Micropterus salmoides (largemouth bass): 119895300
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Entry
119895300 CDS
T07309
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K04551
ubiquitin B
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119895300 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119895300 (ubb)
04137 Mitophagy - animal
119895300 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119895300 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119895300 (ubb)
Ubiquitin system [BR:
msam04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
119895300 (ubb)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of breast milk
119895300 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
119895300 (ubb)
Exosomal proteins of colorectal cancer cells
119895300 (ubb)
Exosomal proteins of bladder cancer cells
119895300 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
119895300
NCBI-ProteinID:
XP_038564244
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacactcactggcaagaccatcaccctggaggttgagcccagc
gacaccattgagaatgtcaaggctaaaatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctccgactacaat
atccagaaggaatccaccctccatcttgtcctgcgtctgaggggcgggatgcagatcttc
gtcaagaccctcaccggcaagaccatcaccctggaggttgagcccagcgacaccattgag
aatgtcaaggctaaaatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgccgggaagcagctggaagatggccgcaccctctccgactacaatatccagaaggaa
tccaccctccatcttgtcctgcgtctgaggggcgggatgcagatcttcgtcaagaccctc
accggcaagaccatcaccctggaggtcgagcccagcgacaccattgagaatgtcaaggct
aaaatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctccgactacaatatccagaaggaatccaccctccat
cttgtcctgcgtctgaggggcggtcaataa
DBGET
integrated database retrieval system