Micropterus salmoides (largemouth bass): 119895424
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Entry
119895424 CDS
T07309
Name
(RefSeq) cilia- and flagella-associated protein 54-like isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119895424
Cilium and associated proteins [BR:
msam03037
]
Motile cilia and associated proteins
Sperm associated proteins
119895424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
fn3
PMD
Motif
Other DBs
NCBI-GeneID:
119895424
NCBI-ProteinID:
XP_038564476
LinkDB
All DBs
Position
Unknown
AA seq
2580 aa
AA seq
DB search
MDLPASYYGRLDKRNPVISAFERDVNSFITLMRRFASQSSQDNNVSYAKGIKILVEIWKK
YKHRLPSKLYQERMLQIADFLFGIKLYQLALWHGYSLHLLQFNSVKITDITDVDHFMACF
FPEGFDTDQDIFTMKIRAMQGCALCIFEQVKRHSVLSQKGLSKLLHVLNFIRIMMQAFQQ
HEHLCWQIYNGSLHIYTICRYLMTMNCSAQALEYLLWASISLEISIPLMTVNYLPWIVTL
YCAVCHCYYDNQAAVQAEEFARRALGKINELAKMEEQNEVPTTRETQRAFKEASIKLAAM
MFKRVVFEARRRPKNMLRIKSRSTLKDIPNAPWPRTTTERMLMGLFDSSAAQFLGILEAL
WDSTRRPLKTRMPDDPELQEVILELLSAGVSILSGLATTSEPLSALTPTSTLMDVAITGE
NKVPIMSAMRFIKLLFQYKQPDAFTELAREMLRVLSGVEGQSFRRAELELALLDSFNSLL
SSQRSRPRENMIDERHKSSFSMSDEFINLVDTLHKSVCSSTPELQPDVDLVLDVLLFLWC
KVKVVMQRDQLQNLEFTQYLEKLDNYDMWLWCLSMLCEVAFACDLAAVDCILMAEMIHTV
AILLESAAERSNQTHCPAAGEAGSDGVKPSALFLLGSSSTELLQKVCEVVERGLEALSKG
VALLLPKDCSAITDSAFMQKFSLLPPSTPSLSSPTSSEVGNEEDEISMTEKEELESKTES
DIKGSTRVYLLATDLHLELDIIHHRASLKLLQLNAVTESKLLDRIKKNKVSKALFLIQKA
LLVYNSMEPNNSNKIKSLLEEASTLIEKAGVEERKLYISTIPKTLVQNQEKGIKEEEENP
PPPPILLSRTDHSFTFAPAPYTLEGQVCWYQLCGRAAEGINRKVRLGDCSLPGTGNMVPA
LSGECMLRVEGLVPNQKYVFAVAAYNSQGKLLGNTTGVTTFPLLASMPVPLLSTWVHLAQ
VAYQTEQYAIAKRACRELWSHYTYPDTGSHITQDRLATTGLRVQTLQHSSPHLCQLFLTS
IFVETEINILQGSLYCGSFSDSGPFIWEQEARLAECERMLVAMDLALWLNDDSAAVQAVV
SCYSLLAPVIFHQITCTPVVQVLKKCLIVLEENSGLLKKKWTGNTSGSFMHMIACITYYL
SKALRVLREHQMASVVMDCGRRLLQEVYDAQLQISRLANETSKTDHAAIKGEMKASFQLK
ALHWKDKKIITPEAALTADNVEISRPLTGCEDPTILYELISKSTLKDAYRDVMKHRRKEY
FIEFAALLLQRTMEEGHPDLVLKWGQCTFEFLSRRDEVMGLSTKCLEGNSQSKRRSIGQA
PKGNEPLQNKNAASHDDTRKKLKQKKPHSMLQRVRTNRDMQAVENLLTLMSSMVQRHKKQ
SQLRKMCCEERVWKSHLNYSLAQAHLALLYQDLDQLHGGTLQHRYSQLDPLCISLAYSGV
LLRRNSQQQQSSEYKIVSKRDFPHSRLRDYVAAHKDRSEKEAVRVDDSVTEESCEEGEDS
SQTVEPEIKMHRRTDVLLLDSLNKAALHLQRAMVLAHRGSHWTTLLCVCQTVWEQSCRIS
ILVQRAAQLEPPSPITADQLHTTFTPLLVLAADLIMDMLNRLGLWSLYDSDLTEEELESS
LHFSAPLDDSTQVDLRFVRTLVLHTLERLHDSGKWESLAHFALVFNSYTRERYALIVTPL
LVHAQRRLLERVSYFGGPAVPQPHHVKTQKATGKQVTYRSYAGSQLLSGWTPYPAQQPHI
RRKTALTNSTPGDVVDLKGAEIQQSMSLVCVPLDVEDTLSCYRQALERRPYSLQVFQHSR
SLLQLLLAYTQPCFAAQLQPCQSRNLSHCASRVDFSPIVMPNPNIQPCDLTEEDYSNPNA
LYSLPVSPDHMPTVTAAYSTSIKYLQANGHDSLRVLALHEMGNLQFYNENTRAAHSYWST
AVDCALQSSGTLDKWDGVSFGGGSLQQTLKQAGIWGCLQAAELTAKIAQYILTSDITQRT
NCCLLSAHLFKCVLCCSPGQPQADLQYAFHSIGDELLPGVDLFSEPHRVHLGTIVTCLNF
ICHWLFTTGYHITLLPILALYLHIVGTRCRDLQRAVEGKILKVRALTELCLFTEAVKESV
QLTQGKGVLLPYGHFIAKDSLQPVKTFYSNKSLLDNAEALEELVNCDFAPEVCTLYGSTL
CLRINLARVQLVLALSNTVHSPPVPDFVEGEACVSITSCSVKSKHHEQDALGTEGSNVKK
EEPKVLTLNTENLTPERIKFLLLEVASSLLHLQRLTSLSCSEMENLELAIEINLLKANLY
LQQGHAALSSEMAVSSLMLLQTSPVIMRGSIYDSQKLVSEPHAKTGSEQGTKGCSVSNPL
HGDCPRAVEASERIEVSLWLHCRLALVRSLAAHVPGAAALFPGKNINEELARMLQEGLDE
CALWGDVDIQALLMVECAKLEAQRGKTDDSMAMIQEAVSLLSQRTCMPPRSSVTLAQATL
LLSDLRGVQSTTLLKLTQKLLKQQLCVYGESVVFDDGKLCFSPPGPSNIYLPYLSVLDQI
TLRIAGHILDPSTMEMPASAQPSQSASRQHSSQSERDSQAPVPSLSNPRTSSPTSTPLAR
NT seq
7743 nt
NT seq
+upstream
nt +downstream
nt
atggacttaccggcttcatattacggcagacttgataaaagaaacccagttatttcagcc
tttgaacgggacgttaactcgtttataacactgatgagacgattcgcttctcagtcgagc
caagacaacaacgtgtcttatgctaaagggattaaaatcctcgtggagatatggaagaag
tacaaacatcgactgccttcgaagttgtaccaggagcgcatgctgcagattgcagatttt
ctatttgggataaagttgtaccaactggctctttggcatggctacagtctccacctcctg
cagttcaattcagtgaaaataactgacatcacagatgtggaccacttcatggcttgcttc
ttccctgaaggttttgatacagaccaagatatctttaccatgaagatccgtgcaatgcag
ggctgtgccttgtgtatatttgagcaggtgaaaaggcacagtgtcctcagccagaaggga
ctctctaaactgctgcatgttttgaacttcatcaggatcatgatgcaggcttttcagcaa
catgagcacctctgctggcagatatataatggttcgttacacatctacaccatctgccgt
tacctgatgaccatgaattgtagtgcgcaggctctggagtaccttctatgggcaagcatt
agtttagagatctccatccctctgatgactgttaactatctgccatggatcgtcacactc
tactgtgccgtctgccactgttactatgacaaccaggctgcggtgcaggcggaggaattt
gccaggagagcccttggaaaaatcaatgaactggcaaagatggaggagcagaatgaagtt
cctaccaccagagagactcagagagctttcaaagaagcctctatcaagctggctgccatg
atgttcaagcgtgtagtgtttgaggccagaaggaggcccaaaaacatgctcagaatcaaa
agcagaagcaccctgaaggacatacccaatgcaccatggcctcgtactacaacagagcgc
atgctaatgggcctgtttgacagcagcgcagcacaattcttgggaatcttggaagcacta
tgggatagcaccagacggccactgaagacaaggatgccagatgacccagagctgcaggag
gtgatccttgaactcctgtctgctggcgtcagtatattatcaggactcgcaactactagt
gagcctctgagtgcactgacaccaacatccactctaatggatgtagccattacaggagaa
aacaaagtacccatcatgtctgcgatgaggttcattaagctgttgtttcagtacaagcag
ccagatgcatttactgaacttgccagagagatgctgcgggttttgtctggtgtggaaggt
cagtcattcaggagggcagagctggagcttgctttacttgacagtttcaatagtctgctg
tcttcccagaggagccgtcctagagagaacatgattgatgaaagacacaaatcttcattc
tcaatgagtgatgagttcatcaaccttgtggacaccctgcacaagtctgtttgcagctct
actcctgagttgcagccagatgtggacctggttttggatgttttgttatttctgtggtgt
aaagtgaaggtggtgatgcagagggatcagctgcaaaacctagagtttacacagtacctc
gagaagctagataattatgacatgtggctgtggtgtctgtctatgctgtgtgaagtggcc
tttgcctgtgacctggcagctgttgactgcatactgatggcagagatgatccacacagta
gccatactgctagagagtgcagctgaacgcagtaatcaaacacattgtccagctgctggt
gaagcaggcagtgatggtgtgaagccaagtgctttatttcttcttgggagttcaagtaca
gagctgcttcagaaggtgtgtgaggtggtggagaggggtcttgaagctctgtcaaagggt
gtagccctgctgctgcccaaagattgctcagcaatcactgactctgccttcatgcagaaa
tttagtctcctccctccatcgactccctccctatcttctccgacatcatcagaagtggga
aatgaagaagatgaaataagtatgacagaaaaagaagaattggaatctaagacagaatca
gatattaaaggttccacacgtgtgtaccttcttgccaccgaccttcatctcgagctagac
atcatccaccacagggcatccctcaagttactgcagttaaatgcagtcacagagtcgaaa
ctgttggatcggatcaaaaagaacaaggtgtccaaggcccttttcctgatccagaaagcc
ttgctggtgtacaacagcatggagccaaataacagcaacaaaatcaagagtctgctagag
gaggcctccaccctgatagagaaagcaggcgtggaagagagaaaactgtatatctccact
atcccaaagactcttgtccaaaatcaagagaaagggattaaggaggaagaagaaaaccct
ccacctcctccaattctactctcacgcactgaccactcatttacctttgccccggcacct
tataccttggagggacaagtgtgctggtaccagctctgtggccgtgcagctgagggcatt
aaccgaaaagtccgccttggagactgcagcctgccaggaactggaaatatggtaccagca
ctctctggtgagtgcatgctgagggtggaggggctggtgcccaaccagaaatatgtgttt
gctgttgcagcctacaatagccagggcaagctactgggcaacaccacaggggtgacaaca
ttcccactgctagcatcaatgccagtaccactgctctcgacgtgggttcacttggctcag
gtggcatatcaaacagagcagtatgccatagcaaagagagcctgcagggaactgtggagc
cactatacgtatcccgacactgggtcccacatcacacaggatagactcgctaccacaggg
ctgcgtgtccagaccctgcaacactcatctcctcacctctgtcagttgttcctcacttct
atatttgttgagacagagataaacattcttcaaggatcgctctactgtggctcttttagt
gacagtggaccttttatctgggaacaggaagccagactagcggagtgtgagcgaatgctg
gtggccatggacctggcgctgtggttgaatgatgatagtgctgctgtgcaagctgttgta
agctgttatagtctcttggcccctgtaatcttccatcagatcacttgcacccctgtggta
caggtgctaaagaaatgcttgatagttctggaggagaattcaggtcttctcaaaaaaaaa
tggactggaaacacttcagggtcatttatgcacatgattgcctgcatcacctactacctg
tcgaaggcattacgtgtgctcagggagcatcagatggcatctgtggtgatggactgtggt
cgcaggctgctccaagaagtctatgatgcccagctgcagatcagcagacttgccaatgaa
acttctaagacagatcatgctgcaatcaagggtgaaatgaaggcaagttttcagttgaag
gcactgcactggaaggacaagaaaattatcacacctgaagcagctctcacagcagacaat
gtagagatttcacgcccgctgactggctgtgaagatcccaccatattatatgagctgatc
tccaaaagcacattaaaggatgcctatcgtgatgtgatgaagcacagacgcaaggaatat
tttattgagtttgcagcactacttctccagagaaccatggaagaaggccacccagacctt
gtgttaaagtgggggcaatgcacatttgaatttctttccagacgtgacgaggtgatggga
ctgtccacaaaatgtcttgagggaaacagtcagagtaaaagaagaagtattggtcaggct
ccaaaaggaaatgaaccactccagaacaagaatgcagcttctcacgatgatacaagaaag
aaactaaagcagaaaaagccacacagcatgcttcagagagtgagaactaacagggatatg
caggctgtggagaacctgctaaccttaatgtcatctatggtgcaacgccacaagaagcag
tctcagctgaggaaaatgtgctgtgaggagagggtgtggaagtctcaccttaactacagc
ttggctcaagcccatttagcactcctttaccaggacctagaccagctgcatggaggaacc
ctgcagcacaggtacagccaattagatcccttgtgtatctctctggcctactctggtgtc
ctattgcggaggaactcacagcaacagcagtcttctgaatataagattgtctcaaagaga
gacttccctcactcccgtcttagggattacgtggctgcacacaaagacaggagcgaaaag
gaggcagtcagagttgatgactctgtcacagaggagagttgtgaggagggagaggactcc
tctcaaactgtggaaccagaaataaagatgcatagacgtactgatgtcttgctgcttgac
tcacttaataaagctgctttacatctccaaagggccatggtgttggcccatcgtggaagc
cactggaccactctgctctgtgtgtgtcagactgtgtgggagcaaagctgcagaatctct
atcctagtacagagagctgctcagcttgaacctccctctcccatcacagcagaccagctg
cacaccaccttcaccccgctactggtgctggctgccgacctaatcatggacatgctgaac
agactaggactgtggagtttgtatgacagcgacttgactgaggaggagcttgaatccagt
ctccacttctcagccccactagatgacagcactcaggtggacctgcgtttcgtccgcacc
ttggtgttgcacactctggagcgtctccatgacagtggcaaatgggaaagcctagctcac
tttgccttagttttcaactcatacacacgggaacgttatgccttgatcgtaactcctcta
ctagtccatgctcagaggaggctgcttgaaagggttagttattttggaggacctgcagtt
ccacaaccacaccatgtcaagacacagaaggccactggcaagcaggtaacttacaggagc
tatgcaggctcccagctgctcagtgggtggacgccttaccctgcacagcaaccacacatt
cgtagaaaaacagcactcacaaactccactcctggagacgtagttgatcttaaaggtgcg
gaaatacagcaatccatgtcccttgtgtgcgttcctctggatgtagaagacacactgagc
tgttaccgtcaagctcttgagagaagaccatattctcttcaggtcttccagcatagtcgc
tcattgctgcagctgcttctggcatacacacagccctgctttgcagcacagttacaaccc
tgtcagagcagaaatctcagccactgcgcaagccgggttgatttcagtcccatcgttatg
cccaatccaaacatccaaccttgcgacctgacagaggaggactacagtaatccaaatgct
ctttacagcctccctgtcagtcctgaccacatgccaactgtcacagctgcgtactccacc
tccattaagtatcttcaggccaacggtcatgactccctcagagttctggcactgcatgaa
atgggaaacctacagttctacaatgaaaacacacgggcagcacactcgtactggagtaca
gctgtagattgtgccttacagagctcaggcactttagacaaatgggatggcgtgtccttt
gggggtggctccctgcaacaaactctgaaacaggctggcatttggggatgtctacaggct
gcagagctcactgctaagattgcacaatatatcttaacttctgatatcacccagcggacc
aattgctgtctcctgtctgctcatctctttaagtgtgtgctgtgttgctcccctggtcag
ccccaggccgacctccagtacgcctttcacagcatcggagatgaactgctccctggagtc
gaccttttctctgaaccccacagggttcaccttggcaccattgtaacctgccttaacttt
atctgccactggcttttcaccacaggctaccacatcacgctactgcccatactagccctt
tacctacatattgtgggaaccaggtgcagagatttgcaacgcgctgttgagggcaaaata
cttaaggtacgtgcccttactgaactgtgtctgttcactgaagctgtaaaggaatctgtt
cagctcacacagggaaaaggggtccttctgccttatggacacttcatcgccaaagacagt
cttcaacctgtgaagacattctacagcaacaagtctctcctggacaatgcagaggctttg
gaagaacttgtgaactgtgactttgctccagaggtctgcacgctgtatggatcaacattg
tgcctccgaatcaaccttgctcgtgttcaactagtccttgcactcagtaacactgtacat
agccctcctgtgccagattttgttgaaggagaagcttgtgtcagcataacaagttgttca
gtgaaatcaaaacaccatgaacaggacgcactaggcactgagggctccaatgtaaagaag
gaagaaccaaaagtgctgactcttaatacagagaatcttactccagaaagaattaagttc
cttttgttagaagtagcctcctccttgttgcacttgcagcggctcacgtctctgtcctgt
agcgaaatggagaacctggaactggcaattgagatcaatcttttaaaggccaacctatac
ctgcagcaaggacatgctgcacttagttctgagatggcagtttcatctttgatgctgctg
cagacgtctcctgtaatcatgagaggatccatatatgactctcagaaacttgtgtctgag
ccacatgccaagactggaagtgaacagggtactaaaggttgcagtgtgtcaaaccccctg
catggagactgtcccagagcagttgaggccagtgagagaattgaagtttctctgtggcta
cattgccgcctggctctggtccgcagcctggctgcacacgtccctggcgctgctgccctt
ttcccaggtaagaacattaatgaggagttagctcggatgttacaggagggtcttgatgaa
tgtgcgctatggggagacgtcgatattcaagcccttttaatggtcgaatgtgcgaaattg
gaagcacaacgaggcaagactgatgacagcatggcaatgattcaggaagctgtgagcctg
ctgtcacagcgaacatgcatgcctccaaggtccagtgtgactctggctcaggccactttg
ttgctcagtgacctgagaggagtgcagagcaccacacttttgaaattgacacagaaatta
ctgaaacaacagctgtgtgtttatggtgagagtgtagtgtttgatgatggaaaactatgt
ttctctcctcctggacccagcaacatctacctcccgtacctcagtgtactggatcagatc
actttgcgaattgcaggtcacatcctggatcccagcaccatggaaatgccagcctctgcc
cagccatcacaatctgcttccaggcagcattccagccagagtgagagagactctcaagca
ccagttccatctctgagcaacccaagaacctccagtcctacaagcacccccttagccaga
taa
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integrated database retrieval system
