Micropterus salmoides (largemouth bass): 119896111
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Entry
119896111 CDS
T07309
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msam03012
]
119896111
Translation factors [BR:
msam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119896111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
Motif
Other DBs
NCBI-GeneID:
119896111
NCBI-ProteinID:
XP_038565524
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search
MGNIVQCCHTLSNYFKCKDARAKGEAERSPLLSSEESDPDSPSLTDDMEDDLLTVSTGVT
NPALEPEHFLFPDIILSSNLGEDVTLVEPMVCLLVSEEDEGARVDEPGDGGQERSNRGRN
RGYSEVETQTEVETQIDMGVQTQTESQAEVQAQTVIRNVTVERGVNTLTNSGTTKEMAVD
EEAEQEKLKETHIHEDLTLTKHAFQTEQYIELIQELNTVDDNVFKSECTSVMLTEHNVNK
MDENIAAVESQKYIQPTKPSIKTTETVETFDPAEDLSQQSNRGNYQMGQATVVSDQNVIE
HNISHTKTNHHTGQTADEAILNPDHIQCQENLDLLKREEDNNKTFLQRVLVTILPQVEEE
EGAETMQMTLFSVDRLFMAAARVKAPPSQIEDPEDDCPEQSEQLSIRDIVNLQEMGFTVR
IQPPGTESFQLQVSGQLLVAELHQVLMEHEITCHRTCYSLQLGGITLDNLAELSSIEGIQ
DGAVIKVVEDSYSVRDARLHLRHVRDLLRSLDPADAYNGVNCSSLSYLSFYTRGDQDSDS
KRIRRASEKESIYCSPPEYVLPGCKDRLLTPLQPVRDDGKPLQCLRLLTMSSWNPPPGNR
KMHGDLMYLNVLTMEDKELNITSSTRGFYLNQSTAFNFNPKPAVPKILCHSLVELLNQVS
PAFRKNFSALQKKRVQQHPYERIAAPFQVFTWIARHEDHTLDCVRAEETHTSRMGQDEHT
AGQSRDWNEELQGCRELSRNSLQERLQRERSIFKTNSDFVAAATRGAVAIIDGNVMPLNP
GEAPHMQMFIWNNIFFSLGFDMAEHYRPLGGNTAAHAAAICDLRGAQAYVSVDIEGLHTL
GTAVVDYRGIRVIAQTIVPGILEKNQEQSIVYGSNDYGKTVFTHPRFLELLDKTSKPLRI
QRHQVLDHSNSPVDLCSGIETKGILGNDGRPYILDLLRTFPPDLNFQLSETEERSEAPKE
CQSFGYPQKHHHSLASLRPELIEAFVQQRYELYVKMVSQGLIQLEEHEKATEQSEELVCE
PRTGDTATAEFQRRNVIKEACEAVGSVSDSCFDIRFNPDVCSPGVSVSSECAEEVQRQRQ
LLWDAAAFLLSNQIPAVLRDCLDHTAVPMDGATLTSALHQRGVNVRYLGTLLRELDRVDE
RGRLSHIQRISISEVIIRSAKHIFRTYLQDVEPAVFSAAVSHFLNCLLSSSSCFPDSCSE
KQLPRRRSRRRRSHGSRVSSLTDGVWARLTPTELWSRVRTEAGDYYHYTIDSESIDEVIE
KHNLQRISLLREIAIKTGIQVQLKEYVFEYRHRPVFSEEDVVNMFPVVKHLKPTGTDATR
LVQHAQVAVQQGLLKDGYELISQALTLFSSVCGVLHEDVCMCLRLLGRLSYILGEYADAL
SHQEKAVMSSERVQGIDHPQTIQDYTYLALYCFAGGRLSTSLQLLYRARYLTLLVSGEDH
PHVALLDSMLGLVLHGLMEYELSLKFLQNALILTSKYHGATSLKYAHGHHLLATVYESKG
EFRSALQHEKEAYSIYKSQVGEDHDSTKESSEYLKSLTQQGVILQKAINHIYSNTPSDCI
PPPKFSTPCLPTILQQLNLTCGIILIALSAKDIADLRTELKGKEKSKVEELEKKI
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagtccagtgctgtcacacactgtcaaactactttaagtgtaaagatgca
cgggccaagggtgaggcagaaagatcccctctgctatctagcgaggagagtgatcctgac
tcgccgagcttgacggacgacatggaggacgatctgttaactgtctccaccggtgtgaca
aacccagccctcgaaccagagcacttcctgtttccggacatcatcctgagcagcaacctg
ggagaggacgtgactctggtggagccgatggtgtgtctgctggtgtctgaggaggatgag
ggagcgagggtggatgagccaggagatggaggacaagagaggagcaacagggggagaaac
agggggtattctgaggttgagacacagactgaggtggaaacacagattgatatgggggta
cagactcagacagagtcacaggcagaagttcaggcacaaacagtgatccgtaatgtgact
gtggagagaggagtaaacacactaacaaattctggcactacaaaagagatggctgtggat
gaggaagctgaacaggaaaaactgaaagagactcacatccatgaggacctgactttaaca
aagcatgcatttcaaactgaacaatatatagagctaatacaggagttaaacacagttgac
gacaatgtctttaagtcagagtgcacctcagtgatgctgactgaacacaatgtaaacaaa
atggatgagaacatcgctgcagtggagtcacaaaagtacattcagccgacaaaacccagc
atcaaaaccactgagactgtggagacctttgaccctgctgaggacctgtcacaacagagt
aatcgggggaattaccagatgggacaggcgactgtggtgtcagatcagaatgtaattgaa
cataacattagccacacaaaaacaaaccaccacacaggtcagacagcagatgaggcaatt
ttaaatccagatcatattcaatgccaggaaaatttggacctactaaagagggaagaggac
aacaacaagacttttctgcagcgtgttttggtgacaattctgccacaggtggaggaagag
gaaggggctgagacaatgcaaatgaccttgttttcagttgacaggttgtttatggcagca
gcacgtgtcaaagcgcctccaagtcaaattgaagaccctgaggatgattgcccagagcag
tctgagcaacttagcatccgtgacatagtcaatctacaagagatgggctttactgtcaga
atccaaccacctgggacagaaagttttcagcttcaggtgtcaggccaactgctggtggcg
gagctgcatcaggtgctgatggagcacgagatcacctgccaccgcacatgctattccctc
cagctgggaggcatcacacttgacaacctcgcagagctgagctccatcgagggcatccag
gacggagctgtgatcaaggtggtggaggattcttattcagtgcgcgatgctcgtcttcat
ctcagacatgtacgggatcttctgaggagccttgaccccgcagatgcgtacaacggagtc
aactgcagctcactgtcttacctctccttttacaccagaggagaccaggacagtgacagt
aagaggataaggcgagcttctgaaaaggagtctatttactgcagccctccagaatatgtc
ctccctgggtgtaaggaccggttacttactccactgcagccggtcagagatgatgggaag
ccattacagtgcctgcggcttctgaccatgagcagctggaacccccctccaggaaacagg
aagatgcatggggacttaatgtacctcaatgtcctgactatggaagacaaagaactcaac
attacatcttctacacgcggtttctacctcaaccagtcaactgccttcaacttcaacccc
aagccagcagttcccaagatcctttgccactctctagtcgagctgctgaatcaagtcagc
cctgctttcagaaaaaacttcagtgccctgcagaagaagagagtccagcaacacccttat
gagcggatcgcagcacctttccaagtgttcacctggatcgcccgtcatgaagaccacacc
ctcgactgtgtccgagcggaggagactcataccagtcgcatgggccaggacgagcacaca
gctgggcagagtcgggactggaatgaggagctgcagggatgcagggaactcagcaggaac
tccctccaggagcgcctgcaaagagagaggagcatattcaagaccaacagtgactttgtt
gctgctgcaacacgaggtgctgtagccattatcgacggtaacgtgatgccgttaaaccca
ggggaggcacctcatatgcagatgttcatctggaacaatatcttcttcagcctggggttc
gacatggctgagcactaccgcccactagggggcaacactgctgctcatgctgctgccatc
tgtgacctgagaggagcacaggcatatgtatctgtcgacatagaggggcttcacacactt
ggaacagctgtagtggattaccgtggtatccgtgttattgcccagacgattgttcctggg
atactggagaaaaatcaggagcagagtatagtctacggctctaatgactacgggaaaact
gtatttacacaccccaggtttctagagcttctggataaaactagtaaaccactaagaatc
caacgtcaccaggtgctcgaccacagcaacagccctgtggacctttgctctggcattgag
accaaaggcatcctgggtaatgacggaagaccctacattttggaccttctgcgcaccttc
cctcccgaccttaacttccagctctcagagacagaggagaggagcgaggcgccgaaagag
tgtcagagctttggttacccccagaaacatcatcacagcctggccagcctgagaccagag
ctgatagaagccttcgtgcagcaaaggtatgaactttatgtcaagatggtgtcccagggg
ctcatccagctggaagaacatgaaaaagccacggagcagagtgaagagctggtctgtgag
cccagaaccggagacacagccacagccgaatttcagagaagaaatgtgatcaaggaagct
tgtgaggctgttggatcagtcagtgactcttgctttgacatccgcttcaatcctgatgtt
tgctctccaggtgttagtgtctcctccgagtgtgctgaggaggttcagaggcagagacag
ttgttatgggacgcggctgcttttctactgtccaatcagattccagcagtgctgagggac
tgtctcgaccacacagcagtgccgatggatggagcgaccctgacctcagcgctgcaccag
cggggcgtgaacgtacgatacttgggcaccctgctgagggagttggacagggtggacgag
agagggagactcagccacatacaaagaatttctatcagtgaagtcatcatcagaagtgca
aaacacatcttcaggacctatctacaggacgtcgaacctgcagttttttccgctgctgtc
agtcactttttgaactgcctcctgagctcctcctcctgtttccctgactcctgctcagaa
aagcaactccctcgccgcaggagccgacgtcgacggagccacgggagtcgagtctcctcg
ttgacagatggtgtgtgggctagactgacccctactgagctgtggagcagggtcaggact
gaggctggagattattaccactacacaattgacagtgaaagtatagatgaagtgatagaa
aagcacaaccttcagaggatctccctgctgagagagattgccatcaagacgggcatccag
gtgcagttgaaggagtatgtgtttgagtatcgacacaggccagtgtttagtgaggaagat
gttgtcaacatgttccctgtggtcaaacatcttaaacctacgggaacggatgccacacgg
cttgtgcaacacgcacaggtagcagtacagcaggggcttctcaaagacggatatgaattg
attagccaggccctgactctgttcagcagcgtatgtggggtcctgcatgaggatgtgtgc
atgtgcctgcgtctcctgggacgactcagctacatcttgggggaatatgcggatgccctc
agccaccaggaaaaggctgttatgagtagtgagagagtacaaggtatagaccatccacag
accatacaagactatacttacctggccctttattgctttgctggaggccggctttcgacg
tccctacagctgctgtatcgtgctcgatacctcaccctgcttgtgagcggagaagaccat
ccgcacgtcgcactcctggatagtatgctgggtctagtgcttcatggactgatggagtat
gagctttccctaaagttcctgcagaatgccttaattttgacctcaaaataccacggtgcc
acatctctgaagtatgcacacggtcatcacctgctcgccactgtgtacgagagtaaagga
gagtttcgatcagctctgcaacatgagaaagaggcttattcaatatacaagagccaggtt
ggtgaggaccatgacagcacgaaggaaagctcagagtaccttaagagccttactcagcag
ggtgtgatccttcagaaagccatcaaccacatttacagtaacacacctagtgactgtatt
ccacctccaaagttttccacaccatgccttcccacaatccttcagcagctcaacctcaca
tgtggaatcattctcattgccctcagtgctaaagacattgcagatctgaggactgagtta
aaaggaaaggaaaagtctaaagtggaagagctggaaaaaaagatttaa
DBGET
integrated database retrieval system
