Micropterus salmoides (largemouth bass): 119895348
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Entry
119895348 CDS
T07309
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119895348 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119895348 (taf6)
03036 Chromosome and associated proteins [BR:
msam03036
]
119895348 (taf6)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119895348 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
119895348 (taf6)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119895348 (taf6)
STAGA complex
119895348 (taf6)
TFTC complex
119895348 (taf6)
SAGA complex
119895348 (taf6)
SLIK complex
119895348 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
119895348
NCBI-ProteinID:
XP_038564334
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MAEERRQKQCSVVLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKVESTEPLKVAKPGQEEEGTIQG
KGQGATAADGKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRADKKETRNY
IEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEK
YLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTF
TKSWLDDKTQWTTRYGCIAGLAELGPDVIKTLILPRLSVEGARIKAVMEGPVVSNIDKIG
ADHVQSLLLKHCASVIAKIRPQPDNVDQYRTDYGYLGPMLCSHVIKARTQAALQAQQVNR
TTLTITQPRPTLTVSQSGLSGSAGPRTPSIIKVPSALTLMSPRPGTPSQPSPPATKYIVM
ATSAGAASTQQVITLSSSQSASPVTSTVPSATSTLQPLVKLESGSGPGLTSSRPLQKYIV
VSLPSSASSSLETKSSVLTTSISSTPLEAGMKLDRSESPGASTQSPH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgtcggcagaagcagtgttcggtcgtcctgcccactgagtccatgaag
gccatggcagagtctgtgggagtggggcagttacaggaggaaagctgcgtagccctgagt
gaagaagtcagctacagaataaaagaaattgcacaggatgctctcaaattcatgcatcat
gggaagagacgtaaattaaccaccagtgacatagataatgctctcaaactaaaaaatgtg
gagcccctgtatgggttccagtcacaagagtttatcccatttcgctttgcaagtggtggt
ggaagagagcttcatttctatgaggaaaaggaagtcgacctcagtgacattatcaataca
ccgctccccagagttccactagatgtgtctctcaaagcccactggttaagtattgagggg
gtgcagcctgctattcctgaaaatccaccgccagcaccaaaagagcaacaaaaggttgaa
tctacagagcccctgaaagtcgcaaaacctggtcaggaggaggaaggtacaattcaaggc
aagggtcaaggggcaacggctgctgatggaaaaggaaaggagaagggtctaatacggttg
aagccacgcagtactcatgagctgtctgtggaacagcagctgtactacaaggaaatcaca
gaagcatgtgttggctcctgtgaagctaagagagctgacaagaaagaaacaagaaattac
atagaagctttacagagtatagctacagaccctggactgtatcagatgcttccaagattc
agcacatttatttctgaaggagttcgtgtaaacgtggtgcaaaacaacttggctctactg
atttatctgatgcggatggtcaaagctctaatggacaaccccaccctgtatttggaaaaa
tacctgcatgagctcatcccagctgtggtgacgtgtattgtgagtaagcagctgtgtttg
cgaccagatgttgacaaccactgggctttacgagactttgctgctcgcctcatggcccaa
agttgtaaaaccttcagtactacgaccaacaacatccagtcccgtattaccaagactttt
actaagagttggttggatgacaaaacccaatggacgactcgttacggctgcatcgctgga
cttgctgaactaggacctgatgtgatcaagacgttgatccttcctcggctttctgtagag
ggtgctcgcatcaaagcagtgatggaaggaccagtggtctccaatattgataagatcgga
gctgaccatgttcagagcctcttactgaaacactgtgcaagtgttattgccaagatacga
cctcagcctgacaacgtggatcagtatcggacagactatggttacctcggacccatgctt
tgctcccatgtaattaaggccaggactcaagcagcgctgcaagctcaacaagtcaacaga
accacattaacaatcacccagcctcgtcccacccttacagtctcacaaagtgggttaagt
gggtcggcagggccccgtactcccagcatcattaaggtcccaagcgccctcaccctgatg
tcccctcgaccagggaccccatcgcagccatctcccccggcaacaaagtacatcgtaatg
gcaaccagtgcaggagctgcctccactcagcaggttatcaccctcagctcttcccagtcc
gcttcaccagtcactagcactgttcccagcgccacttcgaccttgcagcctttggtaaaa
ctggagtctggcagtggccctggactcacaagttcacgacctctgcagaagtacatagtg
gtatctctgccctcatctgcctcttcctctctggagactaagagctctgtgctaacaacc
tcaatttcctcaaccccactagaagcagggatgaagctagaccggtctgagtctcctgga
gcgagcacacagtcgccacactga
DBGET
integrated database retrieval system
