Micropterus salmoides (largemouth bass): 119895416
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Entry
119895416 CDS
T07309
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119895416 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119895416 (nfrkb)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
119895416 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
119895416
NCBI-ProteinID:
XP_038564463
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MDALTHMLTDPLDPKEENNEEITEECMLGNCRVNLPEDLLEDPEIFFSVMSESTWSNVLS
DSQRQHLRQFLPQFSDNNVAEQDSTISDLFNNSNFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKQQLYSLQQYYHRLLKQILVSRKELLEFAVQNGLDFPPKRKLPTRTHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISLWTPAPQSPSSPTPTVSLRVLPSLSTQD
MKTTEKTELGEQDLKSMLQNHREKRKRQPDHPDLMTSDIHLGDVLSRTNIGRKGAVPLFD
LSLPKKKIKDERRKKKIRTIKVESEDPCETVAPSDTPSAPPVNIINSLPDTPSTPLHNIK
EEIVEESQGSPVSIEEIAVSFFSLLETILRAENLASTLMLEEKVQMWQSSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFADESQHWRWIGPTQDTEKDLSAL
CQLWLDSKDLVVKTENEDMLEITSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPATKPKCGSKDGGSKTPGCLEAGQDIGSNPMSPT
PTTPTPNTPGTPKSPLPCAATTPTKTGIPDTIKSSPGVLLVSPPSLPQLGAILPSSQAGP
PTSQPVTSQHTARIVSHLAASSLPQVRVVSAQPGLVSSAGSQQATLVHQASHQIRMPVSV
ATKGISQAVVSVPLRTASSPVHVPTTLSVAMAKLQTGSPGSPANNPASPAVLQGVTSPNI
KQVSITGQLGMKTAGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMAT
LTKSPVATVKLTPDFLGTATAGSKSISATLHVTPTHASPSSASSALSCTGEVQTTKAGPV
ASTLLKAAGDTAIRLMPTLAVTVADQKSRTFSTVTSPDKSGATIRIMPGLGVIPQKQGQT
ITMTTTTGGKPLTASTCATVVTMAASVVGGAKGITVAPGVSGSPLTLGTATATVRQVPAT
VVTTQTGKLPARITVPLSVLNQPLKNKSVVTTPIVKGSLNTNISSLGRNIILTTMPAGTK
LIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVTTAPS
PKCAPDHPPAPQQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccatatgctaacagaccctcttgatccaaaagaagaaaacaatgaa
gaaataacagaggaatgcatgctggggaactgtagagtgaaccttccagaggacctactt
gaggaccccgaaatcttcttctctgtgatgagcgaaagcacctggagtaatgtactgtca
gattcccagaggcagcaccttcgtcagtttttgccacagttttctgacaacaatgttgca
gagcaggacagcaccatcagtgacctattcaacaacagcaactttaactttggaaatccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcctgaagtggtcaagtac
agacaattgtgtgccaagtcccagagaaagcaacagttgtactccctgcagcagtattac
cacaggctgttgaagcagatcctcgtctccagaaaggagctgctggagtttgctgttcaa
aatggtctggactttccaccaaaaagaaagttacctaccaggactcatgctgaaatgcgg
gagccaagggtgagaagaagactgagtcgcatactaaaggaggtcaaaactgagtgtgga
gacagcaacgcttcatctgatgacgacgatatatcattatggactccggcaccacaatca
ccttcctctccgacacccactgtctcgctcagagttcttcccagcctctccacccaagac
atgaagactactgaaaaaacagaactaggggagcaggacttgaaatccatgcttcaaaac
cacagggagaagaggaagcgacaaccagaccatccagacttgatgacatctgatatccac
cttggagacgtactttcaagaacaaatattggtcggaagggggctgtgccactgtttgat
ctttctttgcctaagaagaagataaaagatgagagaaggaagaagaagataaggacaata
aaagttgaatctgaggatccctgtgaaactgttgcaccttcagacaccccatcagctcca
ccagtgaacatcatcaactccctgccagacacgccatctactccactacacaacatcaag
gaggaaattgtggaggagtctcagggtagcccagtttccattgaggaaatagctgtcagt
ttcttcagcctattggagaccatcttaagggcagaaaaccttgccagtactttaatgttg
gaggagaaagttcaaatgtggcagtcctctccagcaagctccctcaacgtgtggttttca
tctgtcccgtgttggtctgacttggttcttcaagcgctgcagtttcttgcaggagagact
aaagatggcatgatggcactccccagtggcttttctccgtttgtggaatttgctgatgaa
tctcagcattggaggtggattggcccgactcaggatacagagaaggatctcagtgcactt
tgtcagctgtggctggactccaaagatttagttgtcaagacagaaaatgaagacatgtta
gagattacttctcccacaccaagagtttcaactgattatgtggtgcggcccagcactgga
gatgagagacaagtgtttcaaatccaggagcagcagcgatacaaccagccacataaagcc
ttcaccttcaggatgcacggctttgaatccgtggtggggcctgttaaaggggtgtttgat
aaggagatgtctctcaacaaagccagagagcacacgctgctccgctcagaccgaccgcca
tacgtcaccattctctctctggtgcgggatgcagcagccaggttacccaatggagaagga
acacgggcagagatctgtgaactgttgaaagactcgcagtttcttgctccagatgtcact
agtgcacaggtgaacacagttgtaagcggggctctagacagacttcactatgagaaagac
ccttgtgtgaagtacgacattggccgcaaactctggatttatctgcaccgcagtcgcagt
caggaggagtttgagaggatccaccaggctcaagctgcagctgcaaaagcaagaaaagcc
ctgcagcagaaacctaaacctgcaaccaagcctaaatgtggaagtaaagacggaggcagt
aaaacacctggatgtctggaggcaggacaggatataggctccaatccaatgtcaccaact
ccgacaacacccacccccaacacacctggaactcctaagtcacccttaccctgcgcagcc
accacgccaacgaagactggaatcccggatacaatcaaaagcagcccaggggttcttctt
gtgtcccccccctcgttgccacagctgggagccatcttacccagcagtcaggctggtcca
ccaacttcacagccagtcacgtcccaacacacggctcggatagtgagtcacctggcggca
agctcccttcctcaggtacgggttgtttctgctcagcctggtctggtctcttcggcagga
agtcagcaggccacactggtacatcaggcctctcaccagatcaggatgcctgtttcggtg
gcaactaagggcatttcacaggctgtagtttctgtgcctctgaggactgctagtagtcca
gtccatgtgccgacaaccctgtctgtagctatggccaaacttcaaactggatcacctggt
agcccggccaacaaccccgcttcacccgctgtgctgcaaggagtcacgagcccgaatatc
aaacaggtgtccatcacaggccagttgggaatgaagactgcaggaggagcaggtattcca
ataacggctacaaacctgcgcatccagggtaaagacgtcctgcgtcttccaccatcctcc
atcaccacagacgctaaaggccagacggtgctgcggatcaccccagacatgatggcaact
ctcaccaaatccccagttgcaaccgtcaaactcacccctgacttcctgggcactgccacc
gcaggcagcaagagcatatcagctactctccatgtgacgccgacccacgcttcaccttcc
tccgcctccagtgctctatcctgtacaggggaagtacagaccactaaagcaggccctgtt
gcctccaccttgttgaaggctgcaggagacacagccatacgtctgatgcccacactggct
gtcaccgtggctgaccaaaaatcgaggaccttctccaccgtgacttcccctgacaagagc
ggcgccactattcgaataatgccaggtcttggtgttattccacagaaacagggtcaaacc
attacaatgacaactaccactggcggcaaaccactcacagcgtctacatgtgctactgta
gtgaccatggctgccagtgttgtgggtggtgctaaggggatcactgtggctcctggagtc
tcgggttcacctctgacgctaggaacagctacagccactgtgcggcaggtccccgctaca
gtggttactacacaaacagggaagttacctgcacggataactgtgcccctctctgtcctc
aaccaaccactgaaaaacaagagtgttgtgaccacaccaattgtgaaaggaagtcttaac
acaaatatcagcagtctgggcaggaacatcatcctgaccaccatgccagccggcacgaag
ttgatcgcagggaacaaaccggtcagctttgtcacagcacagcagttccagcagcttcag
cagcaaggacaggccacacaggttcgtatccagacagtacaggctcagcagctccagcag
cacatggcaacaggctccccaaaatctgtctccacagttgtagtcacaaccgcaccttcg
cccaaatgtgcccccgatcatccgcctgcacctcaacagtga
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