KEGG   Micropterus salmoides (largemouth bass): 119896774
Entry
119896774         CDS       T07309                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msam01009]
    119896774 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119896774 (kdm5a)
Enzymes [BR:msam01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119896774 (kdm5a)
Protein phosphatases and associated proteins [BR:msam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119896774 (kdm5a)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119896774 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 119896774
NCBI-ProteinID: XP_038566114
LinkDB
Position
Unknown
AA seq 1752 aa
MSAFSEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKVLDLYQLSKIVSS
EGGFEMVCKEKRWSKVASRMGFPSGKGTGSLLRSHYERILYPYELFQSGASLTGIQRLYD
EGDDGEELDEGVGEEAVEEEEQDEEDDKEKDGESDAMQTKDHLLPERRSRRLKSERENKE
PKGLKIFGTSPKMVGLEIVSADDGFSKKQRHLKAQAFAIKMRPRKETLEVNFIPQIDLYL
CLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFE
QAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISS
KEVGSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGM
CFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLLHQ
LVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMG
RQCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVFKEMGDMMEEETKLRQALQE
IGVLSSEQEVFELLPDDERQCHKCKTTCFLSALTCSCSPDRLVCLYHAADLCDCPLGNKC
LRYRYDLEEFPSMLYGVKTRAQSYDTWSKRVTEALSADQKNKKDLIELKVLLEDAEDRKY
PEKALFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRTKLTVDELKAFVDQL
YRLPCIISQARQVKELLENVEDFHERAQVALSDELPDSSKLQALLDLGSGLDVELPELPR
LKQELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSE
RWEDKARSCLQARPRHSMATLESIVLEARNIPAYLPNILALREALQKAKEWTAKVEAIQS
GTSYAYLEQLESLLARGRSIPVRLDPLAQVESQVAAARAWRERTARTFLKKNSTYTLLQV
LSPRADIGVYGNSKSKRKRVKELMEKERGGLDPDALSDLEESLEEVRDPSTVVAAFKAKE
QKEVESIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKT
GSQKKLGVGWQSNNKDFKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTE
RAMSWQDRARQSLATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQG
HIQTFQQSGFSRATSPRQCVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVK
SEEVVSHMWPAATPSFCAEHAYSSASKSCVQNVSTPRKQPRKTPLIPRSLEPPVLELSPQ
AKAQLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMEKPLKIKLK
DSEKKRKRKLERAEHHHMLMAAAAAGGASAMGDMRPAKSKELKRVGLELGLGGKPKKKKL
KLNLDKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIREGLEKRKEKKILDIPSKYDWSG
AEDSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICIDCS
RKAAVASGGGMTVEEVAEESVVVLATSLCGAGGVQTLPSSSVVTSWSPASSASHLNPATL
LQQQQQEPQQGS
NT seq 5259 nt   +upstreamnt  +downstreamnt
atgtctgcattttctgagttcgtcccccctcctgaatgcccggtttttgaaccgagttgg
gaggatttctcggatcctttaggctttatcaacaagatccgacccattgcagagaaaacg
ggcatctgcaagatccgaccccccgaggactggcaacctccgtttgcctgcgatgttcgc
aacttccgcttcactcctcgagtacaaagactgaatgaactcgaggccctcactcgggtt
aagctcaactttctggatcaaattgcaaagttctgggagctgcagggatccaagatccga
ttccctcatgtggagagaaaggttttggacctctatcagctcagcaagattgtgtcgtca
gagggcggctttgagatggtgtgtaaagagaagaggtggtccaaggtggccagccgaatg
ggcttcccatccgggaaaggcaccggctcactgctgcgctcccactatgagagaatcctt
tacccgtatgaactcttccagtctggggcatcgctgactggcatccagcggctgtatgac
gaaggagatgatggtgaagaactggatgagggagttggtgaggaggcagtggaggaagag
gaacaagatgaggaggatgataaggagaaagatggggagagtgatgctatgcaaaccaaa
gaccatcttctgcctgagagacgctccaggcgcctcaagtctgagagggaaaacaaggag
ccaaaaggcctgaagatctttggtacaagccccaagatggtcggcttggagattgtgtcg
gctgatgatggattcagcaagaagcagcgtcacctcaaagcccaggccttcgccatcaaa
atgagaccacgcaaggagaccctagaggtcaactttatcccccagattgacctctacctc
tgcctggtgtgtggacggggcgatgaggaggaccggctcctgctgtgtgacgggtgtgac
gacagctaccacaccttctgcctgatcccacctctacaggatgtgccgaagggggactgg
cgctgccctaagtgtgttgctgaggagtgcagtaaacccagggaggcgtttggcttcgag
caggcagtgagggagtacactctccagagcttcggagaaatggctgaccacttcaagtct
gactatttcaacatgcctgtccatatggtccccacagagttggtggagaaagagttctgg
cgcctagtcagcagcatcgaggaggacgtcattgtagagtacggagctgacatcagctcc
aaggaggtgggcagcggatttcctgtcagggacggtaaaaggaggctcctgggagatgag
gaggagtatgccaactcaggctggaacctgaataacatgccagtgctggagcagtcggtg
ctcacccacatcaatgtagacatctcgggtatgaaggtgccctggctctatgtggggatg
tgtttctcctcattctgctggcacatcgaggaccactggagttactccattaacttcctg
cactggggagaaccgaagacttggtatggagtgccggcctctgcagcagagcagctggag
gccgtaatgaaaaagttggctccagagctgttcgattcccaacctgacctcctccatcaa
ctggtcaccatcatgaatccaaatgtcctcatggagcacggtgtccctgtgtacaggact
aatcagtgtgcaggggagtttgtggtgaccttccccagggcctaccacagcggcttcaac
cagggctacaactttgcagaagccgtcaacttctgcactgctgactggttacctatgggt
cgtcagtgtgtggcccattaccgacgcctccaccgctactgcgtcttctcccacgaggag
ctgctgtgcaagatggctgctgatccggagagtcttgatgtggaactggccgctgccgtc
ttcaaggaaatgggagacatgatggaggaggagactaaactcagacaggccctccaagaa
ataggggtgctatcgtcagagcaggaggtttttgaacttttacctgacgatgagcggcag
tgtcacaagtgtaagacaacctgtttcctgtctgcactgacatgttcctgcagccctgat
cggctggtctgtctctaccatgcagcagatctctgcgactgtccgcttggcaacaaatgt
cttcggtatcgctatgatctggaggagtttccatccatgctgtatggggtcaagacacgg
gctcagtcttatgacacctggtcaaagagggtcacagaggccttgtctgctgaccagaaa
aataagaaagatcttattgagctcaaggttttgctggaggatgcagaggacaggaagtat
ccggagaaagctttgtttcgccgcctgagggagatggtgaaagaggcggagacgtgctcc
tccgtagctcagctgctgctcagccgcaaacagcggcacagcagccgtctgcgttcagag
agcagtcgtaaccgtacgaaactgacagtggacgagctgaaagcatttgtggatcagctc
tacaggctgccctgcatcatcagccaggcccgacaagtcaaagagttactggagaatgtg
gaggacttccacgagcgagcccaggtggctctgtcggacgagttgcctgattcttccaag
ctgcaggcactattggatctgggtagcggcctagatgtggagctgccggagctgccccgc
ctgaaacaggagctccagcaggcccgctggctcgacgaggtgcgcgtcaccctggccgag
cctcaccgtgtcaccctggagctgatgaagaggctgatagactctggggtgggcctagct
ccccaccacgctgtggagaaagccatggctgaactgcaagagatcctcactgtctcagag
agatgggaggataaggcccgctcctgcctacaggccaggcctcgacacagcatggcgact
ttggagagcattgtgctggaagctaggaacatcccagcttacctacctaatattttggcc
ctccgagaggcactacagaaggccaaggagtggacggctaaggtggaagccattcagagt
ggcactagctatgcttacctagagcagctggagagcctgctggccaggggtcgctccatc
cccgtccggcttgatccactggcccaggtggagtctcaggtggccgcagctcgagcctgg
agggagagaactgctcgcacctttctcaagaagaactccacgtacacactgctccaggtc
ctcagccctcgcgcagacatcggggtttatggcaacagcaagagcaagagaaaacgcgtc
aaggagctcatggagaaagagagaggaggcttagaccccgacgccctgagcgacctggag
gagagcctcgaagaggtacgagacccttccactgttgtagcagccttcaaagccaaagag
cagaaagaagtggagtcaatccactcactccgtgccgccaatttagccaagatggccatg
gctgaccgcatcgaggaggtcaagttctgcctgtgtcgaaagacggccagcggctttatg
ttgcagtgcgagctttgtaaggactggttccacggagcgtgcgtgcctctgcccaagacg
ggatctcagaagaagctgggtgtgggttggcagagcaataacaaagacttcaaattcctt
tgtccgctgtgtcagcggtcgaggaggccgagattagagaccatcctgtcgctgttggtt
tcgctgcagaagctgccggtgcgtctacctgaaggagaagccctccagtgtttgactgag
agggcaatgagctggcaggaccgagcgcgtcaatctctggccacggaggaactgtcctca
gccctggcaaagctgtcagtgctgagccagcgcatggtggagcaggctgctagggagaaa
actgagaagatcatcaatgccgagctgcagaaagctgctgccaacccagacttgcagggc
cacatccagactttccagcagtccggtttcagcagagccacatcccctcgccagtgcgtg
gactacgacgacgaggagaccgactcagacgaggacatcagggagacttacggttatgac
atgaaggacccaggagaggtgaagccctacctgttctgtgatgaggagattcctgttaag
tctgaggaggtggtcagccacatgtggccggctgccacgccctccttctgcgccgaacac
gcctactcctcagcctccaagtcctgtgtgcaaaatgtgagcacgcccaggaagcagccc
aggaagacccctctgataccacgcagcctggagccgccagtgcttgagctgtcaccgcag
gctaaggcccagctggaggagctgatgatgctgggagacctactggaggtgtctctggat
gagacgcagcacatctggaggatcctgcaggccacacaccccccgtctgaggagaggttc
ctacaggtcatggagcccgacgactctctgatggaaaagcccctgaagataaagctgaaa
gattcagagaagaagaggaaacggaagttagaaagagccgagcaccaccacatgctgatg
gctgccgccgccgccggtggggcttcagcaatgggcgacatgagaccggccaagtccaaa
gaactaaaaagggtggggctggaactgggtcttgggggcaaacccaagaagaagaaactc
aaactcaacctggacaagaaccgggagatgaagcagctggccaaacggttagccaaagag
gagaaggagaggaagagaaaggagaaggcagccgccaaggcagaggccatcagggagggg
ctggagaagaggaaggagaagaagattcttgacattccctccaagtacgactggtccggg
gccgaggattccaacgatgagaacgctgtgtgtgcagccaagaactgccagagaccctgt
aaagataaggtggactgggtgcagtgtgacggcggctgcgatgagtggttccaccaggtg
tgcgtgggcgtgtcgtgcgaaatggccgagaacgaggattacatctgcatagactgctcc
cggaaggccgccgtggcgagcgggggaggcatgaccgtggaggaggtggctgaggagagc
gttgtagtgctggcgacgtcgctgtgcggtgcgggcggtgtgcagactctgccatcgtca
tctgtcgtgacctcgtggtctcctgcctcatccgcctctcatctaaacccagcgacttta
cttcagcagcagcagcaagagcctcagcagggcagttag

DBGET integrated database retrieval system