Micropterus salmoides (largemouth bass): 119897013
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Entry
119897013 CDS
T07309
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119897013 (lingo4b)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119897013 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
LRR_9
LRR_14
Ig_2
ig
V-set
LRR_Zer-1
LRRNT
C2-set_2
Ig_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119897013
NCBI-ProteinID:
XP_038566449
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MFVESIVQWGAWSILLQFVLGVSAGGCPPRCVCRPEAKEVICSAKHLNSVPEGFSSDARR
LDLSHNKIKTVGRRQFSGLLQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRFLDLSQNEILVFLDYTFKEMVNLQTLEAKENDLVFISQRAFFGLQNLQE
LNIDRSNLTSIPTEALSQLQSLTNLCMLRLTISTLPNNAFRRLHRLRSLLIANWPALDTV
ASNSLIGLNLTSLVISSCNLSAIPYSALRHLVYLRFLDLSYNPITVIQGNLLGDLLRLQE
LHLAGGSLLRIEPGAFRGLAYFRMLNVTSNQLTTLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCSSPDAVRQREFRDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVIFSCKADGDPVPSITWISSHKNVVSPTGRIRVLLNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEDWAEPSNPQAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGGEGGDGGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcaatcgtccagtggggggcatggagcatcctgctccagtttgtactg
ggtgtatctgcaggaggatgtcctccacgctgtgtgtgtcgacctgaggctaaagaagtg
atctgctctgccaaacatttgaactcagtgccagagggattttccagtgatgccaggcgt
ttggatttatcccacaataagattaagactgtggggcgccgccagttctctggcctcttg
caacttcaagagttggatctcagtgataatataatctctatgattgaggtggaggctttc
cagggcctacagaatctcaggacgcttcggattaagaataaccgacttaagattatccca
gttggggtgttttctggcttgtccagtctgcgctttctggatctgagtcagaatgagatt
ctggtcttcctggactataccttcaaagaaatggtaaacctgcaaacccttgaagccaag
gagaatgacttggtcttcatctcccagcgggctttctttggtctgcagaatctgcaggag
ctcaacatagaccggagcaacttgacctccattcccacagaggcattgtcccagctccag
agcctgacaaatctttgcatgctacgcctcaccatttctacactgcccaacaatgctttc
cgacgactccatcgcctgcgtagcctcctgattgcaaactggccagcactggacactgtg
gccagcaacagcctgataggtcttaacttgacctcacttgtcatcagtagctgcaaccta
agtgctattccttactcagcacttcgtcacctggtgtatctgcgcttcctggatctgtcc
tacaaccccatcactgttatccaaggtaatctactaggagatctcctgagactccaggag
ttacacctagcaggtgggagcttgctacgaatagaacctggggcctttaggggactggcc
tactttcgcatgcttaatgtgacatccaatcagcttactactttggaagagagtgtgttc
cactctgtggggaaccttcaggtgttgcggttggatgggaatcccttagcatgtgactgc
cggctcctctgggtggtccgccgccgtttgcgcttgaactttgatggacatcagcccact
tgttcgtctcctgatgcggtgaggcagcgtgaattcagagacttctccgagaaggagctc
ccgaggctgtttacctgccgccctgctcgtatcatggaccgcaggccacaggaggcgaga
gtagaggagggcactacagttatcttctcctgtaaagctgatggggatccagttccatct
atcacgtggatctcatctcataagaatgtggtttctccaacaggacgaatcagagttttg
ctcaatggcactctagaagttcgttttgcccaagttcaggacagtggaacgtatcagtgc
ttggcgggcaatgcagccggcaatgacagcctgactgttggtctgtatgttaaggggctt
cctcgtaaccgaaccatcccattcttctcagaggaagactgggcagagccttcaaatccc
caagctgccaactcctcagctcaaatggccaagccatacccgtttgacgcaaagaccctg
attattgccaccaccatgggcttcctgtctttccttagctcggtggccatctgttttgtt
tttatgttcttctggagccagagcaaaggtcagatcaagcacacagcaactattgacttt
gttcctcggtcttccatgggtggaggaggaggggagggaggtgatggtggcaggttcacc
atgaaacttatttaa
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