Micropterus salmoides (largemouth bass): 119896113
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Entry
119896113 CDS
T07309
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119896113 (supt6h)
03036 Chromosome and associated proteins [BR:
msam03036
]
119896113 (supt6h)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119896113 (supt6h)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119896113 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
119896113
NCBI-ProteinID:
XP_038565526
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKAQRFMEEDDEEEEENTEDQDEQGNLRGLIDDGDEE
EGEEEEGAQGSPSGGGSDSEEEVRHRRKKRRHDDYLDDDDLDLIEENLGVKVKRRKKKYD
RVKTLDDDEEDDDEKDLIADEIFHGDAEGDLEDGEAVDEPLQHADDDEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKNNKKRLKKI
KEVSEDGEEEELEVEQEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGEN
LRDSYQRHETEQFPAEPIELAKDYVCSQFATPEAVLEGTRYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKEIDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLTIDI
CIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKEL
KSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQSKGIRVLGVAYAPS
RDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAHDIENLKKFLSSKKPHVVA
VAGENRDAQMIMEDIKRTISELEQESSLPAVGVELIDNELATLYMNSKKSEVDFRDYPPL
LRQAVSIARKIQDPLIEYAQVCSSDDDILCLKLHPLQEHVVKEDLLSALYCEFINRVNEV
GVDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFI
NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL
EEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPNTEEV
FNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPEL
SEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMK
IDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKLEEELKKKQQRTPYIKRV
IAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE
NAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGSKEKMEELLVR
TKREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEFVTITPDGFRYRSQIFPTVNGLFR
WFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAA
VTGQGQNPNTTPAQWSSSQYGYGGSSGGGGGSSSAYHVFATPQQPIATPLMTPSYSYTTP
SQQALGTPQYPGSTPQSSHSHAHGHTHGGHPSHHGHQGHHSSHHGHSSGTPSSSTSSRGR
TPQQQQPQPKASGSSASAVDWGKMAEQWLKEKEAEGRKKTQRMTPRPSPSPMIESTPMSI
AGDATPLLDEMDR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcattgatagcgaggctgaggagtcagaggaggagtttgaagagaaagac
ctgaagcctaaaaaggcccagaggtttatggaggaagacgatgaagaggaagaagagaac
acagaggaccaggatgaacaaggaaatttacgcggactcattgatgatggagacgaggag
gagggggaggaggaggaaggagctcaagggagtccgagtggaggggggagtgactcagag
gaggaagtgaggcatagacgtaaaaagcgcaggcatgatgactacctggatgatgatgat
cttgacctaattgaagaaaacttgggtgttaaagtgaaaaggaggaagaagaaatatgac
cgtgtaaaaacacttgatgacgacgaagaagatgacgacgagaaggatttgattgcagat
gagatttttcacggtgatgcagagggcgatctggaggatggcgaggctgtcgatgagcct
ctccaacacgcagatgacgacgaagaaggggaggacgaggagtcagatatagacgatttt
attgtggatgatgatgggcaacccatcaccaaaaagaggggcaagaagttctcaggatac
acagatgcagccctccaggaggcccaagaaatctttggtggcgacttcgactttgccgac
tttgacgcagacgcttacgatcagggtgaggaggaggaagaggaccaggatgaagagggc
tgggaccgacccaagaaacagaccaagaggaggcaagggaggaagagcatctttgagatc
tacgagcccagtgagctggaaagtagtcacatgactgaccaagacaatgagatccgcacg
actgacatgcctgagaggttccagttacggtccatccctgttaaacctgctgaggatgat
gagcttgaagaggaagcagaatggatcttcagacatggcttctctactcttactatctcc
atgcaggagagcacagattatctagacagggggacgaccacaaacttcagcagaaaaggc
cccagcacaattgcgaagatcaaagaggccctcaatttcatgaggaatcaacagtttgag
gttccattcatagctttctacaggaaagaatatgtcgagccagagctaaacatcaatgac
ctgtggaaggtgtggcagtgggatgaaaagtggactcagctaaagacccggaagcagaac
ctgacccgtctgtttcagaagatgcagtcctaccagtttgagcagatctcagctgaccct
gacaaacctttggctgacggcatccgtcctctggacaccgctgacatggagaggctgaaa
gatgtgcagacccttgaagagctgggtgacgtgtacaatcacttcttgctctactatggc
cgagacatccccaaaatgcagaatgccgcaaaaaacaacaagaagaggctgaaaaagatc
aaagaagtgtcagaggatggtgaagaagaggaattggaggtagaacaagaagaagaagaa
cagaaaggtcctgacctcaagctggcgtctcgcagagatatgtacagtatctgccagagc
gttggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaat
ctgagagacagttaccagcgtcacgagacggagcagttccctgccgagcccatagagctg
gccaaagactatgtttgcagtcagtttgccactcccgaggcagtgctggagggaacaagg
tacatggtggccatgcaaattgctcgtgaacctctggtcagacatgttctccggcagacc
tttcaggagagggccaagatcaacatcaagcctacaaagaagggcaaaaaggagatagac
gaggctcatttcgcctactccttcaagtatcttaagaacaagccagtaaaagagttgaat
ggggagcagttcttgaagatgtgcctggcagaggacgagggactccttaccattgacatc
tgtatagaccttataggggtgaaaggatatgccggggaccagacatactttgatgagatc
aaacagttctactacagggatgagttcagtcaccaggtgcaagagtggaacaggcagcga
actttagccatagaaagagctctgaatcagttcctgtacccgcagatggccaaggagctt
aagagcaaactgatcgctgaggccaaagagagcattgtcaggtcctgctgtcgtcggttg
tataactggcttaaggtggctccttataggccagatcagcaggttgaggaagacgatgat
ctgatggatgagagtcaaagcaaaggcattcgggtgctgggtgtagcctatgcccccagc
agagacacaccggttttctgtgctctgatcaacggggaaggagaggtggtagacttcttg
cgtctgccctacttcatgaagaggaggaatgcctttagggaggatgagagagagaagaag
gcacacgacattgaaaatctcaagaagtttctgtccagcaagaaacctcatgtggtagct
gtcgccggggaaaaccgagatgcccaaatgataatggaggacatcaagaggactatcagt
gagcttgagcaggagtcctctttgcccgctgttggagtggaactcattgacaatgaattg
gccacactgtacatgaacagcaagaagtctgaggttgatttcagagattaccctcccttg
ctgcgacaggccgtgtcgattgccaggaagatccaggatcccctgatagagtatgcacag
gtttgcagctcagatgacgatattctttgcctcaaactacacccgctacaggaacatgtg
gtgaaggaggatttgctcagtgctctttactgtgaattcatcaaccgtgtcaatgaggtt
ggagtagatgtgaacaaagccattgcccatcctcacactcagagcctggtccagtatgtc
tgcggtctgggtccaaggaagggctcccacctgctgaagattctgaagcagaacaacact
cgtctggaaaacagaacccagctggtcacaatgtgtcacatgggacccaaggtctttata
aactgtgccggtttcatcaagattgacaccgcatcgcttggagacagtacggactcctac
atcgaggttctggatgggtctcgtgtccaccctgagacatacgagtgggctcgcaaaatg
gccgtggacgccctcgagtatgatgagtcggcagaagacgccaacccagccggagctctg
gaggagatcttggaaaatccagaacgtctcaaagacctggacttggatgcctttgctgag
gagcttgagagacagggttacggcaacaaggggattactctgtacgatatccgtgcagag
ctgagctgcagatacaaagacctgagagttgtctacagagtccccaacacagaggaagtc
ttcaacctgctcaccaaggagactccagagaccttttatattggtaagctgatcaccagt
gtagtgactggtattgctcaccggaggcctcaaggagagagctacgaccaggccatccgt
aatgatgctacagggctatggcagtgtcccttctgccagcaggacaactttcctgaactc
agcgaggtgtggaaccactttgacagcggttcttgtccaggtcaggccattggggtgcgg
tccagattggataacggcgtccagggattcattcccaccaagtttctcagtgacaaagtg
gtcaaacaccctgaagagagggtcaaggtgggcatgaccgttcactgccgcatcatgaaa
attgacattgagaaattcagcgtcgatctcacgtgccgcacctcagatttgatggacaag
gccaatgagtggaagctccccaaggacagctactatgactttgacacagagtccgaagat
caaaaactagaggaagagctcaaaaagaaacaacagcgaacaccatatataaagcgtgtg
atcgcccatcccaacttccacaatatcagtttcaaccaggcagagaagatgatggagacc
ctggaccagggagacttgatcatcagacccagcagcaagggagagaaccacctcacagtc
acctggaaagtggctgatggtatctaccagcacgtggatgtgagagaagagggcaaagag
aacgcattcagcttagggcacactctttggatcaataatgaagagtttgaagatctggat
gaaatcactgctcggtacattcagccaatggcgtcatttgcccgagatctgctggggcat
aagtacttccaggagtgcaacgggggaagcaaggagaaaatggaggagttattggtcagg
acaaagagggaaaagcccacttttattccgtactttatttcggcatgtaaagatctgcca
ggaaaattcatattgggctaccaacctcgtggaaaaccacgtgttgagtttgtgaccatc
accccggatggcttccgttaccgttcacagatattccctacagtgaatggactattccgt
tggtttaaggaccattaccaagagcctgtgccaggcatcactcccagcaacagcagccga
acaaggacgcctgcatccctgaatgccacccctgccaatatcaacatcgcagacttgacg
cgcgctgtcaacgccctcccacgcaacatgacctctcagatgttcagtgccatcgctgca
gtcacaggccagggccagaaccccaacaccacccctgcacagtggagctccagccagtac
ggctacggtggcagctcaggaggaggaggagggagttcctctgcttatcatgtatttgcc
acacctcagcagcccattgcgacgcccctgatgacgcccagctactcctacaccacaccg
agccagcaggccctgggcacaccgcagtatcccggctcaaccccgcagtcctcacactct
cacgcacacggccacacacacggaggccacccgtcgcaccacggacatcaaggccatcac
agcagccaccatggccactcgtccggcacgccgtcgtcctccacatcatccagaggacgg
acgccgcagcagcagcagccgcagccaaaggccagcggcagcagcgcctccgcagtggac
tggggcaagatggcggagcaatggctgaaggagaaagaagcggagggtcggaagaaaaca
cagaggatgacgccacgaccgtcacccagccccatgatagagagcacgcccatgtcgatc
gccggagacgccacacccctgctggacgaaatggaccgatag
DBGET
integrated database retrieval system
