Micropterus salmoides (largemouth bass): 119895613
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Entry
119895613 CDS
T07309
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119895613 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119895613 (nup98)
03036 Chromosome and associated proteins [BR:
msam03036
]
119895613 (nup98)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119895613 (nup98)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119895613 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
119895613
NCBI-ProteinID:
XP_038564768
LinkDB
All DBs
Position
Unknown
AA seq
1864 aa
AA seq
DB search
MFNKSFVTPFGGGTGGFGTSSTFGQQTASPHMNSVTAAAGFGTTGGFGTSAFGTTSNAGG
LFGSTQNKPGLFGSSTFSQPATPSTNTGFGFGAASGTSTSLFGSTATGTTGGLFSQQNNA
FGANKPTSFGKVSLPPCPPGFGTSTSSGGLFGATNTTSNPFGGTTSLFGGSGFSAAQQPG
TTVKFNPPTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPM
AAGTGSLFGPATATSSTTTGLFGSAAPNNTSFSFGQNKSTFGPAAAAGSFGTTAGGLFGQ
QTQQQAANSLFKPFGQATTTQSTGFSFGNTNTMGQANTSSMGLFGNTAAAQPAGGLFGGS
QTSAATGFGTATGLFGQTNTGFGNAATQQSLFGSKSAGFGTTTTSAPSFGTGTGLFGNKP
TLTLGTGTNTSTFGFGANPAAGSLFGNKPATGGLGTGLGTSFGAAVGTGQPSLFGNNQNK
LGTLGAMGTFGATGFNSGTSSLGFGVPQQPVALTDPSAAAAQQAMMQQQLSGLAYSPYGD
SPLFRNQLLDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKSQL
FDGLDDDEPSLTNGAFIPRKSIKKLVLKNLNSSQYSSPISKETDDLASPSEYPQNGHSHV
EEEDSREVPGPSGQADDDPEVTQFYVNPIAKPIPQGRTQTSLQDTISDLNMHKPARNGLE
LSSEDMSGSVGEESLQEERGEEQQESQQSPHPAGIVLNRVGYYTIPSMEDLAEMVDENGE
CVVENFTVGRKGYGSIFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRA
EVTLDGVWPNDKTTCTQIRSPERLTEMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAH
FSKYGLQDSDEEDDVPPKTDPKKLKTTMPLPPSRLQQTLPPSQQQVAPQAQSTVVMELPG
GVAELDSDMADITQSFPTESMLGGEEDGDLLGGLMDTAGGKLGGLISAEHDGVSASSHMA
SSLGINPHTLQIMKASLFAEDEEESDMFQDPGATKGPANVSSPRIVVPGAQSRHSVGGLL
QARFTSGFLAQLSDSPRPPLHHPPPLSRASPAAVEPSRPLHWAGPGPSSFLLPHQTPEPS
VRTVGVRRLGGPVPLKESVTQGKGSLLMDAGLFAGRSFRVGWGPGWTLAHCGHRLSSPSA
KRLDHQELITKTDFSFLPKPARSKPLIESPYKVVLEQLVGPEPPAVKASEEEEDEESQAV
LQRPLEICLKHSTVDTTDASACPLVRPQPGVAALHEYAEWITELNRKQGDADPLLASWAE
VWTLCEALWGRLGPADEEPDVEARGEYEQQLERRRTFSAWLARGATGRVEEEAALAGKGR
HTEAVFSYLTGNRISEACRLAQKEGDHRLSLLLSQATGSQYCRDLLALQLADWSRMQTDS
YLPEERLRIFTLLAGKPLWQSSESVVNVCSQLDWKRCVAVHLWYMLPPTASVADALAKYE
AAFQGSCEGGKYACPPLPPYLEEEQPGMDDDEEEEESKRPLHDLCFHLLKLYSDRHYSLQ
QLLDPLTVTWERLDYRLSWHLWGVLQALHYSHLSASRQGLLHASYAAQLESAGLWHMAVF
ILLHIPDHTERERAVREMLTLHCPLQETDESVRRERFLTERLLIPERWIHEAKATRARRD
ADRHQEALHLYRAGYWSQCHRLLIQHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWD
TAGRVYLDYIRVIKTLQDIQQMENAGYELERLYTEVTSLCSRIELLPCSTARDRLAQSEM
AKRVANILRVVLSLQQGDTASDSLSIPLAQLAPHITRLPMPEDYTLEELRGLTQSYLRQL
IVSQ
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttgttactcccttcggcggagggacgggggggtttggcacctca
tcgacctttggacagcaaacggcctctcctcacatgaactctgtgactgcagctgcaggt
tttgggacgacgggaggctttgggacgtctgcgttcgggaccaccagcaacgctggagga
ctttttggttccacacagaataaacctggtctgtttgggtcgagtacattcagccagccg
gccacgccctccaccaacaccggcttcggttttggtgcggcgagcggcacttccaccagc
ctgttcggcagcactgcaacgggcaccaccggcgggctcttctcccagcagaacaatgct
ttcggtgccaacaaacccacctcttttggaaaagtctccctcccaccgtgtcctccaggc
tttgggacgagcaccagcagtggcgggctgttcggggcgaccaacaccacctccaacccg
ttcggcggaacaacctccctgtttggaggctctgggttctccgccgcacagcagccggga
acaaccgtcaaattcaaccctcctacaggaagtgacacaatggtgaaagcaggcgtgacc
acgagcatcaacacgaagcaccagtgcatcacggccatgaaggagtacgagaacaaatcc
ctggaggagttgaggctggaggactaccaggcgggcaggaagggcccgaccaacccgatg
gctgcggggacgggcagtttgtttggaccggccacggccacatccagcaccaccaccggc
ctgttcggctccgctgcccccaacaacaccagcttctccttcggacagaacaagagcacc
tttggacctgcagcggccgccggcagtttcggtacgacggcaggcggcctgttcggccag
cagacccagcagcaagcggccaacagcctcttcaagccgttcggccaggccaccacaacg
cagagcaccggcttctccttcggcaacaccaacactatggggcaggccaacaccagcagc
atgggtttgtttggaaacactgcagcggctcagccggcgggcgggttgttcggcggcagt
cagacgagcgccgccaccggctttgggaccgccaccgggctgttcggccaaaccaacact
ggatttgggaacgccgccacacagcagagtctatttggtagtaagtcggccgggttcggc
accaccaccaccagcgccccgtcctttggcactggcaccgggctgtttggcaacaagccc
accctcacgctggggaccggaaccaacacctccaccttcggttttggtgcaaaccccgct
gcaggaagtctgtttgggaacaagccagccactggaggactggggactggactgggaacc
agcttcggagcagcagtgggcacaggacagccgtctctgtttgggaataaccagaacaaa
ctgggcacactgggagcgatgggaacattcggcgcgactggattcaacagcgggaccagc
agcctgggcttcggggttccgcagcagccagtcgcgctcacagatccgagtgcggcggcc
gctcagcaggccatgatgcagcagcagctcagcggtctggcgtactcgccgtacggagac
tcgccgctgttcagaaaccagctgctggaccccaagaagaaagaggagcgtctgaaacca
accaatccgacggcccagaaggctctgaccactcccacacactacaagctgacccctcga
cctgccaccagagtccgccccaaagcgctgacatcatcaggggcctccaagtcgcagctc
tttgatggcctggatgacgacgagccctctctcaccaacggagccttcatccccagaaag
agcatcaagaaacttgtgctgaagaacctgaacagcagtcagtacagcagtccaatcagc
aaagagacggacgacctcgcctcgccttcagagtatccacagaacggacacagtcacgtg
gaggaggaggactcgagggaggtgccgggccccagcggccaggcagacgacgacccggag
gtcacccagttctacgtcaaccccatcgccaagccgatcccgcaggggcgcacccagacc
agcctgcaggacaccatcagcgacctcaacatgcacaagccggcccggaacggactggag
ctgagcagcgaggacatgtcggggtctgtgggggaggagtctctgcaggaggagagaggg
gaggagcagcaggagtcccagcagtctcctcacccagcaggcatcgttctgaaccgtgtg
ggttattacaccatcccttccatggaggatctggccgagatggtggatgaaaacggagag
tgcgtggtggagaacttcactgtcggcaggaaaggctacggctccatcttcttccccggc
gaggtgaacgtgacgggactgaacttggacgagatcgtccacttcagacgcaaagaggtc
atcgtgtacccggacgacaaaaacaagccgccagagggggaggggcttaacaggcgagcc
gaagtgactctggacggcgtttggccgaacgacaagacgacctgcactcagatcaggagc
cccgagcgcctgactgagatgaactacgaggggcggctggagaaagcctcgcgcaaacag
ggagcccgtttcctggagtacagacctgagaccggatcctgggtgttcgaggtggcccat
ttctccaaatatggcctccaggactctgacgaggaggacgacgtcccgcccaaaaccgac
cccaagaagctgaagacgacgatgccgcttcctccctccaggctgcagcagacgctccct
ccctcccagcagcaggtggcgccacaggctcagtccactgttgtcatggagctcccgggc
ggcgtggcggagctggacagcgacatggccgacatcacccagagcttcccgacagagagc
atgctgggaggagaggaggacggcgacctgctggggggcctgatggacacggccggcggg
aagctcggaggtttgatctccgcagagcacgacggcgtctcggcgtccagccacatggcg
tcctctctgggcatcaaccctcacaccctgcagatcatgaaggcgtctctgtttgctgag
gacgaggaggagagcgacatgttccaggacccgggagcgacgaaggggcccgctaacgtc
tcgtcccctcgcatcgtggtgccgggagctcagagccgacactccgttgggggcctcctt
caggctcgctttacctccggcttcctcgctcagctgtcagattctccccgccctcctctt
catcatcctcctcctctgtcccgggcgtctccagcagccgtcgaaccctctcggccctta
cactgggcggggccgggcccctcgtccttcctgctgccgcaccaaactccagagccttcc
gtcaggacggtcggcgtccgacggctgggcggccccgtccccctcaaagagtcggtcact
caggggaaggggagtctgttgatggacgccggcctgtttgcgggtcgttcgtttcgggtg
gggtggggtcccggctggacgctggcgcactgcggccaccggctgagctcgccgtcggcc
aaacggctggaccaccaagaactgatcaccaaaacagacttcagcttcctgccaaaacct
gccaggagcaaaccgctgatcgaaagcccctataaggtggtgttggagcagctggtgggt
ccggagcctccagcagtgaaggccagtgaggaggaggaggatgaggagagccaggcggtg
ctgcagcgccccctggagatctgtctgaagcacagcacagtcgacaccacagacgcctcc
gcctgccctctggtccgcccgcagcccggcgtggcggcgctgcacgagtacgccgagtgg
atcacggagctgaaccgcaagcagggagacgcggaccccctcctggcttcctgggccgag
gtctggaccctgtgtgaggccttgtggggccgtctgggccccgcggacgaagagccagac
gtcgaggcgcgcggcgagtatgagcagcagctggagaggaggcggaccttctcggcctgg
ctggcccgcggagccaccggcagggtggaggaggaggcggcgctggcggggaagggtcgc
cacacggaggccgtcttcagctacctgacgggcaaccgcatcagtgaggcgtgtcgcctc
gcgcagaaggaaggagaccaccggctgtccctgctgctgtctcaggccacgggctctcag
tactgccgggacctgctggcccttcagctggccgactggagccgcatgcagaccgacagc
tacctgcctgaggaacgactgcgcatcttcacgctgctcgccgggaaaccgctgtggcag
tcgtctgagtcggtggtgaacgtgtgctctcagttggactggaagcgctgcgtggccgtc
cacctctggtacatgctgcctccgaccgcctccgtggccgacgccctcgccaaatatgaa
gccgccttccagggctcgtgtgagggggggaagtacgcctgccctcccctgcctccgtac
ctggaggaggagcagccgggaatggatgatgatgaggaggaggaggagtcaaagcggccg
ctgcacgacctctgcttccacctgctcaagctctacagcgacagacactacagcctgcag
cagctgttggaccctctgactgtcacctgggagcgtctggattaccgtctgagctggcac
ctgtggggcgtcctgcaggcgctgcactacagccacctgagcgcctcgcggcagggactc
ctccacgccagctacgccgcacagctggagagcgccggcctctggcacatggccgtcttc
atcctgctgcacatccccgaccacactgagcgggagcgagcggtgcgggagatgctgacc
ctgcactgccccctgcaggagacggacgagtcggtccggagggagcgcttcctgacagag
aggctgctgatcccggagcggtggatccacgaggccaaggccacccgagcccgccgcgac
gccgacagacaccaggaagccctgcacctgtaccgtgccgggtactggagccaatgtcac
cggctgctgatccaacatctggcctcagattgcatcatcaacgacaaccacgactacctg
ctggagttcctggaggggctggcggtccctgaacacagcgccaccatccaggactgggac
actgcagggagggtttacctggactacatcagggtcataaagaccctgcaggacatccag
cagatggagaatgccggctacgagctggagcgtctgtacaccgaggtgacgtctctgtgc
agcagaattgagctcctgccgtgcagtaccgccagagaccggctcgcccaatcagaaatg
gcgaagcgtgtggccaacatcctgcgtgtggtgctgagcctgcaacagggcgacacggcg
tccgactccctcagcatcccgctcgcccagctggcgccgcacattacccgcctgccaatg
ccagaggactacacactggaggagctgcgaggactcacgcagtcgtacttgcggcagctc
atcgtaagccaatga
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integrated database retrieval system
