Micropterus salmoides (largemouth bass): 119895296
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Entry
119895296 CDS
T07309
Symbol
ncor1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119895296 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119895296 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119895296 (ncor1)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119895296 (ncor1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
119895296 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
119895296
NCBI-ProteinID:
XP_038564236
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFTVPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSITAQPEHEALEAKRPRMETVAEAQMTRTPPMAGGIVL
PLTHTVQDSLRATVEVKKESQFTVKVESPGGPTLHMGEEQDTSPSKLSKEELIQSMDRVD
REIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEE
AHKILEGLGPKVELPLYNQPSDTKXYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQ
RYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGL
SATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDSEQRRVKFINMNGLMDDPMK
VYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNYKT
LVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKSEKSEKKEDEEKKDEEEKDEKEDTRDI
GKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPSAPE
PALPDPPQLPKSDPAQKAMKEPAKPQTPIASMDANKAAAGETGETSRWTEEEMEVAKKGL
VEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGLA
TASPDDDDEDNADDSEGGDNSSDTESAPSPTQADSSKSGDSKRSDSAAGDAQCSDQDKGL
ASNGKAMEPSYGKLCVKEEKSPESETGSLDEKARMASYAGSVRPKTEPQDVDMKAGEVQV
KMEPEIKERGEKGDHGERLGELHSDNDSSATCSADEDVEAEPERQRMFAMEKPSLINPPG
SVLVSSPKQTQLNIQQLQQRAAAIPPMVPGAFGTSGVSMSGLTMLQHQIKAVHESAHQEE
KQRQDQGDLERRPPFNTRSPTILDRDGKPLTYMPYEMKLALDQEAHSGRPGSPYRLSPRE
LSKASPQLDPNAPNASRYSVPPVLHPAPNQLVQSMPDGVRVTFSRPSRPPNIPSPPPLIP
TTKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSAVGSISLGLPRQQDPNKPGAAV
PSIQDGRGNPAKMGEGLAFRGSITQGTPALPQSSIAADLLKSTITKLATEDLSSPDKARG
EQPKGHVIYEGKSGHIVSYDAIKNTRENTRSPRTGHEMKRTYDMMEVPMGRGHPGREGAP
FEGLISRALPRDGLHGDSKERPLITGSIMQGTPRTAAESYEDAMKYGKQIKRESPPIRSF
EGGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQGLEGSMSQIHPLNQSTIKHNVKSLIT
SPSKHPHSMPQLEAMERAKYEESKAVRHTVVNSTTSVLRSTHQEANKSQLSPGMYEDANA
RRTPVNYTTNPGSRGSPMLGRTPDGGMGSAKSAAHERKSAMTPTQRDSVPAKSPVSGGDP
VASHSPFDPHHRPVGPGEVYRAHLPPHLDPTMAFHRVLDPAFMFPRQPSPTGYHHNTYQL
YTMENTRQTILNDYITSQQMHPVIPRPDMARGLSPREQPAAIPYAAGARGIIDLAQMPPT
ILLPHPGGTGTPTMERIAYLPGAQPPFPHRAFNPTSISPGHQAHLAAAAAASAERERERE
QQDKEKEKEREREQREREREMRERERDRERTNEYIRGGGPEQPGRPGSRGYLHSPSPSLR
TQEVVVQQRPSIFQGKSVITSLIPHSTAVTTVAQNSSRYSTAADALAALVDAAVSAPQMD
VAKVKENKHERDDDMSSSAAGRRAASLSEQQQQQQQQQQQQQQQEAERRSMQSPYGGMSL
PGGKPHSAYSEVTGVGGKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKD
SRERGSQSSDSSSSLSSSRYDNTGGGAIEVISPASSPVQPQQDKPEEVQQQAATGMRAYD
MSRYRPSGEPPQPSGQQPPSSQADSYSQVPKTHRVMTLADHISHIITQDFARNQDPPVSS
ASATFQSVLPSMSSSGRAKMPSRYSPENQVQASHHQRPSSRVSPENAPDKSRARPGKSPE
RGGRQMENYEPISPPQSYQGMDKQEAGGPPPQRREADNSEIRSDSRSPGSVSYLPSFFTK
LENTSPMVKSKKQEIFRKLNSNSSVGDSDIGNAQPGTEIFNLPAVTSSSSINTRNHSFSD
PASNLGLEDIIRKALMGNLEERQEEHQGGVGSQGLNNTVSDGRQEANPSPSMGKQKQGKA
NSRKSKSPNLGQAYAGXERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNP
LTMRMLSSTPPTSIASPAIQSQQQQQQQQQQQQQQQQQAPTAGAPVAQQRVWQSLLSEQY
ETLSDSDD
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctaccctcccagtcaggggagcttcagcagcgagcagagcaga
tacccaccacattctgtccagtacacctttaccggcacgcgccaccaacaggatttcacc
gtcccagactatcggactcacatgcaagatccacagggtcggagaagaccatctttactg
tctgaattccaccctggaactgaaaggcctccagagagacggcatggttatgaacagcag
tttcactccatcacagcccagcctgagcatgaggctttggaggctaaacgcccacgcatg
gagactgttgctgaggcccaaatgacccgcacccctcccatggctgggggtattgtgctg
cccttaacccatacagtacaggacagtctaagagccactgtggaggtcaaaaaggagtct
cagttcactgtcaaagtggagtccccaggaggacctacactacacatgggtgaagagcag
gacacttctccttccaaactatccaaggaggagctgatccagagtatggaccgtgtggac
agagagattgctaaagtggagcagcagattttcaagttgaagaaaaagcagcaacaactg
gaggaggaagcggcgaagccagtggagccagaaaagccagtgacccctcccccagtggag
cacaagcaccgcagcatagtccagatcatctacgatgagaacaggaaaaaagctgaagag
gcccataaaatactggaaggtcttggtcctaaggttgagctgcccctgtacaatcagcca
tcagacacaaagntgtaccatgataacatcaagaccaaccaagtcatgaggaagaagctg
attttattttttaagaggaggaaccatgctcgtaaacaaagggaacagaagatctgccag
cgctatgaccagctgatggaagcgtgggagaagaaggtggagcgaatggagaacaacccc
agacgcaaagccaaggagagcagaacacgggagtactatgaaaggcaattccctgagatc
cgtaagcagcgagagcagcaggagcgcttccagagggttggacaaagaggaactggtctt
tctgcaacaattgcaagaagcgagcatgagatttctgaaatcatagatggcctttctgag
caggagaacaacgagaaacagatgagacagttgtcagtcatcccgcccatgatgttcgac
tctgagcagaggcgagtgaagtttattaacatgaacggcctgatggatgacccaatgaag
gtgtacaaagcccggcagtttatgaatgtttggaccgaacacgaaaaggagatctttaag
gagaagtttgtgcaacaccccaagaactttggcctgattgcctcgtatctggagagaaag
tgtgttgctgactgtgttctttactactacttgaccaagaagaaccacaactacaagacg
ctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacacgtccctca
caagaagacaaatcagacgacaaaaacgaagaggacaaatctgagaagtccgagaaaaaa
gaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggatactagggacatt
ggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaaaacacg
ccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcaccacacgt
tccatggccaatgaggctgcgtctgtggcggctgaggaagcacctccctctgcccctgag
cctgccctgccagatcctccgcagctcccaaaatctgatccagcgcagaaggccatgaag
gagcctgcaaaaccccagactccaatagcttccatggatgctaataaagctgctgctggt
gaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaagggcta
gttgagcacgggcggaactggacagccattgccaaaatggtgggcaccaaaagcgaggca
cagtgcaagaacttctatttcaactacaagagacgtcacaatctggacaacctgctccag
cagcataagcaggatacaaggcgggcacgtgctgataggtctcaaggtgaaggtctagcc
acagcatcacccgacgatgatgatgaggacaacgctgatgacagtgaaggtggcgacaac
agctctgatacagagagtgccccctcccccactcaggctgactcctcaaagtctggcgac
tccaagaggtcagacagcgctgcaggagatgctcagtgctctgaccaggacaaaggtctg
gctagcaatgggaaggccatggagccctcatacggcaaactctgtgtcaaggaagaaaaa
agcccagagagtgagactggatctctggacgaaaaggccaggatggcctcctatgcaggc
tcagtgcgtccaaaaaccgaacctcaggatgtggacatgaaggctggagaggttcaggtc
aagatggagcctgagatcaaggagagaggagaaaagggagatcatggcgagaggcttggg
gaactccactcagataatgactccagcgccacctgcagtgctgacgaggatgtggaagca
gagcctgaaagacaaagaatgttcgccatggaaaagccttcattgatcaaccctccaggc
tcggtgctggtgtcctcacccaagcaaacccaactcaacatccagcagctgcagcagcgt
gcagctgccatcccaccaatggtgcctggtgcttttggcactagcggcgtgagtatgagt
ggacttacgatgttgcaacaccaaatcaaagcagtgcatgagtcggcgcaccaagaggag
aaacagaggcaggatcagggagacctggagcgcagaccccccttcaacacccgcagcccc
accatactagacagagatggtaagcccttaacctacatgccttatgaaatgaagctggct
ctggaccaggaggcccactctggtcggccaggctctccctacagactctcccccagggag
ctgagcaaggcctcaccccagcttgaccccaacgccccgaatgcctcccgctacagtgtg
ccaccagtactccaccccgccccgaatcagctggtccagagtatgccagatggagtccgt
gtcacgttcagcagacccagtcgacctcccaacattccctctcctcctccactcattcca
accaccaagcccacggacaagccctccttcatccaaggaggctccatctcccagggaact
cctggcacatacttgccgtcccatgctgtctatgggccagaggggactaagagcgctgtg
ggctccatatctctgggtttgcctcggcagcaggatcctaacaagcctggagctgcagtt
ccatccatacaagacggcagaggcaaccctgcaaaaatgggcgagggtctggctttcaga
ggatcaatcactcagggcacaccagcgctgccccaatctagcattgctgctgacctcctg
aaaagcaccatcacaaagcttgccacagaggacctgagcagcccagacaaggccagggga
gaacagcctaaaggtcatgtcatctatgaaggcaagagtggtcacattgtatcctatgac
gctattaagaacaccagggaaaacacccgcagccccagaactggccatgagatgaaacgc
acttacgacatgatggaggtacccatgggcaggggacaccctggcagggaaggagctcca
tttgagggtttgattagcagagccttgcctagagatggtctacatggagattctaaggaa
agaccattgatcactggatccatcatgcaaggaacacctagaaccgctgcagagtcctat
gaagatgcaatgaaatatggaaaacagataaaacgagagagcccaccaatccgctcattc
gaagggggtattggtaagggcaagccgtatgagggagtcaacactatcaaagagatggga
cgctccattcatgaaataccccgacaagatcagtctggccaggggctagaggggtccatg
tctcagattcaccctctcaaccagtctactatcaagcacaatgtcaagtccctaattacc
agtccctctaagcatccccacagcatgccccagctcgaggccatggaacgagccaaatac
gaggagagcaaggcagtacgccacactgtggtcaactccaccacctctgtcctgcgttcc
acacaccaggaggctaacaaatcccagcttagcccgggcatgtatgaggatgccaacgct
cgcaggactcctgtgaactacaccaccaatcccgggtcccgagggtcacccatgctggga
cgtactccagacggtggaatgggctctgcgaaatctgctgcacatgaaagaaagagtgcc
atgacccctacacagcgggacagtgtcccagctaagtctccagtgtcgggtggtgaccct
gtagcctctcacagccccttcgaccctcaccaccggcccgttggtcctggggaagtgtac
cgagcccacctgcctccacatcttgaccccaccatggccttccacagagtgctggatcct
gcattcatgttccccaggcagccgtccccaacaggttaccatcataacacctaccagctg
tacaccatggagaacacacggcagaccatcctcaacgattatatcacttcccagcagatg
catcctgtcatccctcgacctgacatggcccgaggcttgtcaccacgggaacagcctgcc
gctatcccttacgcagccggagctcgagggattattgatctagcccagatgcctccaact
atcctgttgcctcaccctgggggaacaggtactcccactatggaacgcatcgcctacctc
cctggagctcagccccctttccctcatagggctttcaacccaacctccatatcgccaggt
caccaagcccatcttgctgctgcagctgctgccagtgcagagagggaacgggagagggag
cagcaggacaaggagaaagaaaaggaaagagagagggagcagcgggagagggagcgggaa
atgcgagaacgagagcgcgaccgggagcgaaccaatgaatacattcgtggaggtggacca
gagcagccagggcgaccagggagtcgaggttacttgcattccccttctccctcgcttagg
acgcaggaagtagtggttcagcagcggcctagtatcttccagggcaagagtgtcatcacc
tctctaataccccattcaacagcagtgacaacagtggctcagaatagctctcggtacagt
accgcagctgatgctctggctgctctggtggacgctgcagtctctgccccacagatggat
gtggctaaggtgaaggagaacaaacatgaacgggatgacgacatgtcctcatcagctgct
ggtcggcgagcagccagcctctcagagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcaggaggccgaaaggcgatccatgcagtccccttatggtggtatgtctctg
ccagggggtaagccccattcagcttactctgaggtcactggagtcgggggtaaggataag
ggccctcaaacctcaaagtcccgaattgaagaggagcttcggactcgtggaaagacaact
atcacagccgctaacttcattgacgtcatcatcacacgacagatagcctcggataaagac
tcacgagagcgaggctcccagagttctgactcctcgagcagcttgtcatccagtcgatat
gacaacaccggtggaggagccattgaggtgattagtccagctagttccccagtccagccc
caacaggacaaaccagaagaagtgcaacaacaagcagcaactggcatgcgggcctatgac
atgagtcgttaccggccatcaggggagcctccacagcccagtggccagcagcccccctcc
tcccaggctgacagttactcccaggtccccaagactcaccgggttatgactttggcagac
cacatttcgcatatcataacccaggacttcgcccggaatcaggaccctccggtctcctca
gcttcagccacattccagagcgtcctgccatccatgtcctcttcaggtcgagctaagatg
cccagccgctacagtcctgaaaatcaggtccaggcctcacaccaccagagaccctccagc
agagtttccccagagaatgcccctgacaagtccagagccaggcctggtaagtctccagag
cgaggtggcaggcagatggagaactatgaacccatctctccaccacagagctaccaaggc
atggacaaacaggaggctggcgggcctccaccccagaggcgagaggctgacaactcagag
atcaggagtgactctcgatccccggggagtgtcagctatctgccttccttcttcaccaag
ctggaaaacacctcgcctatggtaaaatcaaagaagcaggagatctttcgtaagttgaac
tccaactctagtgtcggtgattctgatattggaaacgcgcaaccaggcacagagattttc
aacttacctgctgtcaccagctccagcagcatcaacaccaggaatcactcctttagtgac
ccagccagtaacctgggcctggaggacatcatccgcaaagctttgatgggcaatttggag
gagagacaggaggagcaccagggaggagtagggtctcagggtctcaacaacacagtcagt
gacggccgccaggaggccaacccgtcacccagtatggggaagcagaagcagggcaaagcc
aacagcaggaaatcaaagtcacctaacctgggtcaggcctacgctgggngggagcgtccc
tcttcagtgtcctccgtccactccgagggagattatcacagacaagcccaagcccaaccc
cagtggagctgggacgaccgaccttcatccacaggatccatgcagttcccttacaacccc
ctgaccatgcgcatgctaagcagcacgccacccacatccatagcttccccagccatacag
agccagcagcagcaacagcagcagcaacaacagcagcagcagcagcagcagcaggcacct
acagctggagccccggtggcccagcagcgtgtgtggcagtctctgctgtcagagcaatac
gagaccctgtcagacagcgacgactga
DBGET
integrated database retrieval system
