Micropterus salmoides (largemouth bass): 119896332
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Entry
119896332 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: HEAT repeat-containing protein 1-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119896332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119896332
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119896332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
Arm
Vac14_Fab1_bd
mTOR_dom
HEAT_EF3_N
RTP1_C1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
119896332
NCBI-ProteinID:
XP_038565699
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MTSLAHQLKRLALPQSDPNLLTRREVASLLFDPKDAAAMDRSTFYALGCTGFEELLGIEP
AFQEFQDTLFSRASLTLERSVQSKEVNEKLDAGISLFLTRLCPYFLLKPAHKCIEWLVHR
NDGAFHIQLYNCDSLLACALPYHDTNVFVRVLQLLRIKDATXRWNWLHCLQKPGVPLSRG
TLITHCYTDLSFMDFICTLVTKSIQXERQAYSGHSGSCSQLRVIFSFYASTIVPALDAVD
KVSDTVISKLLPYVQRGLKSTLTDYKAATYMIVCQLAVKVVMEASLVDTLAVHISKSLLK
EPTLAKXGLGCLIVLLQNQKEGAAGPRAFSRLSSMPALVSTLQVMAASHDVSPLLRYLLP
HLIHAMFTCSSGEAEVGVLESILRSVPLTKGLDQTVARLLLDQYLCQTELSAEHASALDR
RLLPLVRLFESRYGGALDGVLAGHVTDVGSSERKRLFHQFLSLSMSSGKYQILGDSDTSL
LLSLKHPLPSVRVSAVEHLMGIITSGQQQTLEEAFLKDAVEERLQDDVPEVAAAALRVLE
VLIDVLAPEDTVSCLLSLLHRVDLSVAERWLPVLTEAVRLLSDPRLGRGDGELLQRAGWR
LLPLLVISSNHLGLASCVARSSIISQHXLTLNWARELDEVMKRSSEPDFAGLADQRLVST
LTKNLANMEHFCKRDAMEKLAQAVELQRGSGLRGRASFLVLTRTLLLGLGELSGTEHLLA
AQRVYLMLEPLLLEVSRDADAQVRPEEQEEERRVVVSLLRDFISSLRCHDTSFKGDVWWN
PEKLDTNTCCYLGLTCRLFSVVIGGAGEGPAAGGFRELMKLLIQVHLREPPMLFRFLCVL
WGYGSNHGDQLDVKVGPVLQTQALYVGRALLSAQPDATLEELAAADSPVVPSLLCCLSSP
VREVRRAALGALLSLSGADASPFQPITERLLKTSEEIIADPSYLSQALGALHEECQSVKV
KTQQKKLQASMQQLLQSVQTSCCPSYTAAGLLRALGHVNGQSVLSALLPVLDRLLEQSGP
DTPXVLRAEAQLMQLVLGKYNEASAPLLAKDQNCLDLFIRALRTSTQHHPDLPSCQIIAL
EQVTKPFFSALGDESVQQKLLSVMFDLLVESRSPLVSNTVGSVFKAIAVDGQLVANELAP
PEKPKVSVTVQQTRRSKMTQRKPQESGDGGPEGGAVSWQRVTLILELLQHKKKLKRAQML
VPVLFSLLARSLEPSSGDHTNMEYTKQLLLSCLLNVCHKLSPEGGAVGPDVLDEDKFSVE
LVVQCIRASDMPQTHHHALLLLGTAAAIFPEKVLHNIMPIFTFMGANIMRLDDAYSFRVI
DKTVQMVIPALIKAQQLSDGSSSAHVDAVVTRIVHVFADALPHVPDHRRLPILAQLVTTL
GPARFLWVLMLLLFKLHATQTASSVSEKDAALEKDVDFWISLCCQFEVSDQLTSLINILN
FLLQLPDDKDDAPAKRPAGRRGAKKTEQQEEEKVEELIFSVEAHSSKELRHFKFLSVCFT
AQLLGSASFVGKVADGGDGVDESLQRLQQTLLEEILRYIHSVARCVEANADKPAAKFWRV
LLNKSYDVLDKVNSLLPTDTFITVMRGLMGNELPSVRRKAMELLNNKLQHRTQWEEQQVA
ALLQLTGDLLSIVGKGRGKVTAEEEEAEQAINRQTALYSLKLLCRSFASDHREAFVPVLL
QTVELVTSPEEEKNVTGSALLCIAEVVSTLKALAIPHLPRLMPAVLHTLTDRKELLTNEI
YLLSAVTALHRVTETLPHFISPYLQDATLQVCRLTRLVETSSSSSSSSSSSSSAQLSLRL
ASLRSTLATKLPPRVLLPTLTKCYSIMVVDKKGQLAALMSILKEHIGHMEKDQLNHHQSE
LTSFFLAALDFRAERGQGELEKTAEIEGGVIDCLLAMVMKLSEVTFRPLFFKLFDWSKSD
SKERLLTFCRLSDRVAERLKGLFVLFAGNLVKPFADLLRQTNSSETGERLFASCRGEEKS
SLLLQYVLDCLHKIFLYDTQRFLSKERADALMGPLVDQLENMLGGDQVYQQRVIQHLVPC
VGQFSVALADDTQWKTLNYQILLKTRHADSKVRFSALLMLMELASKLKENYMVLLPETIP
FLAELMEDECEEVEQQVQKVVQEMENILGEPLQSYF
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttggcccaccagctgaagaggctcgcgctgcctcagagcgaccccaacctg
ctgacacgcagggaggtcgcctcgctcctcttcgaccccaaagatgccgccgccatggac
agaagcaccttctacgccctcggctgcacagggtttgaggagctgctgggaatcgaaccc
gccttccaggagttccaggacaccctgttcagccgggcctcgctgaccctggagcggagc
gtccaatccaaagaggtcaacgagaagctggacgccggcatctcgctcttcctcacccgc
ctctgcccgtacttcctcctcaagccggctcacaagtgcatcgagtggctggttcaccgt
aacgacggcgccttccacatccagctgtacaactgcgacagcctgctggcgtgcgcgctg
ccgtatcacgacaccaacgtgttcgtcagagtcctgcagctgctcaggatcaaggacgcc
accnaccgctggaactggctgcactgcctgcagaaaccaggcgtgccgttgtccagagga
accctgatcactcactgctacacagacctgagcttcatggacttcatctgcaccctggtc
accaagtccatccagtaagagcgtcaggcgtactcgggacactctggaagctgctcccag
ctcagagtcatcttctccttctacgcatcgaccatcgttcccgctctggacgccgtggac
aaagtgtctgacaccgtcatctccaagctgctgccatatgttcagaggggcctgaagtcg
acgctgacggactacaaagccgccacctacatgatcgtgtgccagctggcggtgaaggtg
gtgatggaggcgagtctggtggacacgctcgccgtgcacatcagcaagtctctgctcaaa
gagcccacgctggccaagngaggtctgggctgcctgatcgtgctgctgcagaaccagaag
gagggcgccgctgggcccagagccttcagccgcctgagctccatgcccgcgttggtttcc
acgctgcaggtcatggcggcgtctcatgacgtcagccctctgctgcgctacctgctgccc
cacctgatccacgccatgttcacctgcagctcaggtgaggccgaggtcggcgtgttggag
tccatcctgcggtccgttcctctgaccaaaggcctggaccaaaccgtggctcgtttgctg
ttggaccagtacctgtgtcagaccgagctctctgctgaacacgcgtcggccctcgaccgg
cgcctgctgcctctggtccgactgttcgagtccagatacggtggagctctggacggcgtc
ctcgcaggtcacgtgaccgacgtcggtagctcggagcggaaacgcctcttccaccagttc
ctgtctctgtcgatgagcagcgggaagtaccagattctgggcgactcggacacgtcgctg
ctgctcagcctgaaacacccgctgccgtcggtccgagtctccgccgtggagcacctgatg
ggcatcatcacctccggacagcagcagactttggaggaagcgttcctgaaagacgccgtc
gaagagcgtctgcaggacgacgtgccggaggtcgcagccgccgctctcagagtgctggag
gtgctgatcgatgtgttggcccccgaggacaccgtgtcctgtttactgtcgctgctgcac
agagtggatctgtcggtggctgagcgctggctgccggtgctgacggaggcggtgcgtcta
ctgtctgacccccggctgggaaggggggacggcgagctgttgcagagggcgggctggagg
ctgctgcccctcctggtgatctcctccaaccatctcggcctcgcctcctgcgtcgcccga
tcctccatcatcagccaacacncgctcaccctgaactgggctcgagagctggacgaggtg
atgaagcggagctctgagcccgacttcgcgggtttggccgaccagcgtctcgtctccacg
ctgaccaagaatctggccaacatggagcacttctgcaaacgggacgccatggagaagctg
gctcaggcggtggagctgcagcggggctccggcctcagagggagggcctccttcctggtg
ctgacccggactctgctgctcggcctcggcgagctgagcggcaccgagcacctgctcgcc
gctcagagggtctacctgatgctggagcccctcctgctggaggtctccagggacgccgac
gcccaggtcagaccagaggagcaggaagaagagcgccgcgtcgtcgtgtctctgctcaga
gacttcatctcctccctcaggtgtcacgacacctccttcaaaggtgacgtgtggtggaac
ccggagaagctggacaccaacacctgctgctacctgggactcacctgccgcctcttcagc
gtcgtcatcggcggcgccggcgaggggccggcagccggcggcttcagagagctgatgaag
ctgctcatccaggttcacctgcgcgagccgccgatgctcttcaggttcctgtgcgtgctg
tggggatacggcagtaaccatggagaccagctggacgtgaaggtcggccccgtcctgcag
actcaggctctgtacgtgggcagggccctgctgagcgcccagccggacgccacgctggag
gagctggccgccgccgactcacccgtggtcccgtccttgctgtgctgcctcagctctccg
gttcgggaggtccggagggcggccctcggcgctctgctgagcctatcgggagccgatgct
tctcccttccagccaatcacagagaggcttctgaagacctcagaggagatcatcgccgac
ccctcgtacctgagccaggctctgggcgcgctccatgaggagtgtcagtctgtgaaggtg
aagacgcagcagaagaagctgcaggcgtcgatgcagcagctgctgcagagcgttcagacc
tcctgctgcccgtcctacaccgccgccggcctgctgcgagcgctgggacacgtcaacgga
cagtccgtcctgtctgccctgcttcctgttctggaccggctcctggagcagagcggcccc
gacaccccanccgtgctgcgggccgaggcccagctgatgcagctcgtcctggggaagtac
aacgaggcgtcggcccccctgctggccaaggaccagaactgtctggatctgtttatcaga
gccctgaggacctcaacccagcaccaccccgacctccccagctgccagatcatcgctctg
gaacaggtcaccaagccgttcttctcggccctcggagacgagtcggtgcagcagaagctg
ctgtcggtgatgttcgacctgctggtggagagcaggagtccgctggtgtccaacaccgtc
ggcagcgttttcaaagcgatcgctgttgacggtcagctggtggccaatgagctcgctcca
ccagagaaacccaaagtcagcgtgacggtgcagcagacccgccggagcaagatgacccag
aggaaacctcaggagagcggcgacggcggtccagaggggggcgctgtgtcgtggcagagg
gtcactctgatcctggagctgctgcagcacaagaagaagctgaagagagcccagatgctg
gtgccggttctgttctcgctgctcgccaggagtctggagccgagttcaggcgaccacacc
aacatggagtacaccaagcagctgctgctcagctgtctactcaacgtctgccacaagctg
tcccctgaaggaggcgccgtggggcccgacgtcctggatgaagataagttcagcgtggag
ctggtggttcagtgcatcagggcgtccgacatgccgcagactcaccaccacgccctgctg
ctgctgggcaccgcggccgccatcttccctgaaaaagtcctgcacaacatcatgcccatc
ttcaccttcatgggcgccaacatcatgcggctggacgacgcctacagcttcagagtcatc
gacaagacggttcagatggtcatacccgctctgatcaaggcgcagcagctctctgacggc
agctcttcggctcacgtggacgctgtggtgaccaggatcgtgcacgtgttcgccgacgcg
ctgccccacgtgcccgatcaccggcggctgcccatcctggctcagctggtgaccacgctg
ggccccgcccgcttcctctgggtcctgatgctgctcctgttcaagctgcacgccacgcag
accgccagctctgtgagcgagaaggacgcggctctggagaaggacgtggacttctggatt
tctctctgctgtcagttcgaggtgagcgaccagctgacctccctcatcaacatcctgaac
ttcctcctgcagctgcccgacgacaaagacgacgctccggcgaagcgcccggccggccgg
cgaggggccaagaagacggagcagcaggaggaggagaaggtggaggagctgatcttcagc
gtggaggctcacagcagcaaagagctgcgacacttcaagttcctctccgtctgcttcacg
gctcagctgctcggctcggccagcttcgtcgggaaggttgcagacggcggagacggcgtg
gacgagtctctccagcggctgcagcagacgctgctggaggagatcctgcgttacatccac
agcgtggctcgctgcgtggaggcgaacgccgacaaacccgccgccaagttctggagagtc
ctgctgaataaatcctacgacgttctggacaaggtgaactccttgttgcccacggatacc
ttcatcacggtgatgagagggctgatgggaaatgagctgccgtcggtcaggaggaaagcc
atggagctgctgaacaacaagctgcagcacaggacgcagtgggaggagcaacaggtggct
gcgctcttacagctgaccggcgatctgctgagcattgtgggtaaaggtcgcggtaaggtc
acggcggaggaggaggaggcggagcaggccatcaaccggcagacggcgctctacagcctc
aagctgctctgtcgcagtttcgcctctgaccaccgggaggcgttcgtccccgtcctgctg
cagacggtggagctcgtcacgtcgccggaggaagagaagaacgtgacgggcagcgctctg
ctctgcatcgccgaggtggtcagcacgctcaaggccctcgccatcccacacttaccgagg
ttgatgccggcggtgctgcacacgctgacggacaggaaggagctgctgaccaatgagatc
tacctgctgagcgccgtcaccgccctgcaccgcgtcacggagacgctgccgcacttcatc
agcccgtacctgcaggacgccaccttacaggtgtgtcggctgactcggctcgtagagacc
tcgtcctcgtcctcctcgtcctcctcgtcttcctcctccgcccagctgtccttacgcctc
gcctccctcaggagcacgctcgccaccaagctgccccccagggtccttctgcccaccctc
accaagtgctacagcatcatggtcgtggacaagaagggtcagctggcggcgttgatgagc
atcctgaaggaacacatcggtcacatggagaaagaccagctcaaccaccaccaatcagag
ctcacctccttcttcctcgccgccctggacttccgtgccgagcgcggtcagggggagctg
gagaagacggcggagatcgaaggcggcgtgatcgactgtctcctcgccatggtgatgaag
ctgtcggaggtcacgttcaggccgctcttcttcaagctgttcgactggagtaaatccgac
agcaaagagcgtctgctgactttctgccggctgtccgaccgcgtcgccgagcggctcaaa
ggactcttcgtcctgttcgcaggaaacctggtgaaaccgttcgctgacctgctgcgacag
accaacagctccgagacaggcgagcggctgttcgcctcgtgtcgaggtgaagagaagagc
agtctgctgctgcagtacgtcctcgactgtctccacaagatcttcctgtacgacacgcag
aggttcctcagcaaagagcgagccgacgccctgatgggcccgctggtcgaccagctggag
aacatgttgggtggagaccaggtgtaccagcagagggtgatccagcacctggttccctgc
gtggggcagttctctgtggcactggctgacgacactcagtggaaaactctcaactaccag
atcctcctgaagaccagacacgccgactccaaggtgcgtttctccgctctgctgatgtta
atggagctggcgtccaaactaaaggagaactacatggtgctgctgccagagaccatcccc
ttcctggctgaactcatggaggatgagtgtgaggaggtggagcagcaggtccagaaggtg
gttcaggagatggagaacatcctgggagaaccgctacagagctacttctaa
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integrated database retrieval system
