Micropterus salmoides (largemouth bass): 119895247
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Entry
119895247 CDS
T07309
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03030
DNA replication
msam03420
Nucleotide excision repair
msam03430
Mismatch repair
msam03440
Homologous recombination
msam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119895247
03420 Nucleotide excision repair
119895247
03430 Mismatch repair
119895247
03440 Homologous recombination
119895247
03460 Fanconi anemia pathway
119895247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119895247
03032 DNA replication proteins [BR:
msam03032
]
119895247
03400 DNA repair and recombination proteins [BR:
msam03400
]
119895247
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119895247
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119895247
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119895247
MMR (mismatch excision repair)
119895247
DSBR (double strand breaks repair)
HR (homologous recombination)
119895247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
119895247
NCBI-ProteinID:
XP_038564146
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MSVKLTQGAIRALLTGSELKDPVLQMLKICKVAAGSRFRLMMSDGQHSLSTFLLATQLHD
LLEENLLVPNCVCKLKKFVTSTLADARTVVTVMDMEILQSAEETGGTIGNPAPYNREGKT
SSPQSSPSSTSVPASPPSASVPGPSYKNNSTALFTPRGRGRGFVGKSPMKVSPSPSPMKV
SPSPSPMKVSPSPSPMKASPMKASPMKASPMKFSPMKFSPMKATSTSPGPSLKVIPIAHL
NPYQSKWTVRARVTNKSAIRTWSNSRGEGRLFSFEIVDESGEIKITAFNNEVDKFFSLVE
QGKVYYISKATLKVANKQYTTLKNDYEMTLHPHSSVVLCDDSVGIPSVHCDFVPIAELEN
RDKDAIIDVIGVCKSTEDVSRITTKTSREVSKRALNLIDTTGKMVTVTLWGEEAEKFDGS
RQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRGWYDREGCALNSQSLTEMR
SVGSRSKMDWKTLSDVKNEQMGHGEKADYFSCVATVLYTRKENCLYQACPSADCNKKVID
QQNGLYRCEKCNREFPNFKYRFLLSANLADFGDNQWVTCFQETAEVLLGHSAETLGQLRD
TDEAAFDEVFQKANFTTHIFKNRVKLETYNDESRVKVTVMDVQPVDHREYSRRLLSNIRK
LAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaactcacacagggcgcaattcgcgccctgctcaccggctcagagttgaaa
gatcccgtgctgcagatgctgaagatctgtaaggtcgctgcaggttccaggttcaggctc
atgatgagcgatggtcagcactcattgtctacattcctgctggccacacagttacacgat
ctgctagaagagaacctcctggttcccaactgcgtgtgtaagttgaagaagttcgtcacc
agcacactggcagatgccaggactgtggtgactgtgatggacatggagatattgcagtcg
gccgaggaaactggaggcacgattgggaatccggctccatataatagagagggtaagacg
tcctcaccacagagctcaccctcaagtacctctgttccagcatcccctccatctgcttca
gtacctggaccctcctataagaacaacagcacagccctttttactcccagaggacgtgga
agaggttttgtgggaaagtcgcccatgaaggtgtcgccgtcgccgtcgcccatgaaggtg
tcgccgtcaccgtcgcccatgaaggtgtcgccgtcgccatcgcccatgaaggcgtcgccc
atgaaggcgtcgcccatgaaggcgtcgcccatgaagttttcacccatgaagttttcaccc
atgaaggctaccagcacttctccaggtccttcattaaaagtgattcctattgctcacctc
aacccctaccaaagcaagtggactgtcagagcccgagtcaccaacaagtccgctatccgc
acctggagtaactctagaggagagggcaggctcttctcctttgagatagtggatgagagt
ggagaaatcaagatcacagccttcaacaacgaagtggacaagtttttctctctagtggag
caaggcaaggtgtactacatctccaaagctacactgaaggtggccaacaaacagtacacc
acactgaagaatgactacgagatgaccctccaccctcattcatccgttgtgctatgtgat
gacagtgtgggcatcccctcagtgcactgtgactttgtgcccattgcagagctggagaac
cgagacaaggatgccatcattgatgtgattggagtgtgtaagagtacggaggatgtatcc
cgtatcaccactaagacgagcagagaagtctccaagagagccctcaacctaatagacaca
actggcaaaatggtgacagtcacgttgtggggagaggaggcggagaagtttgacggctct
aggcagcctgtggtcgccataaaaggggctcgcttgtctgatttcgggggcagatctctc
tctgctttgttcagttcaacagtcatggtcaacccagacataccggaggcctttagacta
aggggctggtatgaccgggaaggctgtgcactcaacagccaatccctgacagagatgagg
tcagtgggaagcagatcaaagatggactggaaaacactgagtgacgttaagaacgaacaa
atgggacacggagagaaggcggactatttcagctgtgtggcaacagtgttgtacactcgt
aaggagaattgtctgtaccaggcctgtccatctgcagactgcaacaagaaggtcatagac
caacagaacggactgtaccgctgcgaaaagtgtaacagagagttcccaaacttcaaatac
agattcctactttctgctaacttagcagacttcggggataaccagtgggtgacatgcttc
caggagacagctgaggtcctgttaggtcacagtgcagaaacactgggacagctcagagac
acagatgaggctgcatttgatgaagtctttcagaaagccaacttcacaactcacatcttt
aaaaacagagtcaagctggaaacgtacaacgatgagagtcgggtgaaggtaactgtaatg
gatgtccaaccagtggaccacagggaatacagcaggagactcctcagtaacatccgcaaa
ttggccagctga
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integrated database retrieval system
