Micropterus salmoides (largemouth bass): 119895660
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Entry
119895660 CDS
T07309
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119895660
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119895660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
119895660
NCBI-ProteinID:
XP_038564842
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPELLSAIREGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDGMDALLHGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPLPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLRAFGLSRELRKLSQKEPEFKPQYL
GLEQLCQDFAVELLGMCRNQSEVATILNSCGDESQEAIEEQAFEEGIPNLSRLRLAVNYN
QKEFVAHPICQQVLSSIWCGNLAGWRGSKTAWKLFVSVGIFLTMPLLCLVYWLAPKSKVG
KMLKIPVIKFLLHSASYMWFLITLLGESITMELYRDKYASRQQNILHSSFHMVWVVGFFW
YECKEVWIDGLRSYLLDWWNCLDMVVLSMYLASFALRVLIMLKGYFLCLDPDGTEECVYF
TQTVREDWHQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPYLGRFNETFNFLFWTMFGMANQGYVDMPEFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKSVFYILRGIFRRICCCTCISKENYPAITSMTSVKGSEDSQVPYRQQVIRAL
VQRYIESARREFEETKRKDIGNRITELSKAVSRMHIDMKMMQQLRVDDGHSASDALTKDC
SSILGKYIIGAKNNFRGFDTRPDDKITALKLTVHNGEEGVDNEKVDLDTHKKKESDVRQN
QGGEGGAEGSQQVTDCDFVKMEEGRAKAELGDKTCESDNKEQVETDKNEYTDTEVKEEGV
EGTSFNNIEETVKAKATQGEAEKSMEGEILTGAKVGGKRTETTPEQAESLKVSNENADTK
RMVNKFKDIELQEKQVEARWMKGRKSEDNVAEKPCVKASNEKPGGKKMIPSPTGSSSSQD
TGFGSREGEGSIDGMLVRP
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctcacgccagaacaatggcgcgagattatgaacaagaagatgaggttccct
cccgagctcctcagtgccattcgggaagggaaaatagagctactgtgtggactgttgaag
accggtgatggcatcatccgccaactggatgagtctgaggatcgccagtggagggaggcc
ctcaacctgtccatccgcctgggaaatgaggacggcatggacgccctcctgcacggggtc
aagtttgacttccggcagattcacgaggccctgctggtcgccgtagacaccaaccagccc
agagtggtgaagcgtctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctccttttctcaggccatctttgaccactctattgacaactcgcagtttgcccctggt
gtgactcctttgaccttagcctgccagaaagacctgtatgatatagtcaccatgcttacc
caaaaaggtcacgtcatcccattgccacataagatatcctgtgcctgtctggagtgtcgt
aacggcaggcagtacgacctgctgaagttctccttgtctcgtatcaacacctaccgtggc
atcgccagccgtgcctacctgtccatcacctctgaggatgccatgctcagagcttttggt
ctcagcagagagctccgcaagctctcacaaaaagagccagagttcaagcctcagtacctg
ggcctggagcagctttgtcaggatttcgccgttgagttgctgggcatgtgtcgcaaccag
agcgaggtggccaccatcctgaacagctgtggagacgagagtcaggaagccatagaggag
caggcctttgaggagggaatacccaacctgtcacgtctgaggctagctgtcaactacaac
cagaaggagtttgtagcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aacctcgcaggctggagaggcagcaagacggcctggaagctgtttgtctctgtggggatc
tttctcaccatgcccctcctctgtctcgtctactggctcgcacccaagtcaaaggtagga
aagatgctaaagattcctgtgatcaagtttctcctccactcagcctcctacatgtggttt
ctcatcacgttacttggagaatcaataacaatggagctgtaccgagacaaatatgcctcc
cggcagcagaacatcctgcacagctccttccacatggtgtgggtagttgggttcttctgg
tatgagtgtaaggaggtgtggatcgatgggctgcggagttacttgttggactggtggaac
tgcttggacatggtggtgctcagcatgtacctggcatcctttgcgttacgtgtgcttatc
atgctcaaaggttacttcctctgccttgatcctgatggcacagaggagtgtgtctacttc
actcagactgtgcgtgaggactggcatcaggaggacccccagttgatttcagaggtgctg
tttgcagtaaccagcatgttgagcttcacgcggctggcgtacatcctgccagcccatgaa
tctctgggaactctgcagatctccatagggaagatgattgatgatatgatgagatttatg
tttatattgatgatcattggaacagcattcctctgtggcatcaacaatgtctatgttcct
tatgtcatctctccatatcttggcaggtttaatgagacgttcaacttcttattctggacc
atgtttggcatggccaaccagggctacgtggacatgccggagtttgtgttggcagagttt
gtaggaaggattctgtacggcatcttcacgctcgtcatcgtcatcgtcctgctcaacatg
cttattgctatgatcactaactcctttcagaaaattgaggatgatgcggatgttgagtgg
aaatttgccagatcaaagctgtacctcagttacttcagagagggcctaaccatgcctgtg
cccttcaacatcatcccctcacccaaatctgtcttttacatcttaaggggtatctttaga
cgaatctgctgctgcacttgtatatctaaggaaaactatcccgctataacctctatgacc
agtgttaagggatctgaagacagccaggtaccttaccggcagcaggtgatcagagctctg
gttcaacgctacattgagtcagctcgcagggagtttgaggagacaaagaggaaagatatt
ggtaaccggatcactgagctgagcaaagcagtcagcaggatgcacattgatatgaaaatg
atgcaacagcttcgggtggatgatggacactctgcaagcgacgcattgaccaaggattgc
tcctccatactggggaaatacatcattggtgctaagaacaatttcagaggttttgacacc
agaccagatgacaaaattacagcactcaaattgacagtgcacaatggagaggaaggggtg
gataacgagaaggttgacttagatacacacaaaaaaaaggagtcagacgtacgacagaat
caggggggcgaaggtggagcagagggatcacagcaggtaacagactgtgattttgtgaaa
atggaggagggcagagctaaagcagagctgggggataagacgtgtgaaagtgataacaaa
gagcaggtggaaacagacaaaaatgaatatactgacactgaagtgaaagaggagggggtg
gaagggacaagttttaacaatatagaagaaacagtaaaagccaaggccacacagggtgag
gcagaaaaaagtatggaaggagagatactgactggagcgaaggtgggtggaaaacgcaca
gagacgacccctgaacaagctgaaagcctcaaagtcagtaatgaaaacgccgacacaaag
agaatggtaaacaagttcaaagacatagagctgcaagaaaaacaagtggaggcaagatgg
atgaagggtagaaagtctgaggataatgtagcagagaagccttgtgtcaaggcgagcaat
gaaaaacctggaggcaagaaaatgattccctcgccaacaggcagcagcagctcccaggac
acgggctttggttcccgagaaggggagggatcgattgatgggatgctagtgaggccgtaa
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