Micropterus salmoides (largemouth bass): 119895404
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Entry
119895404 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119895404
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
119895404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
119895404
NCBI-ProteinID:
XP_038564443
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MPQALSLLPFLLVLMGYAFAGLNIWPSFHVALSNASVFVDFSTKSNSSNVRNTSLSLVNT
ETNTTLLNRTLPNNQSTGRVEFNCSCFLYAGTFRFLLRQTIISAVSHANGTDESSTESTT
WWWSSELQVQWPTFHVAVEKAGNRSGSFQVGIATNEHFQACSSGIDSSLFLEVSYMEYNQ
IGRNSIDKIRARTRHPIKPLRSQSVELACAFPFTERDFIRVALRSPHAAQDVKSSGPLYL
SRIFSYKLLVENANAYRSGCEGTMTVKLITPPCAHINGKVLLYKEAGNGRVVTVSSGMGA
SGTALMGFGPEEPSSPPLAFNWLTQGENETEFNCSVFDPGRNKYCFRFVFNFSRSPSPAQ
TCLVVHRSAESWGPWLPWSVCSVSCGDGVRERVRECLLPSGVEGXQCAGMVKEQSLCSLE
DCAVMPAPSPSLPPVSLGVPPLGGNIVVVAGISLCLAVILATVVVTVWRKLCHTPPCSSV
HRGSMHSPGGRKLSDEASICGHSLQRPSLSDAHGPQGGMVVAVAQTDTPFLGSQPFSQTL
VIPVSQDPERLSPTGQKLLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVQDTLVE
TSASPTNSPIPTPTGFAHSALPLCLQDGANHNHFCIAAPFSEPPSQTSSVTPDRLEEVLG
PLISSHASGGSSKWRDRTADWVEMVERSALAGLRRGGGDAGIVNSFHKNPNFRRTSSFND
TKPQPPPSAQSRQFRERSMTQVGSRTLPEGSCWNKGGRERQPYRSYPIPEHEVSEWVKYR
PQRNDQRKPWIETPVPSHSSELKHTGTNTNSISASEKHAKADLNSTGQRSVETGGGGGIS
GIGGPAAGPASLSVDRAERAEQNWNRRGPSPIQRNMLARKLKEAQSCSGVKGRQRSSTFS
VSSLEQRKGLCRSLPMSGDYSSSGGSPYRLSEAEQRMLDVDLSSNVGEI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctctctcacttctgcccttcctgttggtgctcatgggatatgcttttgca
gggctcaatatctggccttccttccatgttgcccttagcaacgccagtgtatttgtggac
ttcagcacaaaatccaacagcagcaacgtccgcaacacgagcctctctctggtcaacacg
gaaaccaataccaccctcctgaacaggacgctccccaataaccaatcgaccggtagggtg
gagttcaactgctcttgcttcctgtatgcaggaactttccggttcctgctgaggcagacc
atcatctctgctgtgtctcatgctaatggcacggacgaaagtagcacggagagcactacc
tggtggtggagttccgaactgcaggtgcagtggcccacttttcacgtcgctgtggagaag
gcaggaaaccgctcaggatcttttcaggttgggatagccactaatgaacacttccaggct
tgctccagcggcattgactcttctctctttctagaagtcagctacatggagtacaaccag
atagggcgaaacagcattgacaagatccgagcccgcacacggcacccaatcaaacccctc
cgttcccagagtgttgagctggcctgcgctttccccttcacagaaagagacttcatacga
gtggctctacgttctcctcatgcagcacaggatgtgaagagctctggacctctttacctg
tcccgtatcttttcctacaagctgttggtggaaaacgccaacgcttacaggagtggttgt
gaagggactatgactgttaaactgataaccccaccttgtgctcacatcaatgggaaagta
ttgctgtataaggaggcaggcaatggaagagtagttactgtttcctctgggatgggagca
agcggaacagccctaatggggtttggaccagaggagccctcttctcctccgttggctttt
aactggctgactcagggagagaatgagacagaattcaactgttctgtgtttgacccagga
aggaacaagtactgctttcgctttgttttcaacttcagtcgctcccctagtcctgcacag
acctgtctagtggttcacaggagtgcagagtcatggggtccatggctgccgtggagtgtg
tgcagtgtgagctgtggagacggggtgagggaacgagtgcgcgagtgtttgctgccctca
ggtgtggagggantgcagtgcgctggcatggtgaaggaacagtccctctgctcactggag
gactgtgctgtgatgcctgcaccttctccatccctcccccctgtatctctcggagttcca
cccctaggtggtaacatagtcgtggtagctggtatttccctttgcctggccgtgattctg
gctactgttgtggtgactgtgtggagaaagctttgccacacccctccgtgcagctctgtc
cacagaggctctatgcattcccctggaggacgcaagctctctgatgaggcctccatttgt
ggccacagcctccagagacccagcctgtccgacgcccatggcccacaggggggcatggtt
gtggctgtagcccagacagacactcctttcctgggcagccagcctttctcacagacactg
gtgatacctgtctcacaggacccagaaaggctgtcccccacaggtcagaagttgttgcca
ccaatatttgggtaccgtttggctcagcagcagttgaaagaaatgaagaaaaaggggtta
aaagaggccacacagttgtaccatgtctcctcaagcccagtccaggataccttggtagag
acgtctgcttcacccaccaactcgcccatccctacaccaactggatttgctcattccgca
ctccctttgtgcctccaggacggtgccaaccacaaccatttttgtattgcagctcccttt
tctgagccgccatcgcagacttctagtgtcaccccagacagactggaggaggtcttaggt
cctcttatctcttctcatgcaagtgggggcagctcaaaatggcgtgaccgtacagctgac
tgggtggagatggtagagaggagtgctttagcaggtctcagacgaggagggggagatgca
ggaatagtaaactcctttcataaaaatccaaatttccgccggacctccagttttaatgac
accaaaccgcagcctccaccctctgcacagtccagacagttcagagaaaggagcatgacc
caggtgggatctcggaccctcccggaaggaagctgttggaacaaaggaggaagggagagg
cagccataccgttcttaccccattccagagcatgaggtctcagagtgggttaaatacaga
ccccagagaaatgaccagaggaagccctggatagagacacctgttccttctcatagtagt
gagctcaaacacacaggaaccaacacaaacagcatttcagcttcagagaaacatgctaaa
gcagacctcaatagcactgggcaaaggagtgttgagacaggaggtggagggggaatctca
gggattgggggtccagcagcgggacctgccagcctgagtgtggatcgtgcagagcgggct
gagcagaactggaaccgtcgtggcccatcacctatccagaggaacatgctggcccggaaa
ttaaaggaggctcagtcctgctctggggttaaggggcggcagcgcagctccacctttagt
gtatcgtccttggagcagaggaaaggtctctgccgctctctgccaatgtctggagactac
agcagcagtggtggctcaccctataggctgagtgaggcagagcagaggatgttggacgta
gatctgtcctcaaatgtaggggagatatag
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