Micropterus salmoides (largemouth bass): 119895503
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Entry
119895503 CDS
T07309
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
msam04148
Efferocytosis
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119895503 (vps11)
04148 Efferocytosis
119895503 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119895503 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119895503 (vps11)
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119895503 (vps11)
Hops complex
119895503 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
ADIP
Beta-prop_EML_2
zf-ANAPC11
ToxA_N
TSGP1
zf-RING-like
Kbp-5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
119895503
NCBI-ProteinID:
XP_038564592
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNFVLPSGISACDSGRGHIVLGDMEGKVWLLTRSL
QFTFFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTNLFVATLEKVHCYTLSIKEYPKVELDTHGCALHCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDAKSPNKTEFGSRESSSSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFILQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
SYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PDGTTRLLKGLCTNYQPSRDTAEKDSLDRGWVNKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSPQGVYDTLLELRLQDWAHEQDPERKKVLQGEAVSLLRSDHTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSCNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagaaaatttgtcttctttgataaagatacggtgaaggac
cctgtggataatgggaaaaattttgttctgccgagcggaatttcggcttgtgactccggc
cgaggtcatattgttctgggagatatggaaggcaaggtctggcttttgacacgctcccta
cagtttacattctttcaggcctacaagttgcgggtaacacacctctaccagctgaagcag
cacagcatccttgtatcagtggggcaggatgaacagggaataaaccctctagtaaaggtg
tggaaccttgacaagagagacagtggaaatcctctctgcactaggatttttcccgcaatt
cctggcaacaaaccaactgaagtgtcttgcctcggtgtacatgagaacctcaacttcatg
gccattggcttcacagatggcagtgtagttttgaccaaaggtgacatcaccagagatcgt
cacagtaaaactctgactctgcacgagggaaccagcccagtcacaggcctcgctttccgc
caagtggcaaaagtcacaaatctgtttgttgccactctggaaaaagtccattgctacacc
ctatccatcaaagaataccctaaggtagagctggatacacacggctgtgcgttgcactgc
tcctccctggcagatccctcccaggattcccagttcattgtggctggggatgaatgcgtg
tacctgtatcagcctgatgaacgagggccatgctttgccttcgatggacacaagctgttg
gcccactggcaccgcggatatctgtttctacttatcagggatgcaaagtcacccaacaag
acagagtttggtagcagggaaagttcttcatcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcttttgatgatgtcatcgatgtggtggcg
gagtggggctccttctacatcttgaccagagatggaaaaatgtttattcttcaggagaaa
gacacgcagaccaaactggagatgctgtttaaaaagaacctgtttgtgatggcaataaac
ttggccaagagccagcatctggacagtgatggactgtcagagatcttcagacaatacggc
gatcacctttaccttaagggagaccatgacggtgccatccagcagtacattcgtaccatt
gggaaactggagccatcgtatgtcatcaggaagttcctggatgcacagaggatccacaac
ctgacagcatatctacaagccctccacaggcagtcactggctaatgcagaccacaccaca
ctgctgctaaactgttacaccaagctgaaggacagctccaagctggaggagtttattaag
agcagtgaaagtgaggtccactttgacgttgagatcgccatcaaggttctgcggcaggcc
agctaccacagccacgctgttttcttggctgaaaaacacatgcaccatgaatggtacctg
aagatccagctggaagacctcaagaattatcaggaaggcctgcgttacattggacgtctg
cctttcgaacaagctgagagcaacatgaagcgttacggcaagacactgatgcaccatgtt
cctgacggtaccacacggctcctgaagggcttatgtaccaactaccaacccagcagagac
accgctgaaaaagatagcctggacaggggttgggtcaacaaggccaactctgaggaattt
atcccaatttttgccaacaaccctcgggagctgaaagccttcctggagcacatgatcgag
gtggacccccgttctccccagggtgtgtatgacacactgctggagctccggctgcaagac
tgggctcacgaacaggacccagagagaaaaaaggtcttgcagggggaagctgtgtcgctg
ttgaggagtgaccacactgtgtttgataaggctttggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggcaaactgtaccagcagataatgcactac
cacatgcagaatgaggagtatggaaaagtggtagaagcctgcaagcgctatggggaccaa
gagggttgcctttgggagcaggcgctgggatactttgccagaaaagaagaggactgcaag
gcgtacatcagtgaggtcctacatcacattgaccaaaacaacctgatgcctccactactt
gtggtgcagacactggcacacaactcgacagccactctctccgtcatcaaggactacctc
atcaataagctgcagagggagagtcagcagatagaggacgatgaacgcaaaatacgccag
taccgtgaagaaactgctcacctccgctccgagatccaggagctcaaaacgagtgccaag
atattccagaagaccaaatgtaacatgtgcaacagccctttggagctgccgtctgttcat
ttcctgtgcagccactccttccaccaacactgcttcgaaagctacgccgagagtgaggct
gagtgcccaacttgcactccagagaaccgcaaagtcatggacatgctgcgtgctcaggac
cagaaacgcgacctgcatgaccacttcaacagacagttacgcagctgtaatgatggtttc
tctgtcgtggctgactattttggtcgaggggtgtttaacaaactgactctggtcaccgac
cctcctggcagcaaaactgttggaagtctggaagtcaatctgcaaagagaccttctcatc
cacaccaagagaaactgctag
DBGET
integrated database retrieval system
