Micropterus salmoides (largemouth bass): 119895875
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Entry
119895875 CDS
T07309
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04270
Vascular smooth muscle contraction
msam04625
C-type lectin receptor signaling pathway
msam04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119895875
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119895875
09153 Circulatory system
04270 Vascular smooth muscle contraction
119895875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119895875
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119895875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
DUF3719
Pept_S41_N_bact
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119895875
NCBI-ProteinID:
XP_038565194
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MSGTQSTLTDRTPSILNKDPTDKKPKNEKSSVSLKHEFDPTGLVQRCVIIQRDENGFGLT
VSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTDSNHTEVVKLIKSGSYVALTVL
GRPPGLPQIPLEEGEEEEREEGAEVSPLSSLSVPHSPALPGGEQCRPQEHTTSSPSDGGE
NKTMHNQKADIPQKMLIKEQQDLQAKEEEYSRNPRPKLLKEIQEAKKHISLLQEQLSKAA
LQDGAKGCRDGEAEEGGREPSLKEQTPSSWGDSGTDGPSTNNNSMHSSPLSESPGKRETP
CQSPDIIRRDGLNFCPSPDTGDTPDTDSSAQCSMGSPPYLLNPQIIGAEDDYFDSQQEQI
NGQCSCFQSVDLLKSRPAHLAVFLHHVVSQFDPAPLLCYLYADMHKQTSSKESRRFFLDF
HSLFMDRTANLKVPVPEAISAELEKRRLELIPEELCKQYTQVLQDTLLPDLHKNLDDFRQ
KRSMGLTLAENELSKLDLERGKDQQALEKECSCAEHILSKIEDILLTSHPTEEEKCQTMQ
YVIHTYMKHLGVKAKEPRGLEHKRARINFLPKIKKSIKPEKEGEEKVKKPRFPNILGPPR
RLSRVDSTSVGKAVEINKQRSPKQPSQPAIGIPEQSDSSSNSGRIRGNQLSEGSDNGTQF
FPSTTSPTHSSSTGQASDTSGQDSDSNASPFCIQPRLGESLQSGDHQDGVFSPTSTPFDF
SPSNLEQLQEEDQEPFRMEVQCPVSSADIQSEDDQGGEMEFEEDPVNWQSLVSRGVLASL
TQQEIKRQEVINELFYTERAHLRMLKVLDCVFNQRLSRDAILPPEDIKHIFINLEEIIQL
HVSITEQMTAIRKRSETSVIGQIADDLLAWFSGEEEEKIKRAVGTFCSNQPSALELIKTR
QKKDQRFTLFMQEAESNRLCRRLQLKDIIPVEMQRVTKYPLLLDNIAKYTEDGEEREKVK
KAGECCKKILNHVNQAVKEAENKQRLEEYQRRLDLSSLKQSENPMILELKNLDLTKRKMV
HEGPLSWKVNKDKAIELYTILLEDILVLLQKQDERLVLKFHGKNLASAADTKQIFSPIIK
LNTVLVRPVATDNRSFFVLSMSENGAQIYELMAQTVSDQRTWQCLITQCADAMKSQPHNR
DTPAAQSDAERDAIEIIKHGMSKESKEPDRTSSGSIHSSGIQDKDATSSPDIQSPPSMNP
FDDMKSEDEEEELAIADRQEEEEDEEDEEVDEAELEAFLDGQLADRLPFLQEGSRQGIAL
ENQEHNAFVLPSSKGEEALKTLAMLKQALFNHIISREAEEENKQSRAPGCLLSASLPGSP
EGPSAASDESQASASSQKDNPQLLSGRTGLPEPTEHNALLILPGGFVVMDFSGVSEENST
DDDVGVACDVGIDMRKLLSSSSQTEGGGPNLSRQLMTHLRLLQADLQYLKEVEMKYNEMR
QTHSDLATDSDDNQ
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtcaacactcactgacaggaccccaagcattctcaacaaggacccc
acagacaagaaacctaagaatgagaaatcctctgtctccctcaaacatgagtttgaccct
actggtcttgtccagcggtgtgtgataatccagagagatgaaaatggctttgggctgacc
gtaagtggagacaaccctgtgtttgtgcagctggtaaaggaagatggggctgcaatgcga
gcaggtgttcaaacaggagataggatcattaaggttaacgggaccttagttacagattca
aaccacactgaggttgtgaagctcataaaatcgggctcctatgtagccctgacagtgctg
gggaggcctccagggcttcctcagatcccactcgaggagggagaggaggaagagagggag
gaaggggcagaggtcagccctctttcctccctctcagtgccccactcgcctgcactgccc
ggtggggagcaatgcaggccccaggagcacaccacctcatctccgtcagatgggggtgag
aacaaaaccatgcacaaccagaaggccgacatcccacaaaagatgctaatcaaggagcaa
caggacttacaggcaaaggaggaggagtacagcagaaaccctcggcctaaactactgaag
gagatccaggaggccaagaagcacatttccctgctgcaggagcagctcagcaaagcagca
ttacaggatggagcaaaagggtgcagagatggtgaggctgaggaggggggccgtgaacct
tctctaaaggaacagaccccgtcctcatggggtgacagcggtactgacgggccctcgacc
aacaataactctatgcacagcagccccctctcagagagtccaggcaaaagagagacaccg
tgtcaaagcccagacatcatccgccgagacggcctgaacttctgcccatcaccagacact
ggggacactcctgacacagactcaagtgcccagtgtagtatgggtagccctccgtacctc
ctcaacccccagatcatcggagcagaagatgactactttgactcacagcaagagcagatt
aacggacagtgtagctgtttccagagtgtagacttgttgaagtctcggccggctcatctc
gctgtcttcctccatcatgttgtctcgcagtttgacccggcgcctttgctctgttatctc
tacgctgacatgcacaagcaaaccagctccaaagaaagccggcgcttcttcctggatttc
cactcactctttatggatagaacagcaaatcttaaagtaccagtgccagaggccatttca
gctgaattagagaagcggaggttggagttaatcccagaggagctctgcaaacagtatacc
caggtgttacaggacacactcttaccagacctgcacaagaacctggatgatttcagacag
aagcgcagcatgggtctgactctggctgaaaacgagctgtcgaagctggacttggagcgt
ggaaaagatcagcaggccttggagaaggaatgctcctgtgctgaacacatcctctccaag
atagaggatatcttgttgacatctcatcccacagaagaggagaagtgccaaacaatgcag
tatgtgattcacacctatatgaagcaccttggggtgaaagcaaaggagcctcgcggcctc
gaacataaacgagcgcgcatcaatttcctgcctaagattaagaagagtatcaagcctgag
aaggaaggtgaggagaaggtaaaaaagcctcggtttcccaacatcctcggcccgccacgg
cgtctgagcagagtagattccacttcagtcggtaaggccgtggagataaacaagcagcgg
tcaccaaaacagccctctcagccagccatcggcatccctgaacagtctgactcttcctcg
aattctggacggatccgtggaaatcagctcagtgaaggatcggacaacggcacacaattt
tttccctccaccacctcccctacacacagctcgtccaccggtcaggcctcagataccagt
ggacaagactcagactccaatgcgtctccattctgcatccagcccagactgggagagagt
ctgcagtctggcgaccatcaggacggagtcttcagtccgaccagcactccgtttgacttc
agcccctccaacctggagcagttacaagaggaagaccaggagcctttcaggatggaggtg
cagtgtccggtgagttcagctgacatccagagtgaagacgatcagggaggtgagatggag
tttgaagaggaccccgtgaactggcagagtctggtcagccgaggtgtcctggcaagctta
acgcaacaggagatcaagcggcaggaagtcatcaatgagctgttctacactgagcgtgcc
cacttgcggatgctgaaagtgttggactgtgttttcaaccagaggttgagcagagatgct
atcctcccgccagaagatatcaaacacatctttattaacctggaggaaatcattcagctg
catgtttctataacagagcaaatgacagcaatcaggaagaggagtgagacatctgtgatc
ggtcagattgcagatgatctcctggcatggttcagcggggaggaagaggagaagataaaa
agagcagtgggaactttctgtagtaaccagccgtctgcactggagctcatcaagaccagg
cagaagaaagaccagaggttcacgttattcatgcaggaagctgagagcaaccgtctgtgt
cgccggctgcagcttaaagacatcattcctgtagagatgcagagagtgaccaagtaccca
cttctgctggacaacattgccaagtacacagaagatggtgaggagagggaaaaagtgaag
aaagctggagaatgttgcaaaaagatccttaaccatgtcaaccaggctgtcaaagaggct
gagaacaaacagaggctagaggagtatcagagaaggttagacctctcgtcactcaaacag
agtgaaaaccccatgatcctggagctgaagaatctggacctgaccaagcggaagatggtg
catgagggacctctctcctggaaagtcaacaaagacaaggcaattgagctgtacacgatc
ctcctggaggacattctggttttactgcagaaacaggacgagcgtctggtcctcaaattc
cacggcaagaatctggccagtgctgcagacaccaaacaaatcttcagccccatcatcaaa
ctcaacactgtcttggttcggccagtggcaactgacaacaggtctttctttgtgctgtcc
atgtcggaaaacggggctcagatctatgagctgatggctcagacggtgtcagatcagaga
acgtggcagtgtttgatcacgcaatgtgctgacgccatgaagtcccaacctcataacaga
gacacacctgcagctcaatctgatgctgagcgggacgctattgagatcatcaaacatggg
atgtctaaggagagcaaagaacctgaccgcacatcaagtggaagcatccattcttcaggc
atccaagataaagatgccacctcttctccagacattcagtctccaccgagtatgaaccct
tttgatgacatgaaatcagaagacgaggaagaggagctggccatagcagacagacaggag
gaggaggaagatgaggaggatgaagaggtggatgaagcagaactagaggcttttcttgac
gggcagctggcagacagactgcccttcctgcaggaagggtcacgtcagggcatcgccctt
gaaaaccaagagcacaatgcgtttgtcttaccctcctccaaaggcgaagaggctctcaag
acattggcgatgctgaagcaggctcttttcaaccacattataagcagagaggcagaggag
gagaacaagcagagtagggcccctgggtgtctactcagtgcctctctgcctgggagccct
gaggggccctctgctgccagtgatgagagccaagcatctgcaagctcacagaaagacaac
cctcagctcctctcaggacgcacaggtctgcctgagccaactgaacacaatgctctgctt
atccttccaggtggttttgtggttatggatttcagtggggtctctgaggaaaacagcact
gatgatgatgtgggagttgcatgtgatgtgggaatcgatatgcggaaactgctgtcctcc
tcctcgcagacagagggcggcggccctaacctcagcaggcagcttatgacccacctacgc
ctcctacaggccgacctgcagtatctgaaggaggtggagatgaagtacaacgagatgcga
caaacacacagtgacctggctactgactcagatgacaaccaatga
DBGET
integrated database retrieval system
