Micropterus salmoides (largemouth bass): 119896934
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Entry
119896934 CDS
T07309
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119896934 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Cadherin related
119896934 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
EGF
Cadherin_CELSR2_9th
Cadherin_2
hEGF
Cadherin_pro
He_PIG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119896934
NCBI-ProteinID:
XP_038566302
LinkDB
All DBs
Position
Unknown
AA seq
2942 aa
AA seq
DB search
MTKAVTGAVLLHSLLYHLLPLLLLHASPVCLSAQLGHPARYFGQIAENSPAGTPVDGVVL
QLGASGCPGADLNASLMGNYASDFRLVRYRGHRDHRGHLGLVSAKALDREFIAMYQLTVE
LPQCLRRPAAVQVEVSDKNDNIPQFTSGNQTVEVHELTPLGTDLVRFDAKDGDAERNGRV
TFYASPESHLLHVVPQTGQVRLVGSLLGVSQVTLRIYVNDGGDVSLTGEPVFLRINVRRS
SRARRRPRALSEELTYTVTVPDHVRVGDLVFTVPDQRFEQRRFEVISEADSPVQIERDSG
RLYLARSLGEPAEVVVKIQNLRGDEWYLCRLTLSMPSQADLQWAMFPSPYLGAVGPDATP
SSVVYRLSARQRDGTLGQAQFFLLDGGEECFEVDRRSGEVRTTGRPLTPSREYLLRVQAT
DRHGRKGPLATVAILAGYRPPQFTNSTYILNVQENTPVGQPVAVVQAVSFQKKSLSYMLL
VNPGNLFSINQESGGLSLTRTVDYESGHNLHSLQVRASEPDTGLSGVAEVVVQITDENDC
TPEFLHSIYTRDNVPESIAPGTSLLQVLARDCDSGVNSELSYFVHGGDFDITSGGVVSPA
RRLDYERPNHIYEFVVVAVDAGTPPRTGTASVRIRVANSNDEAPVFSQNTYKTFLSEDAG
PDTLVAIVHANDPDGDAVSYAITGGNEDSNFLLDNQKGIIKLRRSPPPRLRGPQYVLNIT
ATDDNASGGPYPLSSSAQVIVGINDINNNKPVFQECQNYSLNAVVLENQPPGTFVLRVQA
HDADIGVNGEVKYGIMQRDGVSSGFDINPDTGVIATAVSFDRERQREFTLSVTATDQAEE
PLIGICQITVLIADQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNSAITYS
LSNQKPAYLHINPTTGWIYVNHPISQTSKINQQIVASDGGNRSSSVELTVIITNVHNQPP
HWEQPEYWVTVPENTVRDAKIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYVKPNRA
DSSASILVAENLDYETTRFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYE
ATVPEGAEIGTSVAQVSATDLDSGLHGMVHYVILKDESGDSQFFSIDSRSGVIVTRASFD
REQKASYLIEVQSQDSSESSRPGQQGQPNTDTAYVRIFITDVNDNAPAFAQPVYEVSVEE
DKEVGFVLITVTANDEDEGANAKLRYQITSGNIMGTFDVEPEVGTIFVAQPLDYEMEQRY
ELRLVASDGKWENETLVVVQVANRNDEAPVFSQTEYHAAVTEELTQLPVFILEVSATDPD
QEADQTALRYSLHGQGAGGEFTIEERTGRIHAQRRLDREERPAWRFLVLATDEGGAGLTG
FADVLLEVQDINDNAPFFPCPALEVDGCFVGQVPENSPADTSVMEMRAMDLDDPNEGKNA
MLTYSIIKNVRNEINLNLFSINASTGTIYTVLRSLDREVEDRYLVVVEARDGGGLAGTGT
ATIMVSDVNDHPPVFTQRLYTTQVREDLEVNSDVLVVSATDGDQGENAVVTFSIVGGDED
RKFFVETDKVNRRGVIKLKKMVDFEKPHERTFNLTLKAEDADFFSLAYCLVQVEDSNDHA
PIFFPQFYESQAMSEDVPVGTIVAQVTASDLDSGQNGHFSYSISKESDPYSQFLVDQSGW
VVVADSLDREKISQHRIMVLATDAGSPPLTGTAIVMVTVLDINDNGPEFEVPYKPVVWEN
TAAPQAVQMNETSLLLHATDRDTSTNGGPFSIRLLMLTSDATNFNLTDFRNGSAAITALR
TFDRERQKEYHLPILMIDSGSPPMSSTSTLTVIIGDRNDHPHSPGHANFIVYSYEGILPT
TVLGQVQSPDLDDWSEKVYRFEGKPSRLFSLNQSSGQLTIREGTPSGSYLLQVRVSDHTW
PDVISTAQVDVRELHQDGLQNAASIRVTNLTVEEFFSGGEESRFSRLGRMLAELLHTLPE
NVQIFSVGDAGQQGEKAINVWFAAHGSPYYKAEKLHGYVAAYKARLEGLLGVSISQVSVD
DCPSTDCSQSGGCSTEVSFSQAPVALSTGNTSLVSLSASSRVRCGCRGREAIHLPCSAYP
TNPCLNGGTCQDGPLGYRCKCPPMFDGPECQQTKHSFGGQGYAWFPPIMPCFQSHISLEF
LAESANGLLLYNGPLGPAHSGEEEDFIAVELRNGVPALSINHGSGTLTLQLPPTSTVSDQ
RWHRLDIISDGKAVQLILDQCGGVAVNELEGVGGDIQEMDESGCRAAGETPGNQRYLNVF
QPLQMGGVKETSPHRRYRSFTGCIRNLVVDSQVYDLASPGESVDSTPGCRLTDGVCVTAA
GPSCGIQASCLADWGSFSCQCHPGYTGHKCDTAVPEFSFDSGSVVRYQLRGGGSSRRTNI
QLLLRTRATSGTLLSVTSREANEYIVLEIMEGHLSVRANLGDGAHALQLPGQRVDIGQWV
LVSLSRHDNLFTLRLEQGGGSREVQAQLGSSREIVVHPASVMVGNSQNAGDKDDFQGCLR
DVRFNGQVLPLDGQSRDLVTVLESRSVTSGCSSDACSGQPCHSPLRCIDLWRKHQCRCPG
GQVTVTEDSGQQRCVPSPCGPSSCQNGGLCQALSPDSYRCRCQEGFRGQRCELGQVRGHR
LAPLSPSSILAISMCLLVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPAEQESWEDIRENI
LNYNEEGGGEQDQNGYDITELKRPLCSSLSQSSSCTTAPLIKSSPGSQEEVHPSGSSCSS
GAPYLSIPHHHHHHHHHHQHATNNNYTSDATYANYTTHVGRDMEASSGGGYVDAPSGSRS
HVDFKSYVARIIWEADNDSEAFAPDAYHVWCVEGSGSSAGSLSSLGSAASRRNVGITHGD
KAEEEEDEDDEGGFVYDRLSRWGPKFQALSEMYDRPQLTLTYRDAVAYIQRSHSHDPLPH
HH
NT seq
8829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctgtaaccggagcggttcttctgcacagcctcctctaccacctgctcccg
ctgctgctgcttcatgcctcaccggtgtgtctgtccgcgcagctcgggcatccagcgcgc
tacttcggacaaatagctgagaactccccggctgggacaccggtggacggggtggtactg
cagctcggagccagcggctgccccggcgcggacctgaatgccagtctgatggggaattac
gcgtcggattttaggctcgttcgctaccgcgggcaccgggatcaccgggggcatctaggt
ttggtctccgccaaagctctggaccgggagtttatagccatgtaccagttgacggtggag
ctgccgcagtgtttgagaagacctgccgccgtccaggtcgaagtgtcggacaagaacgac
aacatcccccagttcaccagcgggaaccagacggtcgaagtgcacgaactgactccgctc
ggtaccgacctggtccgctttgacgcgaaggacggcgacgcggagaggaacggacgggtc
actttttacgcctcaccggagtctcacctgctccacgtggttccacaaaccgggcaggtg
aggctggtcgggtccctccttggtgtcagccaggtgactctgcgcatttacgtgaatgac
ggcggagatgtgtcgctgacaggtgagccggttttcctgcgcatcaacgtccgccgctcc
agcagagcgcggcggaggccccgggctctgtccgaagagctgacctacaccgtgaccgtc
ccggaccacgtcagagtcggggacctagtgtttacggtgccggaccagaggttcgagcag
cggaggttcgaggtgatctccgaggccgactcgccggtccagatcgagcgggactcgggg
cgcctgtacctggcgcgcagcctgggagagcccgccgaggtggtggtgaagatccagaac
ctccgaggtgatgagtggtacctgtgcaggttgactctgagcatgcccagccaggctgac
ctgcagtgggcaatgttcccatcgccttacctgggcgctgtgggtcctgacgccacgccc
agctctgtagtgtaccgactgtccgcacggcagcgagatgggacgcttggacaagcccag
ttcttcctactggacggtggggaggagtgcttcgaggtggatcgtcgctctggtgaggtc
aggaccacaggaagacctctgacccccagtagggagtaccttctgcgggtgcaggccacg
gacaggcatggccgcaaaggtccgctggctacagtggccatcttggctggctaccgaccg
ccgcagtttaccaactccacctacatcctgaacgtgcaggagaacacacctgtcggccaa
cccgtcgcagtggttcaggccgtctccttccagaagaagagtctgtcctacatgctcctg
gtgaatcctgggaatctgttcagcatcaaccaggagagtggagggctcagcctcaccagg
actgtggactatgagagtggacataacctccacagcctgcaggtccgcgcctccgaaccc
gacacaggcctcagcggcgtggcagaggttgtcgtccaaataacagacgagaacgattgc
acacccgagttcctccactccatctacaccagagacaacgtacctgagagcatcgcacct
ggaacctccctgctgcaagttctggcccgggattgtgactccggtgtgaactcagagctg
tcttacttcgttcacggtggcgactttgacatcacatcagggggtgtggtaagccccgcc
cgtcgccttgactatgagcgacccaatcacatctatgagtttgtggtggtcgccgtggat
gcagggactcccccccgcacgggcaccgcctctgtccgcattcgagtcgccaatagcaac
gacgaggcgcccgtcttctcccagaacacttataagaccttcctaagtgaggatgctggt
ccagacacgctggtcgccatcgttcacgccaacgatccggacggagatgccgtctcttac
gctatcactggcggcaatgaggacagcaacttcctgctggacaaccagaagggcatcatc
aagctgcggcggagtccgcctcccaggctcaggggaccgcagtacgttctcaacatcacc
gccacggatgacaacgcgtctggtggaccttacccgctgagcagctctgcccaggtcatc
gtaggaatcaacgacatcaacaacaacaaaccggtcttccaggagtgtcagaactacagt
ctgaacgcagtggtcctggagaaccagccgccagggacgtttgtcctgcgcgtccaggcc
cacgacgctgacattggggtcaacggagaagtcaaatatggcatcatgcagagagacgga
gtgtcgtccgggtttgacatcaatcctgacaccggtgtgatcgccacggcggtgagtttt
gaccgggagcgtcagcgcgagttcacgctgtcggtgacggccacagatcaggctgaggag
ccgctcatcgggatctgtcagatcaccgtcctcatcgccgaccagaacgacaatgacccc
aagtttgaaaacagccgctaccagtacttcctgcgggaggacaccccggtaggaactagt
ttcctgcgagcagcagcacatgatgacgaccaggggagcaactcggccatcacctactcc
ctgtccaatcagaagccagcgtacctgcacatcaaccccactactggctggatttacgtc
aaccaccccatctcacagacgtccaagatcaaccagcagattgtggcgtcagatggaggg
aaccgcagcagctctgtggagctaactgtcataataacaaacgtccacaaccagccgccg
cactgggagcagcccgagtattgggtcaccgtgccagaaaacaccgtacgggacgccaag
atagtgaccatcaaggcgacgtcccctctcggtgacccccgggtgacctacaacctggag
gagggtcaggtcccggagaccaacatgccggtgaggttctacgtcaagccgaaccgggcg
gacagctcggcgtccatcctggtggccgagaacctcgactacgagacaacgcgcttcttc
actctcagagtgcgagtccagaacgtcgcagccgtgccgctcgcatcgttcaccaccgtc
tacgtcaatgtgacagacgtgaacgacaatgttcctttcttcctgtcgtccacctacgag
gccacggttcctgaaggagcagagatcggaacgtctgtggctcaggtgtcggctacagac
ctggactctggtctgcatgggatggtccactatgtgatcctaaaggatgagagcggggac
tctcagttcttcagcatcgactcacgcagcggcgtcatcgtcacgcgagcctccttcgac
cgcgagcagaaagcctcctacctgatcgaggtccagtcgcaggacagctctgagtcgtcc
agaccaggccagcagggacaacctaacaccgacacagcctacgtcaggatcttcatcacc
gacgtcaacgacaacgccccggcgttcgcccagccggtgtacgaggtcagcgtggaggaa
gacaaggaggttggcttcgtcctcatcaccgtcaccgccaacgacgaggacgaaggtgcc
aacgccaagctgcgctaccagatcacctcgggaaacatcatgggcaccttcgacgtggag
cccgaggtgggcaccatatttgtggctcagcctctggactacgagatggagcagcgctac
gagctccggttggtcgcctccgacgggaagtgggagaacgagacgctggtggtggttcag
gtggccaatcgcaacgatgaggcgcccgtctttagccagactgagtaccacgccgccgtg
accgaagagctcacccagctgcctgttttcatcctggaggtgtcagccacagatccagac
caggaggccgaccagactgccctccgctactccctccatggccagggtgctggtggtgag
ttcaccattgaggaacgcactggaagaatccacgcccaacggcgcctggaccgcgaggag
cgcccagcctggagattcctcgtcctcgccacagacgagggaggggccggactcacaggg
tttgctgatgtcctgttagaggtccaagatattaatgacaacgcacccttcttcccgtgt
ccggcactggaagtagacggatgttttgtcggccaagtgcctgaaaattcgcccgccgac
acctccgtcatggagatgcgcgccatggacctggacgaccccaacgagggcaagaacgcc
atgctgacctacagcatcatcaagaatgtccgcaatgaaattaacctcaacctgttctcc
atcaacgctagcacaggcaccatatacacagttctacgttccctggaccgggaggtggag
gaccggtatctggtggtggtggaggccagagatggagggggtttggcgggaacagggaca
gctaccatcatggtttcggatgtcaacgatcacccacctgtcttcactcaaaggctctac
accactcaggtgagagaagacctggaggtgaacagcgacgttcttgtagtttctgctaca
gacggcgatcagggtgagaatgccgtggtaaccttcagcatcgttggtggagacgaagac
aggaagtttttcgtggagacagacaaagtgaaccgacgcggtgtgataaaactgaagaag
atggttgactttgagaagccccacgagaggactttcaatctgaccctgaaggccgaagac
gctgatttcttcagcctggcctactgtctcgttcaggtagaagactccaatgaccatgcg
cccatatttttcccacaattctatgagtcacaagccatgtctgaagatgtacctgtaggg
acaattgttgctcaggttacagcttctgatctggactcgggccaaaatggacacttttct
tacagtatttcaaaagagtcagacccctacagtcagttcctggtggaccagtctggttgg
gtggtggtggccgattctctggacagggagaaaatctcgcagcacaggatcatggtcctc
gccaccgacgctgggagtccacccctgactggcactgccatcgtcatggtaactgtactt
gacattaatgacaatggacccgagtttgaggtcccctataagcctgtcgtttgggagaac
acggcggcaccccaggcagttcagatgaacgaaacctccctcctcctccacgccaccgac
cgggacacctccaccaacggcggccctttctccatacggcttctcatgctcacctcggat
gcaaccaacttcaatttgactgactttcgaaacggcagtgcagccatcactgccctccgg
accttcgaccgcgagcggcagaaggaataccacctcccgatcctcatgattgacagtggc
tcacctccaatgagctccaccagcacgctgacggtcatcattggcgacaggaatgaccac
ccacactcaccaggacacgccaacttcatcgtctacagttatgagggtattctcccgacg
acagtccttggacaagttcaatctcccgaccttgatgactggagtgagaaggtgtaccgg
ttcgaaggcaaaccatccaggctcttcagtctgaaccagagctcaggtcagctcactatc
agggaggggactccttcaggctcgtacctcctgcaagtacgcgtgtcggaccacacctgg
cctgacgttatctccacagctcaggtggacgtcagggagctgcatcaagacggtctgcag
aacgccgcctccattcgtgtgaccaatctgacagtggaggagttttttagcggaggtgag
gagagtcggttctctcgtctgggtcgaatgttggctgaactcctgcacactttgccggaa
aatgtccagatcttctctgtgggcgacgccggccagcagggagagaaggccatcaatgta
tggtttgccgctcacggctcaccgtactacaaggcagagaagctgcacggctacgtggca
gcatacaaagccaggttggagggcctgttgggcgtgtccatctctcaggtgagcgttgat
gactgtccctccacagactgcagtcagtctggaggctgcagcactgaggtttcattcagc
caggccccagtggctctcagcactggtaacacctccctggtgtcgctgtccgcctcatct
agagtgcgatgcggctgccggggcagagaggcaatccacctgccctgctcagcctacccc
accaacccctgcctcaatggtggcacctgccaggacggtccgctgggatacaggtgtaag
tgtcctcccatgtttgatgggcctgagtgccagcagaccaaacacagcttcggtggccag
ggctacgcctggttccctcccatcatgccttgctttcagagccacatctccctggagttc
ctggctgagtcggcaaatgggctgctcctctacaacggtccgctcggccctgcccactct
ggggaggaggaggacttcattgccgtcgagttgagaaacggggttccagctctgagtata
aaccacggatcaggaacgctgaccctgcagctcccgcctacatccactgtctccgaccaa
cgctggcatcgtctcgacatcatcagcgacggaaaggctgtgcagctgatcctggaccag
tgtgggggggtggcagtaaatgagttggaaggcgtcgggggggatatccaggagatggac
gagtctggctgcagagctgcaggagagactccaggaaaccagaggtatctgaatgtcttc
cagcctcttcagatgggaggagtgaaggaaacatctcctcatcgacgttaccgcagtttc
accggctgcatccgcaacctggtggtggacagtcaggtgtacgacctggcgtctccaggt
gagagcgtggacagcacccctgggtgcaggctgacagacggggtgtgtgtgacagcggcc
ggcccctcctgcggcattcaggcctcctgtctcgctgactggggctccttcagctgccag
tgccacccaggatacaccggacacaagtgtgacactgccgtcccagagttctcctttgat
tcgggcagcgttgtgcgttatcagctcagaggaggcgggagctctcgccgcacaaacatc
cagctgctcctccgaaccagggccacctcgggcaccctgctctccgtgacgtcccgggag
gccaacgagtacatcgtcctggagatcatggagggtcacctctctgttcgtgccaacctt
ggtgatggtgcccatgccctgcagctccccggccagcgtgtggacatcgggcagtgggtt
ctggtcagtctcagtcgccatgataacctgttcaccctgcggttggagcagggcgggggc
tcgcgggaggtccaggcccagctggggagcagcagggagatcgtggttcacccggccagc
gtgatggtcgggaacagccagaacgccggagacaaggacgactttcagggctgcctgcgg
gacgttcgttttaacggtcaggtcctgcctctggacgggcagagccgggacttggtgacg
gtgctggagagccggagcgtcacctcggggtgctccagcgatgcctgcagcggccaaccc
tgccacagcccgctgcgctgcatcgacctgtggaggaaacaccagtgcaggtgtcccggc
ggtcaggtgactgtgaccgaagactcaggtcagcagcgttgtgtgccgtcgccctgtgga
ccttcttcctgccaaaacggtggcctctgccaggcgctgtcgcccgacagctaccggtgc
cggtgccaggaggggttcaggggtcagcgctgtgagctggggcaggtcagaggtcaccgg
ctggcccccctcagccccagctccatcctggcaatcagcatgtgtctgctcgtcttcttc
gcggtgctggtggcggtaacagtgtggaaccagaaaggcagccgtaacaagttcaggaag
cgaggagtttaccatatccccgctgaacaagagagctgggaggacatccgagaaaacatc
ctcaactacaacgaggaaggaggcggcgagcaagaccagaacggctacgacatcacagag
ttgaagcgtccgctgtgctccagtttgtcccagtcctcgtcctgcaccaccgccccgctc
atcaagtcctcacccggctcccaggaggaagtccacccgtcgggctcctcctgcagctca
ggcgctccctacctcagcatcccgcatcaccaccatcaccaccatcatcatcatcaacac
gccaccaacaacaactacaccagcgacgcgacctacgctaactacaccactcatgtaggc
cgggatatggaggcgagcagcggaggtggctatgtggacgccccttcagggtctcgctcc
cacgtggactttaaaagctacgtggcacgaatcatctgggaggcggacaacgacagcgag
gcgttcgcgcctgacgcgtaccacgtgtggtgcgtggaaggctcggggtcgtcagcaggg
agcctcagctcgctggggtctgcagcgtcacgtagaaacgttggcatcacccatggcgac
aaggcggaggaggaggaggacgaagacgatgaaggagggtttgtttacgacaggctgtcg
cggtggggccccaagttccaggcactgagcgagatgtacgaccggccccagctgaccctc
acgtacagggacgcagtggcctacatacagaggagccacagccacgacccgctgcctcat
caccactag
DBGET
integrated database retrieval system