Micropterus salmoides (largemouth bass): 119896501
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Entry
119896501 CDS
T07309
Symbol
trim35-12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
KO
K12012
tripartite motif-containing protein 35
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119896501 (trim35-12)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119896501 (trim35-12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
U-box
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-Nse
zf-RING_10
zf-ANAPC11
DUF6809
zf-RING_6
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119896501
NCBI-ProteinID:
XP_038565875
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MQQTTTAIKAAPRQQKPAMALRPRASSQPGKLSFLQSPKVASTLRPRAVSSQSGSMLEEE
LSCPVCCEIFKDPVVLKCSHSFCRVCLQQFWNKKKARRECPICRRKCPLTEPTVSLALKN
VADTFLREQERKTATAGTGTEAGANGAGEGAGEQAGTVEERCITHGEVLKLFCLDDFEVL
CCVCHTSKKHQGHRVCPLEEGAQDLKAEMKQELIPLKKNLRCLYEAKQECDDTTVHIKNQ
TQATAKQIKAEFEQLREFLQKEETARLAALQQEDQEKKELVKKKSESITSCILTFSHAII
AIENEIASSDALFLKNYTNTKKRVQIPHKDPGKVSGALINVAKHVSSIKYHVWEKMVELV
QYTPITLDPNTAYSWLSLSPDLTSVTNSGSLQQLPDNPERFGHFVFVLGSEGFTSGCHAW
EVEVGDKLDWMLGVVKESIDRKGRISGCPEGGFWMISHYDGKYSAMTRPSTPLHLEGELT
RVRVQLDFDSGEVIFSNPISMTPIYTFTDFFTQKMYPFFCPGANINGNNPNPLKICPAKV
VVWNSATW
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaacaaccacagctataaaagcagccccccgccaacagaaaccggccatggcg
ctgcgcccacgtgcttcctctcaacctggaaaactttcttttctccagagtcccaaggtg
gcttcgactcttcgaccccgggctgtttcttcgcagtcaggctccatgttggaagaggag
ctgtcttgtcctgtctgctgcgagattttcaaggaccccgtggtgcttaagtgcagccac
agcttctgccgagtctgtctacagcagttctggaacaagaagaaggccaggcgcgagtgt
cccatctgcaggaggaagtgccccctgacggagcccacagtgagcctggcgctgaagaac
gtggctgacaccttcctgagggagcaggagcgcaagacggccacagctgggacagggaca
gaggctggggccaacggggcaggggagggggcaggggagcaagcagggacggtggaggag
cgctgcatcacacacggggaagtactcaagctcttctgtctggatgactttgaagtcctc
tgctgtgtgtgtcacacctcgaagaagcaccagggacacagagtgtgtcccttggaagag
ggagctcaggaccttaaggcagagatgaagcaagagctgatacctctgaagaaaaacttg
cgttgcctgtatgaagccaagcaggagtgtgatgacacaaccgtgcacatcaagaaccag
actcaggccacagcaaagcagatcaaagcggagtttgagcagctgcgagagtttttgcag
aaggaggagacagcgcgactggctgccctgcagcaggaggaccaggagaagaaagagctg
gtgaagaagaagtcagagagcatcaccagctgtatcctcaccttctctcacgctatcatt
gccattgagaatgagattgcttccagtgatgctctcttccttaagaattacaccaacaca
aagaaaagagtacagatcccacacaaggatccaggaaaagtgtcaggtgctcttataaat
gtggccaagcatgtcagttccatcaagtaccatgtatgggagaagatggtggagctggtt
cagtacacaccgattaccctggaccccaacactgcctactcctggctgtccctctcccca
gacctgaccagtgtcaccaacagtggatccctccagcagctcccggacaatcctgaacgt
ttcggccactttgtgttcgtgctgggctcagagggcttcacttcgggctgccatgcctgg
gaggtggaggtgggcgacaagttggactggatgcttggggtggtcaaggagtccatcgac
agaaaaggccgtatctcgggctgtcctgagggcggtttttggatgatctcgcactacgat
ggcaagtactcggccatgacgaggcccagcaccccgctgcatctggagggagagctgacc
cgagtcagggtgcagctggacttcgactccggagaggtgatcttctccaaccctattagc
atgacgcccatctacacttttaccgacttcttcacccagaagatgtatcccttcttctgc
cctggagccaacataaatggcaataaccccaacccacttaagatctgccccgccaaggtg
gttgtgtggaacagtgcgacatggtga
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