Micropterus salmoides (largemouth bass): 119894714
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Entry
119894714 CDS
T07309
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03320
PPAR signaling pathway
msam04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119894714
03320 PPAR signaling pathway
119894714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119894714
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119894714
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119894714
Nuclear receptors [BR:
msam03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119894714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
119894714
NCBI-ProteinID:
XP_038563302
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSTVHTHPSHMGGMVGHPSVISTSRPLPSPMSSLGSPMNGLASPYPVITSSLGSPSVSLP
STPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGLQNLGNINYQCTSPGGMSKHICSICGDR
SSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLAMGMK
REGVCAAVQEERQRGKERGESEVESTSSFNEEMPVDKILDAELAVEPKTETYSDGSPSNS
TNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVTV
KDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMHMDKTELGCLRAIVLFNPDA
KGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLEAPHQIT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtccacacccatccctctcacatgggtggcatggtgggccacccgtcagtc
atcagcacctccaggcccttaccgtcccccatgtcctccttgggctcgccgatgaacggc
ctggcctcgccctaccccgtcattacatcttctctgggctcgccctctgtatcgctgccg
tccacccccaacatgaactttggaccactcagcagtccacagatgaattctatgaacagt
gttagcagctcagaggacatcaagcctccgccgggcctacagaacctgggaaacatcaac
taccagtgtacgagccccgggggaatgtcaaagcacatctgctccatttgcggggaccgc
tcctcaggaaagcactacggcgtgtacagctgcgagggatgcaaaggcttcttcaagaga
accgtccgtaaagatcttacctacacatgtcgagacagcaaggagtgcctgattgacaag
cggcagcgaaaccgctgccaatactgtcgctaccagaagtgcctggccatgggcatgaag
agagaaggtgtgtgtgcagcggtgcaggaagaaaggcagcgtgggaaggagcggggggag
agcgaggtggaatctaccagcagtttcaatgaggaaatgcctgtggacaagatcctggat
gctgagctggctgtggagcccaaaacagagacgtacagtgacggcagccccagcaactca
accaacgaccctgtcaccaatatctgccaagcagcagacaaacagctcttcaccttggtg
gagtgggccaaacggatccctcacttctctgaactcccccttgatgaccaggtcatccta
ctacgagcaggctggaacgagctccttatcgcctcattctcgcatcgctcagtcacggta
aaagatggcatcctgttggcgacgggcctccacgtccacagaagcagcgcccacagtgct
ggagtgggctctatctttgatagagtcctgacagagttggtatccaaaatgaaagatatg
cacatggataagacagagctcggctgcctgcgagccatcgtcctcttcaacccagatgca
aaaggtctctcaaacccaccagaggttgaggggctgagggaaaaggtttacgcctcattg
gaatcgtacacgaaacagaaatacccagaccagccgggcaggtttgccaagctgctactc
cgtctgcccgccctgcgctccatcggcctaaagtgtctggagcacctgttcttcttcaag
ctgattggggacacgcctatcgacaccttcctgatggagatgctggaggctccgcatcag
atcacatga
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