Micropterus salmoides (largemouth bass): 119896001
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Entry
119896001 CDS
T07309
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119896001 (trpc4a)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119896001 (trpc4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
119896001
NCBI-ProteinID:
XP_038565388
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRSESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNSDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKFFTCVFIGLLYPMFALCYLIVPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQGRQNRQGPAPTTIEWMILPWVLGFIWAE
IKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKVPDAKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTEFV
GATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLPPP
FNIVPSPKSFWYLMCWIKRQVCKRTSSKRPGTFGALGRRAAENLRVNHQYQEVLRNLVKR
YVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPALQGAKASGSSMDSNLA
YPSSSLEVSPCPETSQVKSKLNRFKLITSILKQGSSTASPRPPEAFNGLPNGLLSVASDE
SSSEKSSQRRNFPKDINDFGLFQKHHCGRNEAMSSTEVSRKMYSLSEETTESGGSEAEGQ
DKEHATGGTDEKGLLETENKDKAAVHEAMNESSEVSNMNNSLDGSGQKDREDKDNESLPC
SDTVAGGCLSGSSREELQAK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaactgtactaccggcggactgacagctcctcgtaccgggaccgcatcccgctg
agaattgtgaggtcggagtcggagctatcgcctttggagaaagcctacctcggagctgtg
gagaagggggactatgctagtgtcaaacaggctctggaggaagcagagatctacttcaag
atcaacatcaactgcatcgaccctctcggacgcacggctctgctgattgccattgaaaac
gagaacctggaaatcattgaactcttgctgagcttcagcgtctacgtcggcgatgccctg
ctgcacgcaatccgcaaggaagtggtgggagctgtggagctgctgctcaatcacaagaag
cctagtggtggcatgcaggttcctcctatcttattggacaagcagttctctgacttcacc
cctgacatcactcccatcatcctcgccgcacacaccaataactatgaaattattaagctt
ctggtgcagaaaggcgtgtctatgccgcagccacatgaggtgcgctgtaactgtgtggag
tgtgtgtctagttcagacgtggacagcctgcggcactcgcgctcacgcctcaatatctac
aaagcactgtcaagtccctcactaattgcactctccagtgaggaccccttccttactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaacgagttcaaatcagag
tatgaggagctgtctcagcagtgtaaacagtttgccaaagacctcctggaccagacaaga
agctccagagagctagagatgatcctcaactacagagatgacatcaacttactggaggag
gagggcaacagcgacctggcaagactcaagctagctatcaagtaccaccaaaaagagttt
gtagctcagccaaactgccagcagcttttggcgtcccggtggtatgatgagttccctggc
tggagacgtcgtcactgggcagtcaagttctttacctgtgtcttcatcgggctcctctac
cccatgtttgctctctgctacctcatcgttcctaagagtcgctacggcctcttcatccgc
aagccgtttatcaagttcatctgccacacagcatcctacctgacctttttgttcctgctg
ctcctcgcctcccaacacatcgtcaccacagagcagggcaggcagaacaggcagggtccc
gcaccaaccaccatagaatggatgatcctgccctgggtgctgggattcatctgggcagag
atcaaacagatgtgggatggtggtttccaagactatatccatgattggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatctccctcaagattgtagcctacacg
aagtacagtggtagtaaacccaggaaccagtgggagatgtggcacccaacacttgtagct
gaggcagtgtttgccatagcaaacattttcagttccctgcgcctcatctcgctgttcaca
gccaactctcacctggggccacttcagatctctctggggagaatgctgctcgacatcctt
aagttcctcttcatctattgtctggtcctactggcctttgcaaatggcctgaaccagctg
tacttttactatgagaccaaggttccagatgccaaatgcaagggcatccgctgtgtggag
cagaataacgctttctccactttatttgagaccctgcagtctctcttctggtcaatcttt
ggtctgatcagcctgtatgtgaccaacgtggatgcagaccatcagttcactgagtttgtc
ggtgccaccatgttcggcacctacaacatcatctcactggtggtgctcctcaacatgctc
atagccatgatgaacaactcctaccagcacattgctgatcatgcagacattgagtggaag
tttgccaggacaaagctgtggatgagttactttgaagaaggggccacactgccgcccccc
ttcaacatcgtccctagccccaaatcattctggtacctcatgtgctggatcaagaggcaa
gtgtgcaagaggacaagctccaagcgccccggaacttttggagctctcggaagacgagca
gcagagaacctgagggtaaaccatcagtatcaggaggtactgaggaacttggtgaaacgt
tatgtggccgccatgatcagagatgccaaaacagaggaaggcctgactgaagagaatttc
aaggagctcaaacaagatatctccagttttcgttatgaggtgatgggcatgatgaagaca
gggaagcctgctctacagggggcaaaggccagtggcagctcaatggactccaatcttgct
taccccagctcctcgctcgaggtttctccctgccctgagaccagccaggtgaagagcaaa
ctcaatcgattcaagctcatcacgtcaatcctcaagcagggcagttctacagcttcaccc
aggccgcctgaagccttcaatggtctacctaatggactcttgtccgtggcctctgatgag
agctccagcgaaaagtcaagccagaggagaaatttccccaaagatattaatgactttggc
ttattccagaaacaccactgtggcagaaatgaagccatgtcaagtacagaggtttccaga
aagatgtactctttgtcagaagaaacaaccgagtctgggggctcagaagcagaggggcag
gacaaagagcatgcaacaggaggtacggatgagaaaggactcctggagacagaaaataag
gacaaagctgcagtacatgaggctatgaatgaaagtagcgaggtctcgaatatgaataac
agtttggatggaagtgggcaaaaagacagagaggacaaggacaatgagagtttaccctgc
agtgacacagtagctggtggatgtctgtcagggtcatccagagaagaactacaggccaag
taa
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