Micropterus salmoides (largemouth bass): 119896499
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Entry
119896499 CDS
T07309
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00310
Lysine degradation
msam00514
Other types of O-glycan biosynthesis
msam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119896499 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119896499 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
msam01003
]
119896499 (colgalt1a)
Enzymes [BR:
msam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119896499 (colgalt1a)
Glycosyltransferases [BR:
msam01003
]
O-Glycan biosynthesis
O-linked Gal type
119896499 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
Motif
Other DBs
NCBI-GeneID:
119896499
NCBI-ProteinID:
XP_038565872
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MHGLACLPAAPLLLLLSCCCPARGYFAEERWSPESPLLAPRVLVALICRNSEHSLPYFLG
TIERLNYPKDRMALWVATDHNQDNTTAILRDWLVKVQNLYHYVEWRPKEEPRRYGDEDGP
KHWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNMLWKLMKENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHPEYSWAFDDIIVFAFSARMADVQMFVCNKESYGYFPVPLRSHNTLQDEAESFLHSL
LEVNVRNPPVMPSKYIPVPRKQPDKLGFDEVFMINLQRRTDRRERMLRALYEQEITCKVI
AAVDGKAMNVSEVQAMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERRLHTSL
VIEDDLRFEVFFKRRLKNLMSELEKERLDWDLIYIGRKRMQVDHPEKAVPKIHNLVEADY
SYWTLGYMISLQGAQKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMEQFETRDLKAFSAE
PLLVYPTHYTGDKGYISDTETSTVWDNDKIRTDWDRARSGKTGEQAEISTEAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctcgcctgcctccccgccgccccgctcctcttactcctgtcctgctgctgt
cctgcccggggatattttgcggaggagcgctggagccccgagtctccgctcctcgctccc
cgggtcttggtcgccctcatatgcagaaactccgagcactctttgccgtatttcctcggt
actattgagcgcctcaactatcccaaggaccgaatggcgctgtgggtagcgactgatcat
aaccaggacaacactacagccattctgcgtgactggcttgtgaaggtccagaacctttac
cattatgtagagtggaggccaaaagaggaacccagacgttatggggatgaagatggtccg
aagcactggacagaccttcgttatgagcatgttatgaagcttcggcaagtagcactggag
tctgctcgtgagatgtgggcagactactttatgttggtggactgtgataacctcctcacc
aatcccaatatgctctggaagctcatgaaagagaacaagaccatcattgccccaatgctt
gaatcccgtgcagcctattcaaacttctggtgtggaatgacctcccagggttactataag
cgcacccctgcctacatacccatgaggaagcaggtgcggaagggctgttttgcagttccc
atggtccactccaccttcctgatagacctcaggaaagaggcatccaggcagctggccttt
cacccgccgcacccagaatacagctgggcctttgatgatatcattgtgtttgccttctct
gctcggatggcagatgttcaaatgtttgtgtgtaataaagagagctatggttacttccct
gtgccactgcgatcccataatactttgcaagacgaagctgagagcttcttgcactccctg
ctggaggttaacgtgcgaaatcccccagtgatgccttccaaatacatacctgtgcctaga
aaacaacctgacaaactaggctttgatgaggtgttcatgataaacctgcagaggcggact
gaccgccgagaacgtatgctcagggcattatacgagcaggagataacatgtaaggtcatt
gcagctgttgatggaaaagcgatgaatgtcagtgaagttcaggctatgggcatccacatg
ctccctggatacagtgacccctatcatggtcgcccactgacaaagggagagctgggatgc
ttcctgtcccattacaacatctggaaagagattgtggagcgacgcctgcacacctccctg
gtgattgaagacgacctgcgctttgaggtcttcttcaaacgtcgcttgaagaacttgatg
agtgagctggagaaggagagactggactgggatctcatttatattggtcgcaagagaatg
caagtggatcatccagagaaagcagtgcctaaaatacacaacttagtggaagcagactat
tcatattggacactaggctatatgatatcattacaaggtgcacagaagcttttgaaagcc
gaaccattaaagaggattttgccagtggatgagtttctacctatcatgtacaataaacac
cctgtgtctgattatatggaacagtttgaaaccagggacctgaaggcgttttcagccgag
cctcttctagtgtatccaacacactacacgggcgacaaaggctacatcagcgacactgag
acctccacagtgtgggacaatgacaagatccgtacagactgggacagagcgcgctcagga
aaaactggggagcaggctgagatcagcactgaggcccagaactcagatgtgctccagtct
ccattggacagtacagcacgggacgagctatga
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