Micropterus salmoides (largemouth bass): 119896862
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Entry
119896862 CDS
T07309
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119896862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119896862
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119896862
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119896862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-RING_4
Beta-prop_IFT122_1st
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
119896862
NCBI-ProteinID:
XP_038566217
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MDKNPGSLTPEGILREIQINLLECKVCFEKFSTQQRQHRPQNLSCGHVLCLECITALSHP
LLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLSWSPTSSTPTHRAKGGLGLAAGLTSTA
LHLDKTFGGWGTLVNPTGIAVLGCSGTIVVVHDGEKRVVVFSPQGKKLHSFGRRGLASGE
ICYPLDVAVTLCGYVVVTDAGDKAVKVFTSRGNHVVTVKESFQMPWGVDTDSCGHILVSD
VQAGTLSQVKVDYTHGLILEHQTAFSGLQHPKAVACCHVTGNTAVMEHLPGDSYPPGRHQ
HTRLRVLTKDFHLLCQTDSFSLTLQSTVRLNMSGVAFDRDGDVIVIDSNQGMIWSLGKLQ
NGPALTPLVGDHLIRPVGLVSLNNTVVILDSGNHTVKIYSAKSVARTMI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaatcctggttccctgactccagaggggattctgagagagattcagatcaat
ttattggagtgtaaagtctgcttcgagaagttcagcactcagcagaggcagcacagacca
cagaacctttcctgtggccatgtactctgtctggaatgcatcaccgctctatcccaccct
ctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagcgttgacagcacatcc
cactgccaggttcttagtgacctgcaggagctgctgttgtcttggagtcccacatcatct
actcctactcacagggcaaagggaggccttggcttggctgcaggtctgacatccacagct
ttgcaccttgacaaaacctttggcgggtgggggactctcgtcaaccccactgggatagcc
gttttggggtgttcagggacaatagtggtggtgcacgatggagagaagagggttgtggtg
ttcagtccacagggcaagaagctgcacagttttgggcgaagaggactagccagtggagag
atctgttacccattggatgtggcggtgactctctgtggttacgtggtggtgactgatgca
ggggataaagctgtaaaggtttttacatccagggggaaccatgtagtgacggtaaaagaa
tccttccagatgccctggggtgtggatacagacagctgtggccacatcctggtctcagac
gtccaggccggcacgctgtcccaggtcaaagtggactatactcatggtctcattctggag
catcaaacagccttttcaggcctccagcatccaaaagcggtggcctgctgtcacgtgact
gggaacactgcagtgatggagcatctacctggtgactcatatccaccagggaggcaccaa
cacacaagactgagagtgctaacaaaagacttccacctactttgtcagacagacagtttt
agcctgaccctgcagtccacagtgaggctgaacatgtcaggcgtggcctttgacagagat
ggagatgtgattgtgattgactccaatcagggaatgatttggagtttggggaagctccag
aatggcccagccctgactcctcttgtcggagaccaccttatccgtccagttggactggtg
tcactgaacaacacggtggtcattctggacagtggaaaccatacagtgaagatttattct
gctaaatctgtagctagaaccatgatatag
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integrated database retrieval system
