Micropterus salmoides (largemouth bass): 119895810
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Entry
119895810 CDS
T07309
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119895810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119895810
03036 Chromosome and associated proteins [BR:
msam03036
]
119895810
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119895810
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119895810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119895810
NCBI-ProteinID:
XP_038565073
LinkDB
All DBs
Position
Unknown
AA seq
1915 aa
AA seq
DB search
MSAAMLSTTTSKLNVLVNKLHEYLAHSAVEDSNGTPASEDAHDLVVTGLTNRSCSVRNST
GHAAAEVGVDNKYSRRKPSVVTKHSGLDESGDSNSSEDLDLPVNANGHLDVTRLPKGTVL
VRPEPVDNARDDFRGPEFRSRKSGVLRKEFSRRRGGVEHTGIVSCTACGRQVNHFQRDSF
YRHPVLKVLICKSCYKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILR
NLGRKELSGILESKWYCYVCSPEPLFDLVMACDSVLENMETLWHQQRRRNRVEPEKSELY
TMLPHLPQNIPLDKWDHTGMDGNVVFNYNTLQVSKDITKKAKHLVDSTNILNRTFVNFIH
SVTTNKRTPAVRNLYLNSFLSVVKGLRRSLAALEDSLKEEFSDLDVLSCWEKFLNEDFDL
QPVTEADTELDISNERCLSDLQKLAAEHLEDEDSDSKGFTDGTSVHDCRGGDVRSDSHEA
RQRAQKIGLKPSESGINMIKKLVVKLTPVPMEQEPPSDAPKMEEDIHMKDEKSEESDASE
DEETGVVANNKLSNDNSSASLHLEEEHGNRRSPRLKTTPLRRPSDVKAKTSLSAADSDSD
SDPEETPSTVAAKNTEEKSLSRARDDSDSDEVPAALLERAAISQSSDEPQSDEDGGKAST
KVAKKCLFWLTKSTPMSPEKMRRKRKMLDRSPESDRRGKSRGGSGTDSSSDDQNSQKKIQ
HMNALRSIGKPHLVKRQDEGVARKQSMLQAGKSKTKSRQEAVESASSSSEDDHDDGSGSD
GSDQKMKPITEEVALLGAAAFHQSSGDEEQSGPMWAAEEDDDPENRIAKKMLLAQIKANY
SSGDDISSEEDTQEDDSESEGDREEKQGNENNGTDEKGEDLASESSGSTSNGPSSRHHLL
RHKLTLDEGTSGDKAVAESEAGRQESKQRAGSKHVSSDSESDGDCNESELEEGGMSEELS
QSEEESTQDILKSSTKVKEAPRSYEKKKQVPCIWLSDSSSEKSDKEDADEEMSASKGTPK
GRKKIRKIIEDVNLRAETQEALREEEERCKRLADREQQMEDRREIIVIPDEQSQVQCPIT
TKLVLDQDEETKEPLVQVHRNLVTKLKPHQVDGVQFIWDSCCESVKKANSSPGSGCILAH
CMGLGKTLQVVTFLHTVLLSENLKFRTALVVCPLNTILNWVNEFKKWQDSMRKDKVQVTE
LATIKQSERFRALQRWQRDGGVMIMGYEMYRILSLARKISDEEQKKELKSILVDPGPDFV
VCDEGHILRNDASNISKAMNAIKTRRRVVLTGTPLQNNLEEYHCMVNFIKKNLLGSLGEF
RNRFINPIQNGQCADSTPKDVRIMKKRAHVLYAMLAGCVQRRDYSELTQFLPSKHEYVLA
VRISPLQYQLYRYYLDHFTGVGSMPNRAKTRTGANLFKDFQVLGRIWTHPWCLQLNYISK
ENKGHFEKKKQVKAAALLRNEETIVVESGLRENEGNNDDGRAAGIVDVSNGAPAVEGETA
TISSRPQSQDEGWFRNLLSEKDAKILEHSGKMVLLFEILRMAEDLNEKVLVFSQSLITLD
LIEDFLVASHQARDPSLFKVGSWIKNIDYYRLDGSTSATLRKKWADLFNNTDNFRGRLFL
ISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIYRVYRFGQFKQVFVYRFLAQGTMEEK
IYDRQVTKQSLSYRVVDQQQIERHFTLFELTELYTFEPDLLDDPNSKKSRRTTSVLPKDT
VLAQLLQTCKDQIVSFHEHESLLDHKQEEELSEAERKAAWAEYEAESNTANLPVSSTQDT
LDMKTNEQLLELLNRSRGNVSVAFLSLQRMRSHTSEDYLLRVRQQYPQLPEAEVKIKAEI
WRLCDEREQERRRAFYRDVLAQQQSLTLSIQAILNTRRNQGMQMTVTAVNTPGQT
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctgagcaccactaccagcaagcttaatgtattggtcaacaaactg
cacgagtacttggctcattctgctgttgaagacagcaatggcacaccagcctcagaggat
gctcatgatcttgtggtcacaggtctgacaaacagaagctgttctgtgagaaactcaaca
ggtcatgctgctgcagaggtaggagtggataacaaatactcaaggagaaaaccttctgtt
gtcacaaaacactcaggactggatgaatctggtgactcaaattcgagtgaggatttggat
ttaccagtcaatgcaaatggtcaccttgatgtcactagattgccaaaaggcactgtacta
gtgaggccggaacctgttgataatgcaagagatgattttaggggaccggagtttcgcagc
cggaaatcaggcgttctgcggaaagagttttcaaggagacgtggaggagttgaacacacg
ggaattgtcagttgcactgcatgtggccggcaagttaatcacttccagagagattctttc
tatcgacatccagttttgaaagtacttatttgcaagtcctgctacaagtattactcaagt
gatgacatcagtaaggatggagatggaatggatgagcaatgcagatggtgcgctgaaggg
ggcaacttgatctgttgtgacttctgtagtaatgccttctgcaagaagtgtattctaaga
aatttgggaaggaaggagctgtctggcatcttggagagcaaatggtactgctatgtgtgt
agcccagagcccctttttgacctggtgatggcctgtgacagtgtcctagagaacatggag
actctgtggcatcagcagcgcaggaggaacagagtagagccggagaaatctgaactttac
accatgttgccacacttgccacaaaacattcctttggataaatgggatcacactggtatg
gatggtaatgtggtgttcaactataacacactgcaggtatccaaggatattaccaaaaag
gccaaacatttagtggactctacaaacatcttaaaccgaacatttgtcaatttcattcat
tctgtgaccacaaacaaacgaacacctgctgttcgcaatctgtatctgaactcctttttg
tccgtcgtcaaaggcttgcgaaggtcacttgcagctctcgaggatagcttaaaggaagaa
ttcagtgacttggatgtcttgagctgttgggagaagttccttaatgaagactttgatctg
cagcctgtgaccgaagcagacacagagctggatatctctaatgaaagatgcttgagtgac
ttgcagaaattggcagctgaacatttggaagatgaagattctgactccaagggcttcaca
gatgggacaagtgtacatgactgccgcgggggagacgtgcgttcagattcacatgaagcc
agacagagggcacaaaagattggtctgaagccttctgaaagtgggatcaacatgattaaa
aaactagtggtaaagcttacacctgtgcctatggagcaggagccgccctctgatgcccca
aagatggaggaggacatccacatgaaggatgagaagtcagaggaaagcgatgcatcagaa
gatgaagagactggtgttgtagctaacaacaagctgagtaatgacaactctagtgcgtct
ctacacttagaggaggaacacggcaatagacgatctcctcgcctgaagacgacgcctttg
cgtcgaccaagtgatgtcaaggccaaaacgtctctttcagcagcagacagtgacagtgac
tctgatcctgaggagactcccagcacagtagctgccaaaaacactgaagagaaaagtctc
agcagagcaagagacgactccgactcagatgaagtccctgcagctctgcttgagcgagcg
gctatatcacaaagctccgatgaaccacagagtgatgaggatggtggaaaagcgtcaact
aaggtggccaagaaatgtctcttttggctcactaagagcaccccgatgtcaccggagaag
atgcgccgcaaacgcaagatgctggaccgttcccctgagtctgacagaagaggaaaatct
cgagggggaagtgggacagattcctctagtgacgatcaaaactcgcagaagaaaattcaa
cacatgaatgcgctgaggtcaatagggaagcctcacctcgtcaaaagacaggatgaaggt
gtggctagaaagcagagtatgctacaggctgggaagtcaaagactaaatctcgtcaggaa
gcagtagagtcggcatcctcatcaagcgaagatgaccacgatgatggctctgggagtgac
ggaagtgatcagaagatgaagccaatcactgaagaggtggccttactgggggcagcagca
ttccaccaatcatcaggcgatgaggaacaatctgggcccatgtgggcagcagaagaagat
gatgatccagaaaatagaatcgctaagaaaatgctattggcccaaatcaaagccaactac
tcctcgggcgacgatatctcttcagaggaggacacgcaggaggatgactctgagtcggag
ggtgacagggaggaaaaacaaggcaatgagaataatggaacagatgaaaagggggaagac
ttggcttcagaatcatctggctccacgtctaatgggcccagctcaaggcaccatcttctc
cgccacaaactaaccttagacgagggaacatcaggtgacaaggccgtggcagagagtgaa
gcaggaaggcaggagagcaagcaaagagccggaagcaaacacgtgagctctgatagtgaa
agtgatggtgactgtaacgagtcagagctggaagaaggtgggatgagcgaggagctgagt
cagtcagaggaggagtccactcaagacatactcaaaagctccactaaagtgaaggaggca
ccccgtagttacgaaaagaagaaacaagtgccctgcatttggctatctgactccagcagt
gagaagagcgataaagaggatgcagacgaggagatgagtgccagtaaaggcacccccaaa
ggacgcaaaaagatccgcaaaatcattgaagatgtgaatctccgtgctgagacccaggaa
gccctcagggaggaggaggagaggtgcaaacggttggcagatagggaacaacagatggag
gacaggagagagattattgtgataccggatgagcagtctcaagttcagtgtccaatcacc
accaagctggtcctggatcaggacgaggagaccaaggagcctctcgttcaggtgcacagg
aacctggtgacaaagctgaagcctcaccaggtggacggtgttcagtttatctgggacagt
tgttgtgagtctgtgaaaaaggccaactcttctcctggatcaggctgtatactggcacac
tgcatgggcctgggaaagactctgcaggtggtaactttcctccacacggtgctgctatca
gagaacctgaaattcagaacagccctcgtcgtgtgtccacttaatactatcctcaactgg
gtcaacgagttcaagaaatggcaagacagcatgagaaaagataaagttcaagttacagaa
ctggcgacaataaagcaatcagaacgattcagagctctgcagaggtggcagagagatgga
ggtgttatgataatggggtatgagatgtaccgcatcctgtcgctagcccggaaaatcagt
gatgaggagcagaagaaagagctgaagagcattctggtggatccaggtccagactttgtg
gtttgtgacgaagggcacatcctgcgcaatgacgcatccaatatctccaaagctatgaat
gccatcaagacccgaagaagagtggtgctaactggcacaccactacaaaacaacctggaa
gagtatcactgcatggtcaatttcatcaagaagaatcttctgggctcactgggcgagttt
cgaaaccgttttatcaacccgatacagaacggccagtgtgctgactccacaccaaaagac
gtccggataatgaagaagcgagcgcatgtactttatgcaatgttggctggttgtgtgcag
aggagagattactcagagctgactcagtttctgccttccaaacatgagtatgtgctggca
gtgaggatttccccacttcagtatcagctgtaccgctactaccttgaccatttcactggt
gttggttccatgcccaacagagcaaagacgaggactggagcaaacctgttcaaggacttt
caggtgctcggccgaatttggactcatccctggtgccttcagctcaactacatcagcaag
gagaacaagggacattttgaaaagaagaaacaagttaaagcggcagctctgctgagaaat
gaagaaaccattgtggttgagagtggtctgagagagaacgaagggaataacgatgacggc
agggcagcgggcattgttgatgtgtccaacggcgctccagcagtagaaggagagacggca
accatcagctcaaggcctcagagtcaagatgagggctggttcaggaatctgctgtcagaa
aaagacgctaaaatcctggagcactcagggaagatggtgctcttatttgagatcctcaga
atggctgaagacctgaacgagaaagtgcttgtgttcagtcagtccttgatcacattagac
ctcattgaggacttccttgtggcttctcaccaagccagagacccatcattattcaaagtg
ggcagctggattaaaaacattgattactatcggcttgatggttccaccagtgctacgtta
aggaagaaatgggcagatctgttcaataatactgacaattttcgcggcagattgtttctc
atctcaacgagagcaggctcacttggcatcaacctcgtcgctgccaacagggtcattatt
tttgacgcctcatggaatccctcatatgacgtacagagcatatacagggtgtaccgcttt
ggtcagttcaaacaagtgttcgtgtaccgcttcttggctcagggcaccatggaggagaag
atctatgatcgtcaggtgaccaagcagtctttgtcctatcgagtggtagatcagcaacag
attgagaggcacttcaccctttttgaactgactgaactttacacatttgagccagacctg
ctggacgacccaaactctaagaaaagcagaagaaccacctcggttttgccgaaggataca
gtcctggcacagctgttacaaacatgtaaagaccagatagtgtctttccacgagcatgaa
tcgctgctggaccataaacaagaagaggagctcagtgaggcagaacgcaaagctgcctgg
gccgagtacgaggccgagtcaaacacggccaacctaccagttagctcaacccaggacacc
ttggatatgaagaccaatgaacagctactggaattgcttaacaggagcagaggaaatgtg
tctgtggccttcctgtcgctgcagaggatgaggtctcacactagcgaggactacttgctg
cgagtgcggcagcagtatcctcagctgcctgaggctgaggttaagatcaaagctgagatt
tggagactgtgtgatgagagggagcaggaacgtagacgggccttttatcgagacgttctt
gctcagcaacaatcactcacactcagcatccaggccatactgaacactcgaagaaatcaa
gggatgcagatgaccgtgacggctgtgaacacgcccggacaaacttga
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integrated database retrieval system
