatcgcatctttgaatcagggttccac
agtggctttccaagtggttttccatctggtgtctcaggcagtggctctgcctctggggac
tctttccagcatcacggtgatgtcatttacataacagacactgatttgatggaagtgacc
gtaccgccactggcccgccaccctcagcagggccggggggtggtggagataagcggggaa
ggaagtgggtcagggaggcataatgacttcagtggcactttctcaggaagtggagaccct
catgaaaaaactaccactgagaagctttctgtcaccctaccacctggatctcagatcact
tacactgcttacaccagcccacccacaacaccatcagtgtcattagcaacccctgctgtt
gtggcgcagcctttagtgaatgcccctgcgaacccttgtgatccaaacccctgcagttca
ggattctgctctgtgcagggagatctcgctgtgtgtcagtgtcctaatggtttcactggt
gaagactgtttgacacctgggctgggctgtgccgaaggctggttggagttcatgggcaac
tgttatctccacattacgaagagagatacctggtctgaggctgagcaacactgtcaagag
aataaagcccatttggtcagcatcacttctgaggaggagcagaagtttgtcaactccaat
ggtcaggactaccagtggattggacttaatgacaaagatgtgcaaaatgagttccgctgg
acagacggcagtcctaggatctttgagaactggaggcccaaccagccagataactacttc
aactctggggaggactgtgtggtgatgatctggcaagagggcggacagtggaatgacgtg
ccctgcaactaccaccttccgttcacctgcaagactggacctgtcatgtgcggagctccc
cctgaggtcaaacacggccggccgatgggcactagcagagagcgctaccctgcaaactct
atagtccgctaccagtgtgatgcaggctacacacagcgccaccggcctgtcgtacgctgt
ctgccagacggactgtgggaggagccacaagtggaatgcacagaagttggcgccaacagt
aacaggctacacaaaagatccctctggaaaagaagtaaagagttcagcagccaacaggaa
cagaggaagctgctctga
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