Micropterus salmoides (largemouth bass): 119895976
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Entry
119895976 CDS
T07309
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119895976
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119895976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
BUD22
Sina_ZnF
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
119895976
NCBI-ProteinID:
XP_038565348
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSHRSRASRLRQHVHCDSCYSRRCRAQVEVSVCCAVIPCRLHCGALFHLCKEEDHMLLCP
NVRVPCLNAEYGCPVHLPRSSRAAHLQVCPASVVCCSMEWNRWPANDGLSNPNTALHENL
FLEREQGGCLDLAMALKDQDRLFHSIKMKKLFPELVQSVEEEEKEEERKEEERMKEKQRQ
KKATMEKEAAERAAAKEASGQAWEPFNMFDVNTPDKKDNEDEDEVEVELTLEEREAIARG
SGVNADLLENYSAWERMFSMEMGGCRVAEGAAVANKGKELAKGRGNGLDTLTEEDIADTY
MGATASNTHKKVSSAYIASTSSSSCLAGNLKKKFVYGHLEPMKIITVRTFKIPTSFSAKQ
SRIRNPGFYKRESQAVDTSDLGVALEEMPVWEEVQACLLCSLEKELRGHLIAESVCTDGL
LQDEGTQTYNFLSAPFRRNTSLADLTTAKPLELHLQLQLESVTNRHHKASSAFTFLCGHT
FQRREYGKHYKNIHSDIQMSLSGWFEQRCPLAYLGCTYSQRRLQPSTHEATVSYNEDLGC
FSLRPTIPVSLDVASQPSRSTVNSSTTHRKHGSRAGGGEDSLSSLPYEVLCHMASFLDSL
SLSQLALVSRLMRQVCSSLLQERGMVTLRWERKTYSHGGAKWRVNQRVWQFSTLFSPVDT
WSFQDVPSMSEHLKVCPCYETESRTEKIHLPRIREEVQTKPSCKGPTLVNLFQQKRIMM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgttctcgggcctccaggttgcgacagcatgtccactgtgattcctgctac
agtcggcgctgcagggcccaggtggaagtctctgtgtgctgtgcggtcatcccctgccgc
ctgcactgtggcgctctattccacctgtgcaaagaggaggatcacatgctgctctgccct
aacgtgagggtgccctgcctcaacgctgagtacggctgtccagtccacctgcctcggtcc
tcccgggcagctcaccttcaggtgtgtccggccagcgtggtgtgctgctccatggagtgg
aaccgctggccagccaacgacggcctttctaatccgaacacagcactgcatgaaaacctg
tttttggaaagagagcaaggaggatgtctggatctggccatggccctgaaagatcaggac
cgcctgtttcactccataaagatgaagaaactgtttccggagctggtccagagtgtggag
gaggaggagaaagaggaagagaggaaagaggaagagaggatgaaggagaagcaaaggcag
aaaaaggccaccatggagaaggaggcagcagaaagggcagctgcaaaggaagccagtggt
caagcctgggagccttttaacatgtttgacgtcaacacccctgataaaaaagacaatgag
gatgaagatgaggttgaggttgagctaaccctggaggagagagaggctattgccaggggc
tcaggagtgaatgctgatttgttggaaaactatagcgcttgggagcgcatgttcagtatg
gagatgggtggctgcagggtagctgaaggggcagctgtggccaacaaaggcaaagaactg
gctaaagggagaggaaacggcctggacactctcacagaggaagatatagcagatacctac
atgggggccacagcatcaaacacccacaagaaggtgagcagtgcatacattgcttccaca
tcctcctcttcctgtctcgccggaaatctgaagaagaaatttgtgtacggtcatctggag
ccaatgaagattatcactgtgcgtacctttaaaatcccaaccagcttctctgccaagcag
agccgtatccgcaaccctggtttctacaaaagggagagtcaagctgtggatacaagtgac
ctgggggtggcgctagaggagatgccagtgtgggaggaagttcaggcctgtctgctgtgc
tccctggagaaggagctaaggggtcacctcattgcagagagcgtatgcacagatggtctg
ttacaagatgaaggcacacagacctacaacttcctgtctgctcctttccggagaaacacg
tcgctggctgacctgaccactgcaaaaccgctggagctgcaccttcagctgcagttggag
agcgtcaccaatagacaccacaaggccagttccgccttcaccttcctctgtggacacacc
ttccagcgcagagaatatggcaaacattataagaacatccacagtgacatccagatgagt
ttgagcggatggttcgagcagagatgccccctggcatacttgggatgcacctacagccag
aggaggttgcagccctctacacatgaagctactgtcagctacaatgaggatctgggctgc
tttagcctgcgtcccaccatccctgtctctctggatgtcgcctcccagccgtccaggagc
acagtcaactcttccaccactcacagaaagcatggtagtcgggcaggaggaggggaggac
tctttgagctcgctcccctacgaggtgctgtgccacatggccagtttcctggacagtctg
tccctgtcacagctggctctggtgtcccggctcatgagacaggtgtgctcctctctgctg
caggagagagggatggtcaccctccgctgggagaggaagacctactcacatgggggagcc
aagtggagggtgaatcagagggtatggcagttcagcaccttgttctctcctgtggacact
tggtccttccaagacgtgccgtccatgtctgagcacctaaaggtgtgtccatgctatgag
acagagtccaggacagagaagattcacctgccgcgtatcagggaagaagttcaaaccaaa
ccaagctgcaaaggccccacgctggttaacttgttccagcagaagaggatcatgatgtaa
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