KEGG   Micropterus salmoides (largemouth bass): 119895542
Entry
119895542         CDS       T07309                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam00565  Ether lipid metabolism
msam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:msam00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    119895542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119895542
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119895542
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119895542
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119895542
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_Vps41 Beta-prop_EML Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Nup120_160 LisH LisH_PAC1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd eIF2A Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Pox_A_type_inc Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd ARMC9_LisH SutA-RBD LisH_2 DUF2570 LisH_WDR26
Other DBs
NCBI-GeneID: 119895542
NCBI-ProteinID: XP_038564645
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEEGDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVTASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGILVHPGGRFIVSCADDK
TIRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaaagacagagagatgaactaaaccgggctatagccgactatctccgt
tccaatggatacgaggaggcctattccaccttcaagaaagaggcagagttagatatgaat
gaagagggagataaaaagtatgcggggctgttggaaaagaagtggacctcagtcatcaga
ttacagaagaaggtgatggagttggagtcaaagttgaatgaggcgaaggaggagatgaca
catggaggacctgtgggtcaaaagagagaccccaaggagtggatcccccgtcccccggag
cgatacgccttgagtgggcaccgcgctccggtcactcgtgtcatattccaccccgtcttc
tccgtcatggtcactgcctccgaggacgctaccattaaggtgtgggactacgaggcaggg
gactttgagcgaaccctaaagggccacacagactccgtgcaggacatctcctttgaccag
acaggaaaactgctggcttcatgttcagctgacatgagcatcaaactttgggacttccag
gggtttgagtgcatccgaacaatgcatggtcacgatcacaacgtgtcgtctgtagccatc
atgccaaatggggaccacatagtgtctgcctccagagacaaaaccatcaagatgtgggaa
gtggccactgggtactgtgtgaagacatttacaggccacagggagtgggtgaggatggtg
cgccccaaccaggatggatcgttgatcgccagctgctccaacgaccagacggtgcgtgtc
tgggtgaccgcctccaaggagtgtaaagctgagttgcgggagcatgaacacgtggtagag
tgtatcgcctgggcccctgacagtgctcaccccaccatcctggaggccacaggctccgag
agcaagaagagtggaaaacctggccccttccttctctctggatccagagataaaacaatt
aagatgtgggatgtcagcattggcatctgccttatgactctggtgggacatgacaactgg
gtgcgtgggatattggttcatcctggaggacgattcatagtgagctgtgctgacgacaaa
accattaggatctgggactacaagaacaaacgctgcatgaagaccctgtgtgcccatgaa
cactttgttacctcactggatttccacaagactgctccctatgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga

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