Micropterus salmoides (largemouth bass): 119896777
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Entry
119896777 CDS
T07309
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msam01001
]
119896777 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119896777 (trim24)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119896777 (trim24)
Protein kinases [BR:
msam01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119896777 (trim24)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119896777 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4_2
zf-C3HC4
PML_CC
DUF5054
DUF1351
FemAB_like
DUF7615
ParB
Motif
Other DBs
NCBI-GeneID:
119896777
NCBI-ProteinID:
XP_038566118
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MDENAENVDNDDIVIIVENEAESLPAEEERLKQQGTFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRSSDPRRDSQGQVDNNKSLGAIRCPECRQECWEMDVLDNFFVKDSAE
VPSSTVEKTTQLCMSCDDNTEATGYCVECVEFLCVTCVEAHQRVKFTRDHTIRQKEEMSP
GKAVGISTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQY
LENMTQQLQEKRKAIEDVSSCIRTGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILVN
QLEALTKDHELGLKKQQEDVNSLSRHLDHVINFTKWATASHSGTALLYCKRLILFQIHYL
MRASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPGRPPITNHQAGPRPEANTGGL
SASALTAAQQRQSTLAQLQMQVDKLSQQPHRQPPPNHWSWYQNVRLPGPPGPPPPTRPIH
GGTSPSQGPPSLGQPVRRYGSHPNPRSPTSSMLHNTGFPPAQSLRDLIHSSSFPPKPMDV
LQGTSRYPQPLSAGAATQTSLHQRGLTEPSFLKRSEPGGSVPSITISIPKPSFVPSLASA
SADKTSAINHITVQARQNSPMAKPSSSDRSTGTSSWKPTFEPPPAPSAKRRRRSSPGPVI
VIKDEPEDEDEVRFVQSSVGSSLPDSSTGAQSKPRQQQKVSAPVPAPGSESKEQRPQPTV
QPESEKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPTLNESPSGEWFCSFC
RDVVSPEMEYVCDSKDDPVCEGFPPVDRRRCERLLLRLFCNDFSTDFQQPASPSETRRYK
ELIKTPMDLSIVKRKLELKEGECYSSPEEFVADVRLIFFNCAKYYKVTSEVGSAGLYLED
YFEEQLKQVYPDRVFPGGREEQMIPPLEDEIDEEEEEEMMEEGMAPVEDDKPQSPAGEGI
PPVEEDLPPLEETTGPIEEEKPETEEKVTDSSEKEMDGKVAATEGGVPPAEEVEQDENTP
VQEMRSSSAADGETKDGEAPSSPKEENPQLPTDKTVEPPETQEESAPAGTAKEEEG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatgccgaaaatgttgacaacgacgacattgtcatcatcgtggagaacgag
gcagaaagtttgccggccgaggaagagaggttgaagcagcaaggcactttcgggctgatg
gacacttgtccgatctgcaagttgagcttccataacagagagcccaaactcctgccgtgt
cttcactctttctgcaagaggtgtctccctgctcccttcaggagctctgacccgaggcgt
gactcgcaaggacaagttgacaacaacaaatcactgggtgccattcggtgtccagagtgc
agacaggaatgctgggagatggacgtgttggataatttctttgtcaaggactccgctgag
gtaccgagcagcaccgtagagaaaaccacccagctgtgtatgagctgcgatgacaacaca
gaggcaacaggttactgcgtggagtgtgtggagtttctgtgtgtgacatgtgttgaggcg
caccaaagggtcaagttcaccagggatcacaccatacgccagaaggaggagatgtcccca
ggtaaagcagtaggtatttccacgcagaagcctgtgttttgtgacatccacaagcaggag
ccactgaagctgttttgtgagacgtgtgaccgactcacctgtcgagactgtcagctgctg
aagcacaaggatcacaactaccagtttttggaggatgcgtacaggaaccacaggcagtat
ctggagaacatgacacagcagttgcaagagaaaagaaaggccatcgaggacgtttccagc
tgtatccgcactggacttcagcaagttgaagaaaaccgcaaggctgtaactaatgaaata
aagaagtccatctgtaacttgattatggagatcaacaggaagggaaagattctcgttaac
cagcttgaggctctgaccaaggaccatgagttgggtttgaaaaagcagcaagaggatgtc
aactctctgagcaggcacctagaccatgtcatcaactttaccaaatgggctacagctagc
catagtggaacagccctcctgtactgcaagagactgatcctttttcagatccattacctg
atgagagcgagctgtaatccctccatcgtccctcagagttctgttcgctttcagtgtcgt
tctggtttctgggccacgaacgtagaccttggttctctggtagtagaaaggggtccgggt
cgaccgcctataaccaaccaccaggcaggacccagaccagaggcaaacactggaggtctc
tcagcctcagcacttacagcagctcagcagcgacagagcacgctggctcagctccagatg
caggtggacaaactttcccagcagccccacaggcagccccctcccaaccactggtcctgg
taccaaaatgtcaggctcccaggaccccccggccctccacccccaaccagacccattcat
ggagggacctccccttcccaaggcccccccagcctgggacagccggtacgcagatatggc
tcccaccccaacccgagaagccccacatcatccatgctgcacaacacaggattcccacct
gctcagtctctgagagatctgatccatagctccagcttccctcctaaacccatggatgtg
ttgcagggtacgtcccgctacccacagcctctgtcggctggagcagctacacagacgtca
ctacaccagcggggcctaacggagccctccttcctgaagaggagtgagccaggtggatca
gtcccctccatcaccatctctatccccaaacccagcttcgttcctagtctcgcttcagca
agtgcagacaaaaccagtgcgattaatcacataacagttcaagcaaggcagaactccccg
atggccaaaccatcttcttcagacagaagcacggggacctcttcctggaagccgactttt
gagcctccacctgccccctcagccaagcgacgaagaaggtcgtcccctgggcccgttatc
gtcataaaggatgaaccagaggacgaggatgaagttcgctttgtgcagtccagtgtaggg
tccagcctgccggacagcagcaccggggctcagtcaaagcctcggcagcagcaaaaggtg
tctgccccagtcccggcccccggatcagagtcgaaagagcagcgtccccagcccacagtg
cagccggagtctgaaaagagagcggagccggaggaagatcctaatgaggactggtgcgct
gtctgtcagaacgggggggagctgctctgttgcgacaagtgccccaaagtttttcatctg
gcctgccacattcccactctgaatgagtcccccagtggcgagtggttctgttcattctgc
cgagacgtcgtatctcctgagatggagtacgtctgtgacagcaaggatgaccctgtctgt
gaagggttcccacctgttgatagaaggaggtgtgagaggttgcttctacgtctgttctgc
aatgacttcagcacggattttcagcagcctgcttctccatcagagacaagaaggtacaaa
gagctgatcaagactccaatggatttgtcaatagtgaagaggaagctggagttgaaggag
ggtgaatgttacagtagcccagaggagtttgtcgcggacgtcaggctcatatttttcaac
tgcgcaaagtactacaaggtgacctcagaagtggggagtgcaggcttgtacttggaggac
tactttgaggaacagttgaaacaagtctacccagatagggtcttccccggagggagggag
gaacagatgatccctcctttggaggacgagatagatgaagaagaagaggaggagatgatg
gaggaaggcatggctcccgttgaagacgataaaccacagagtcctgcaggagaaggaatc
ccccccgtagaagaggacttgcctcctctggaagaaacgacaggccctatagaggaagag
aagccagaaacagaggagaaggtgactgattcaagtgaaaaggagatggatggaaaggta
gcggccacggagggaggcgtgcctcctgcagaggaggtagagcaggacgagaacactcct
gtgcaggagatgagaagctcttcagccgctgatggggaaacaaaagatggtgaagctccc
agctccccgaaagaggagaaccctcagctccctacagacaagacagtagagccacctgaa
acccaggaagagtcagctcctgcaggcacagccaaagaagaggaggggtaa
DBGET
integrated database retrieval system
