Micropterus salmoides (largemouth bass): 119897078
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Entry
119897078 CDS
T07309
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119897078 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119897078 (nr1d2a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119897078 (nr1d2a)
Nuclear receptors [BR:
msam03310
]
1. Thyroid hormone like
1D. Rev-Erb
119897078 (nr1d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119897078
NCBI-ProteinID:
XP_038566553
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MPEEVGTAKPGGVIAYISSGSASSPESCMTTTPSSGYLSTSPTLPRPSLPSRAVGMVVDI
SPPGKNGHQRGHGTEKAGRSSTSTKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSNNSQLHGMLHGHQSSSLPMEAMTNDVSSSASSASSSSDSLSCSNP
SSPQCPQDSESVVSMDTNSSSASSCASDSGEDEAVVTVSRQHQDAFAFSQQRSPRQSQAS
PSPVTGALETPCNSRMEEQQESWNCWNRNVVVRGYQHNSNSQHITNTAYREEGGVYQQQP
QQQRPNSTPSCEPSEDSQRQHEFNTQTASSGYSGPTNYMNNRAHLVCPMNTSPYVDPCKP
SQEIWEEFSMSFTPAVREVVDFAKRIPGFCDLPERDQVSLLKAGTFEVLMVRFASLFNMV
EQTVTFLSGKRYSLDTLRSLGAGELLNSMCEFSEKLAALQLDSEEMSLFTAVVLVSADRS
GIQDLNSVEALQDKLIRALRNQVIQNHGDEASTTFTKLLLKLPELRSLNNMHSEELLSFR
VHP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggaagttggaacagccaagccaggaggagtcattgcctatatttcctctggc
tctgcctccagcccagagtcctgtatgaccaccacccccagcagtggctacctgtcgaca
tcaccaactttgccccgcccctcgctgcccagcagggccgtgggcatggtggtggatatc
tctccaccgggcaagaatggccaccagcgtggccacggcacggagaaggccgggcgctcc
tccacatccaccaagagcagcatcaccaaaatcaatggcatggtgctgttgtgcaaggtt
tgtggtgatgtggcctcaggtttccactatggcgtccatgcttgcgaaggctgcaagggc
ttcttcagaagaagcatccagcagaacatccagtacaagaagtgtcttaagatggagaac
tgcaccatcatgaggatcaacaggaatcgctgccagcagtgtcggttcaagaagtgtctg
tctgtcggcatgtccagagatgctgtccgatttggccgcatcccaaagcgggaaaagcag
aggatgctgctggagatgcagaacgccatgaacaacatgatgagcaacaacagccagctg
cacggcatgctgcacggccaccagagctcgtcactgcccatggaggccatgaccaacgat
gtcagctcttctgcctcttcagcctcctcttcttctgattccctgtcgtgctccaaccct
tcctccccgcagtgcccccaggactcagagtctgtggtttccatggacaccaactccagc
tctgcttcctcctgcgcatcagacagcggcgaggacgaggccgtcgttacagtgagcagg
caacatcaagatgcctttgcgtttagccagcagaggtcaccaagacagagccaggcctct
ccctcgccggtcactggcgccctggagacgccgtgcaacagccgcatggaggagcaacag
gagagctggaactgctggaatcgcaatgtggttgtgagaggttaccagcacaattctaac
agtcagcacatcaccaacactgcttacagggaggaggggggagtttaccagcagcagcct
cagcagcagcggcctaacagcactcctagctgtgaaccatcagaagacagccaaagacag
catgagtttaacacacaaactgcctcaagtggttatagtggaccaaccaactacatgaat
aatagagcacacttggtctgtccgatgaacacatcaccctacgtggatccctgcaagccg
agccaggagatctgggaggagttctccatgagctttacccccgccgtgcgggaggtggtc
gacttcgccaagaggatcccaggcttctgcgacctccccgagcgcgaccaagtcagcctg
ctcaaagctggaacttttgaggtgctgatggtccgattcgcgtccctgttcaatatggtg
gagcagacggtgaccttcttgagcggcaagcgctacagccttgacacgctacggtcgctg
ggcgccggcgagctgctcaactctatgtgcgagttcagcgagaagctggcagcgctgcaa
ctcgactcggaggaaatgagcctgttcacagccgtggtgctcgtctcagccgatcgctca
gggatccaggacctaaactcagttgaggccctgcaggacaaactgatccgggcactgcga
aaccaggtgatacagaaccacggcgacgaggcgtccaccaccttcaccaagctgctgctc
aagcttcccgagctgcgttcactcaacaacatgcactcagaggaactgctctccttcaga
gttcacccttaa
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