Micropterus salmoides (largemouth bass): 119895909
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Entry
119895909 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119895909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119895909
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119895909
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119895909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119895909
NCBI-ProteinID:
XP_038565250
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVALLNHEPTGKPITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMEQPR
WPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYNSQGCS
GSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCPL
CMHNIMGMERQPQRNRLQQSPEQSQGFLHAQPYSSPRNHPFPQHAIPFSMRPHYPRGPSG
PYPSLGHYTGSSPRDTQTLRFLTSRPLGSGCGYHLPAEVPGRPHRIGGNCRTSTNHYTPR
RSCHNYRSSCPAQRSVSSSRLHHTANVTPQPRGAPAHSRQDDGSCSGGSYHTERSGYLAD
GPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSGHAPR
RNSLEACAQSRPRSLDSVVNKAGCPEEQPQTVFSHIHFHRHRHHHYEEGEHSQGLSRGSD
EEQGAAAAAAPAPLVLDKDSPVCPPKHSSCQCPKPDPTDRPCPGKECLDHDPSSPIGPPV
LVSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVHDGPSVRFHQSLDLQDDRSIHIHYGQGP
GFCCSPPELHPALLPVPLILDSGGMEDWPYCAGAHVVWQKRVQQAHSEPQLLGPGTSMDR
PPCRFHHGPAADRNTDICLYCQTLHHNQGSEEESGV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccaaccgggcctggagtccgagcggccggccctccgagcggtcatc
aaggtggcattgctgaatcacgagccgacggggaaacccatcactctggagggggtgttc
gtgggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccccctgtctctg
tgcaacacaagtgaggatgagcgacaagagagtgattttatcaccattgtcaaactggag
cacagggtaccccgctgtctgccgcttctcgataaggctcgcatggcactggataaagga
gctcaggctgttatctttgatgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagactcccttccccgtccagtcgtcctggtggaggcagaggatgctgaggagttgatg
ggtttggtcaacaagaacgaggaggccaaagttcggattgagatcatggagcagcccaga
tggccacattatgatgtgggcatcctgctcaccatcgtcctcgctattctgaccattgtc
ctaatcttcgccttccgctacaagtgcaagtccaacagaacctgggattctgtccatcag
cagaccatgcgggccatcagtcgattggagaccaaaacctacaactcccagggctgctca
ggctctcagcgccaccgcgcggcctgggggtcagccagcagctcaaactcgagccctgtc
tgtgctatctgcctggaggagttccaggacgggcagcatttgaggatcatctcctgtgct
catgagttccacaaagactgcgtcgacccctggctgctacagcaccgcacctgtcccctc
tgcatgcacaacatcatggggatggagcgacagccccagaggaacagactccagcagagt
ccagagcaaagccagggtttcctgcacgctcagccttacagcagccctcgcaaccaccct
ttcccccagcatgccatccccttctctatgaggccccactatcctcgtggaccctctgga
ccctatccctctctgggccactacactggctcttctcccagagacacccaaactctgcgt
ttcctcaccagcaggccacttggctccggctgtgggtaccaccttcctgcagaggttccc
ggaaggccccacagaattggaggtaactgtaggacttccaccaaccattacacgccccgt
cggtcctgtcacaactatcgctcatcctgtccagcccagcgcagtgtgtctagctcaaga
ctgcaccacactgccaatgtcacaccacagccccgcggagcgccagcccacagccggcaa
gacgatggcagctgctccggtggcagctaccacacagaacgcagcggatacttggctgac
gggccagcgagtgactccagctcagggccatgccatggctcctccagcgactcagttctc
aactgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagctct
ctcagcagtgactacgatccgtttgtgtattatgggccaggttctgggcacgccccccgc
aggaacagcctggaggcttgtgcccagtcccggcccagatctctagattctgttgtgaac
aaagcgggctgccctgaagaacagccgcagactgtgttcagccacatccacttccaccgt
cacagacaccaccactatgaggagggggagcatagccagggcctgagcagaggctcagac
gaggagcagggggcagctgctgcagctgcacccgctcctcttgtgctggacaaagactca
cctgtgtgccctcctaagcacagttcctgccagtgcccaaagccagatcccacagatcgg
ccctgtcctgggaaagagtgtctggaccatgaccccagtagccctataggaccacctgtc
ctggtgtccccaatccccttacaacttcaaccccactgctgccaccagggacatggacac
cctcccgctcctcttgggcgagtgggtggctgtgtgcatgatggcccttctgttcgcttc
caccagagcttagatctgcaggacgacagaagcatccacatccactacggtcagggcccg
ggcttctgctgctctcctcctgagttgcaccctgccttgcttcctgtgcccctaattctg
gactctggaggtatggaggactggccttactgtgccggagcccatgttgtgtggcaaaag
cgggtgcagcaggcccactcagagcctcagctcttggggcctgggacctctatggacagg
ccaccctgcaggttccaccacggccctgctgctgaccgcaacacagacatttgtttgtac
tgccaaacattacaccacaatcagggatcagaagaggagtctggtgtgtga
DBGET
integrated database retrieval system
